MGE detailed information
MGE type: Mobilizable plasmid MGE length: 74050 bp
Accession: NZ_CP116408 Location: 1..74050 Organism: Escherichia coli strain HH107 Replicon: plasmid pHH107-3
Accession: NZ_CP116408 Location: 1..74050 Organism: Escherichia coli strain HH107 Replicon: plasmid pHH107-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PL328_RS24560 (PL328_24560) | 1..1011 | + | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| PL328_RS24565 (PL328_24565) | 1478..2458 | + | 981 | Protein_1 | IS5 family transposase ISKpn26 | Transposase |
| PL328_RS24570 (PL328_24570) | 2928..3668 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| PL328_RS24575 (PL328_24575) | 4000..4330 | - | 331 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PL328_RS24580 (PL328_24580) | 4317..4481 | - | 165 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| PL328_RS24585 (PL328_24585) | 4545..5707 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| PL328_RS24590 (PL328_24590) | 6057..6866 | - | 810 | WP_000654269.1 | hypothetical protein | - |
| PL328_RS24595 (PL328_24595) | 6884..7246 | - | 363 | WP_000533745.1 | hypothetical protein | - |
| PL328_RS24600 (PL328_24600) | 7932..10553 | + | 2622 | WP_016156502.1 | hypothetical protein | - |
| PL328_RS24605 (PL328_24605) | 10920..13127 | - | 2208 | WP_016156503.1 | hypothetical protein | - |
| PL328_RS24610 (PL328_24610) | 13254..13694 | - | 441 | WP_016156504.1 | hypothetical protein | - |
| PL328_RS24615 (PL328_24615) | 13779..14102 | - | 324 | Protein_11 | IS3 family transposase ISBcen15 | Transposase |
| PL328_RS24620 (PL328_24620) | 14127..14414 | - | 288 | Protein_12 | IS3 family transposase ISBcen15 | Transposase |
| PL328_RS24625 (PL328_24625) | 14582..15278 | + | 697 | WP_223228875.1 | IS1 family transposase | - |
| PL328_RS24630 (PL328_24630) | 15290..15355 | - | 66 | Protein_14 | galactoside O-acetyltransferase | - |
| PL328_RS24635 (PL328_24635) | 15421..16674 | - | 1254 | WP_003846917.1 | lactose permease | - |
| PL328_RS24640 (PL328_24640) | 16726..19800 | - | 3075 | WP_016156506.1 | beta-galactosidase | - |
| PL328_RS24645 (PL328_24645) | 19922..21004 | - | 1083 | WP_024241646.1 | DNA-binding transcriptional repressor LacI | - |
| PL328_RS24650 (PL328_24650) | 21040..21122 | - | 83 | Protein_18 | hypothetical protein | - |
| PL328_RS24655 (PL328_24655) | 21361..22059 | - | 699 | Protein_19 | arsenical resistance protein ArsH | - |
| PL328_RS24660 (PL328_24660) | 22145..22465 | + | 321 | WP_004206577.1 | transcriptional regulator | - |
| PL328_RS24665 (PL328_24665) | 22510..23799 | + | 1290 | WP_007898880.1 | arsenic transporter | - |
| PL328_RS24670 (PL328_24670) | 23812..24237 | + | 426 | WP_007898882.1 | glutaredoxin-dependent arsenate reductase | - |
| PL328_RS24675 (PL328_24675) | 24351..24629 | + | 279 | WP_004118253.1 | EAL domain-containing protein | - |
| PL328_RS24680 (PL328_24680) | 24658..24910 | - | 253 | Protein_24 | IS66 family transposase | - |
| PL328_RS24685 (PL328_24685) | 24960..25253 | - | 294 | WP_016156511.1 | IS66 family transposase ISSgsp1 | Transposase |
| PL328_RS24690 (PL328_24690) | 25352..26119 | - | 768 | WP_004152282.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| PL328_RS24695 (PL328_24695) | 26120..27076 | - | 957 | WP_004118246.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| PL328_RS24700 (PL328_24700) | 27073..28071 | - | 999 | WP_180385270.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| PL328_RS24705 (PL328_24705) | 28068..28970 | - | 903 | WP_000879160.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| PL328_RS24710 (PL328_24710) | 29015..31339 | - | 2325 | WP_000188276.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| PL328_RS24715 (PL328_24715) | 31426..32379 | - | 954 | WP_044061592.1 | ferric citrate uptake sigma factor regulator FecR | - |
| PL328_RS24720 (PL328_24720) | 32376..32897 | - | 522 | WP_016151347.1 | putative RNA polymerase sigma factor FecI | VF |
| PL328_RS24725 (PL328_24725) | 33034..33103 | + | 70 | Protein_33 | hypothetical protein | - |
| PL328_RS24735 (PL328_24735) | 34073..35041 | + | 969 | WP_016156514.1 | IS5 family transposase IS903B | Transposase |
| PL328_RS24740 (PL328_24740) | 35504..37813 | + | 2310 | WP_029404135.1 | TerB N-terminal domain-containing protein | - |
| PL328_RS24745 (PL328_24745) | 37817..39133 | + | 1317 | WP_004152291.1 | ATP-binding protein | - |
| PL328_RS24750 (PL328_24750) | 39130..41325 | + | 2196 | WP_000093087.1 | DEAD/DEAH box helicase | - |
| PL328_RS24755 (PL328_24755) | 41660..42898 | - | 1239 | WP_015060485.1 | IS110 family transposase ISCps4 | Transposase |
| PL328_RS24765 (PL328_24765) | 44809..45269 | - | 461 | Protein_41 | IS1 family transposase IS1X4 | Transposase |
| PL328_RS24770 (PL328_24770) | 45538..46293 | - | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| PL328_RS24775 (PL328_24775) | 46827..46925 | + | 99 | Protein_43 | IS1 family transposase | - |
| PL328_RS24780 (PL328_24780) | 47212..48234 | - | 1023 | WP_016156516.1 | IS110 family transposase IS1618 | Transposase |
| PL328_RS24785 (PL328_24785) | 48453..49433 | + | 981 | WP_021570610.1 | IS5 family transposase ISKpn26 | Transposase |
| PL328_RS24790 (PL328_24790) | 49543..51069 | - | 1527 | WP_231392227.1 | diguanylate cyclase | - |
| PL328_RS24795 (PL328_24795) | 51217..52337 | - | 1121 | Protein_47 | IS3-like element ISSen4 family transposase | - |
| PL328_RS24800 (PL328_24800) | 52590..53015 | + | 426 | WP_016156520.1 | hypothetical protein | - |
| PL328_RS24805 (PL328_24805) | 53265..53486 | - | 222 | WP_001124949.1 | hypothetical protein | - |
| PL328_RS24810 (PL328_24810) | 53946..54014 | + | 69 | WP_228636870.1 | DUF4113 domain-containing protein | - |
| PL328_RS24815 (PL328_24815) | 54061..54840 | - | 780 | WP_225623106.1 | DsbA family protein | - |
| PL328_RS24820 (PL328_24820) | 54975..55445 | + | 471 | WP_016156522.1 | hypothetical protein | - |
| PL328_RS24825 (PL328_24825) | 55474..56171 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| PL328_RS24830 (PL328_24830) | 56282..57082 | - | 801 | WP_001515712.1 | hypothetical protein | - |
| PL328_RS24835 (PL328_24835) | 57796..58281 | + | 486 | WP_000045622.1 | conjugative transfer protein MobI(A/C) | - |
| PL328_RS24840 (PL328_24840) | 58278..58643 | + | 366 | WP_001515713.1 | hypothetical protein | - |
| PL328_RS24845 (PL328_24845) | 58744..59724 | - | 981 | WP_016236480.1 | IS5 family transposase ISKpn26 | Transposase |
| PL328_RS24850 (PL328_24850) | 59957..60106 | + | 150 | WP_232482723.1 | recombinase family protein | - |
| PL328_RS24855 (PL328_24855) | 60153..60857 | + | 705 | WP_061872725.1 | IS6 family transposase IS15DI | Transposase |
| PL328_RS24860 (PL328_24860) | 60994..61806 | + | 813 | WP_265894992.1 | hypothetical protein | - |
| PL328_RS24865 (PL328_24865) | 61843..62262 | - | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PL328_RS24870 (PL328_24870) | 62259..62570 | - | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| PL328_RS24875 (PL328_24875) | 62800..65808 | - | 3009 | WP_000718520.1 | Tn3 family transposase ISEc63 | Transposase |
| PL328_RS24880 (PL328_24880) | 65967..66128 | + | 162 | Protein_64 | recombinase family protein | - |
| PL328_RS24885 (PL328_24885) | 66182..66886 | - | 705 | WP_061872725.1 | IS6 family transposase IS15DI | Transposase |
| PL328_RS24890 (PL328_24890) | 66877..68181 | + | 1305 | WP_227164542.1 | Y-family DNA polymerase | - |
| PL328_RS24895 (PL328_24895) | 68260..68511 | + | 252 | WP_004118488.1 | plasmid stabilization protein | - |
| PL328_RS24900 (PL328_24900) | 68565..68870 | + | 306 | WP_016156495.1 | hypothetical protein | - |
| PL328_RS24905 (PL328_24905) | 69981..70952 | - | 972 | WP_016156498.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PL328_RS24910 (PL328_24910) | 70952..72118 | - | 1167 | WP_000523813.1 | hypothetical protein | VF |
| PL328_RS24915 (PL328_24915) | 72515..73725 | + | 1211 | WP_180385224.1 | IS3 family transposase ISEc25 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|