MGE detailed information
MGE type: Genomic_island MGE length: 43986 bp
Accession: NZ_CP116405 Location: 928697..972682 Organism: Escherichia coli strain HH107 Replicon: chromosome
Accession: NZ_CP116405 Location: 928697..972682 Organism: Escherichia coli strain HH107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PL328_RS04450 (924024) | 924024..924902 | - | 879 | WP_000459171.1 | xanthine dehydrogenase FAD-binding subunit XdhB | - |
| PL328_RS04455 (924913) | 924913..927210 | - | 2298 | WP_000388150.1 | xanthine dehydrogenase molybdenum-binding subunit XdhA | - |
| PL328_RS04460 (927625) | 927625..928380 | + | 756 | WP_001301085.1 | amidase activator ActS | - |
| PL328_RS04470 (928697) | 928697..929890 | + | 1194 | WP_000778549.1 | Prophage integrase IntS ; Integrase | Integrase |
| PL328_RS04475 (930097) | 930097..931245 | + | 1149 | WP_000460992.1 | SIR2 family protein | - |
| PL328_RS04480 (931242) | 931242..933017 | + | 1776 | WP_000022894.1 | ATP-binding protein | - |
| PL328_RS04485 (933210) | 933210..933563 | + | 354 | WP_001135895.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| PL328_RS04490 (933611) | 933611..933973 | + | 363 | WP_000855179.1 | arsenite efflux transporter metallochaperone ArsD | - |
| PL328_RS04495 (933991) | 933991..935742 | + | 1752 | WP_016538087.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| PL328_RS04500 (935789) | 935789..937078 | + | 1290 | WP_016538086.1 | arsenite efflux transporter membrane subunit ArsB | - |
| PL328_RS04505 (937091) | 937091..937516 | + | 426 | WP_000065761.1 | glutaredoxin-dependent arsenate reductase | - |
| PL328_RS04510 (937547) | 937547..939304 | - | 1758 | WP_001057013.1 | Arsenical pump-driving ATPase | VF |
| PL328_RS04515 (939325) | 939325..939687 | - | 363 | WP_000034287.1 | arsenic metallochaperone ArsD family protein | - |
| PL328_RS04520 (939763) | 939763..940308 | - | 546 | WP_001286343.1 | sigma-70 family RNA polymerase sigma factor | - |
| PL328_RS04525 (940317) | 940317..941030 | - | 714 | WP_000145398.1 | arsenical resistance protein ArsH | - |
| PL328_RS04530 (941032) | 941032..941355 | - | 324 | WP_000423544.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PL328_RS04535 (941541) | 941541..942116 | - | 576 | WP_000665320.1 | hypothetical protein | - |
| PL328_RS04540 (942219) | 942219..942425 | - | 207 | WP_000985661.1 | helix-turn-helix domain-containing protein | - |
| PL328_RS04545 (942529) | 942529..943110 | - | 582 | WP_000347296.1 | inovirus-type Gp2 protein | - |
| PL328_RS04550 (943489) | 943489..944286 | + | 798 | WP_000003883.1 | hypothetical protein | - |
| PL328_RS04555 (944519) | 944519..944761 | - | 243 | Protein_894 | cytochrome b/b6 domain-containing protein | - |
| PL328_RS04560 (944733) | 944733..944885 | - | 153 | WP_156123960.1 | hypothetical protein | - |
| PL328_RS04565 (945400) | 945400..945972 | + | 573 | WP_001515348.1 | cytochrome b/b6 domain-containing protein | - |
| PL328_RS04570 (946172) | 946172..947095 | + | 924 | WP_000167917.1 | cation diffusion facilitator family transporter | - |
| PL328_RS04575 (947359) | 947359..948222 | + | 864 | WP_001071225.1 | GTPase family protein | - |
| PL328_RS04580 (948317) | 948317..949141 | + | 825 | WP_000197385.1 | DUF932 domain-containing protein | - |
| PL328_RS04585 (949350) | 949350..950060 | + | 711 | WP_024198336.1 | hypothetical protein | - |
| PL328_RS04590 (950086) | 950086..950622 | + | 537 | WP_000219797.1 | DUF4339 domain-containing protein | - |
| PL328_RS04595 (950664) | 950664..951101 | + | 438 | WP_024198335.1 | hypothetical protein | - |
| PL328_RS04600 (951168) | 951168..951578 | + | 411 | WP_000912997.1 | hypothetical protein | - |
| PL328_RS04605 (951656) | 951656..951892 | + | 237 | WP_000004273.1 | DUF905 domain-containing protein | - |
| PL328_RS04610 (951978) | 951978..952436 | + | 459 | WP_016538084.1 | antirestriction protein | - |
| PL328_RS04615 (952452) | 952452..952928 | + | 477 | WP_000811694.1 | RadC family protein | - |
| PL328_RS04620 (952937) | 952937..953158 | + | 222 | WP_000691995.1 | DUF987 domain-containing protein | - |
| PL328_RS04625 (953177) | 953177..953494 | + | 318 | WP_000065326.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PL328_RS04630 (953515) | 953515..953838 | + | 324 | WP_000698542.1 | TA system toxin CbtA family protein | Toxin Detail |
| PL328_RS04635 (954280) | 954280..955890 | + | 1611 | WP_123056634.1 | glycoside hydrolase family 15 protein | - |
| PL328_RS04640 (955982) | 955982..956969 | + | 988 | Protein_911 | Surface presentation of antigens protein SpaO | VF |
| PL328_RS04645 (956959) | 956959..957624 | + | 666 | WP_102595935.1 | Surface presentation of antigens protein SpaP | VF |
| PL328_RS04650 (957634) | 957634..957894 | + | 261 | WP_000341004.1 | Surface presentation of antigens protein SpaQ | VF |
| PL328_RS04655 (957896) | 957896..958663 | + | 768 | WP_085381318.1 | Surface presentation of antigens protein SpaR | VF |
| PL328_RS04660 (958672) | 958672..959794 | + | 1123 | Protein_915 | hypothetical protein | VF |
| PL328_RS04665 (959856) | 959856..960149 | - | 294 | WP_000060559.1 | hypothetical protein | VF |
| PL328_RS04670 (960151) | 960151..960651 | - | 501 | WP_047084953.1 | LuxR C-terminal-related transcriptional regulator | - |
| PL328_RS04675 (960909) | 960909..962090 | + | 1182 | WP_001365813.1 | PrgH/EprH family type III secretion apparatus protein | - |
| PL328_RS04680 (962104) | 962104..962344 | + | 241 | Protein_919 | hypothetical protein | VF |
| PL328_RS04685 (962421) | 962421..962695 | + | 275 | Protein_920 | type III secretion system inner rod subunit SctI | - |
| PL328_RS04690 (962692) | 962692..963426 | + | 735 | WP_000875234.1 | Lipoprotein PrgK | VF |
| PL328_RS04695 (963442) | 963442..964023 | + | 582 | WP_001341846.1 | type III secretion apparatus protein OrgA/MxiK | - |
| PL328_RS04700 (964240) | 964240..964671 | + | 432 | WP_047084939.1 | hypothetical protein | - |
| PL328_RS04705 (964892) | 964892..965524 | + | 633 | Protein_924 | putative response regulatory protein YgeK | VF |
| PL328_RS04710 (965569) | 965569..966045 | - | 477 | WP_180385172.1 | hypothetical protein | VF |
| PL328_RS04715 (966128) | 966128..966346 | - | 219 | WP_000184091.1 | protein YgeI | - |
| PL328_RS04720 (966514) | 966514..967890 | - | 1377 | WP_000362702.1 | HilA family transcriptional regulator YgeH | - |
| PL328_RS04725 (968225) | 968225..968716 | - | 492 | WP_000102786.1 | Chaperone protein SicA | VF |
| PL328_RS04730 (968940) | 968940..969429 | - | 490 | Protein_929 | hypothetical protein | - |
| PL328_RS04735 (969859) | 969859..970284 | + | 426 | WP_000350612.1 | protein YqeK | - |
| PL328_RS04740 (970320) | 970320..970400 | + | 81 | WP_000655821.1 | hypothetical protein | - |
| PL328_RS04745 (970433) | 970433..970885 | - | 453 | WP_081178192.1 | protein YqeJ | - |
| PL328_RS04750 (970907) | 970907..971716 | - | 810 | WP_001295154.1 | transcriptional regulator | - |
| PL328_RS04755 (972050) | 972050..972682 | - | 633 | WP_001305805.1 | helix-turn-helix transcriptional regulator | - |
| PL328_RS04760 (973142) | 973142..974371 | - | 1230 | WP_044864026.1 | amino acid permease | - |
| PL328_RS04765 (974626) | 974626..975807 | + | 1182 | WP_000656029.1 | acetyl-CoA C-acetyltransferase | - |
| PL328_RS04770 (976094) | 976094..976930 | + | 837 | WP_044864025.1 | 5-dehydro-4-deoxy-D-glucuronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|