MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 34258 bp
Accession: NZ_CP116342 Location: 1565588..1599845 Organism: Neisseria gonorrhoeae strain SE690. Replicon: chromosome
Accession: NZ_CP116342 Location: 1565588..1599845 Organism: Neisseria gonorrhoeae strain SE690. Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PH604_RS08045 (PH604_08015) | 1561043..1562461 | - | 1419 | WP_003697465.1 | type I glutamate--ammonia ligase | - |
| PH604_RS08050 (PH604_08020) | 1562773..1563582 | + | 810 | WP_003689536.1 | shikimate dehydrogenase | - |
| PH604_RS08055 (PH604_08025) | 1563585..1564286 | + | 702 | WP_003689538.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| PH604_RS08065 (PH604_08035) | 1564826..1565560 | - | 735 | WP_003689540.1 | LPS export ABC transporter ATP-binding protein | - |
| PH604_RS08070 (PH604_08040) | 1565631..1566161 | - | 531 | WP_003689542.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| PH604_RS08075 (PH604_08045) | 1566142..1566723 | - | 582 | WP_003695504.1 | LPS export ABC transporter periplasmic protein LptC | - |
| PH604_RS08080 (PH604_08050) | 1566720..1567256 | - | 537 | WP_003689546.1 | HAD family hydrolase | - |
| PH604_RS08085 (PH604_08055) | 1567322..1568296 | - | 975 | WP_003689550.1 | Arabinose 5-phosphate isomerase KdsD | VF |
| PH604_RS08090 (PH604_08060) | 1568393..1569448 | + | 1056 | WP_003689551.1 | transaldolase | - |
| PH604_RS08095 (PH604_08065) | 1569460..1569594 | + | 135 | WP_003703570.1 | hypothetical protein | - |
| PH604_RS08100 (PH604_08070) | 1569599..1569889 | + | 291 | WP_003689553.1 | hypothetical protein | - |
| PH604_RS08105 (PH604_08075) | 1569906..1570793 | + | 888 | WP_003689554.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| PH604_RS08110 (PH604_08080) | 1570863..1571879 | - | 1017 | WP_003689555.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| PH604_RS08115 (PH604_08085) | 1571999..1573153 | + | 1155 | WP_003697468.1 | hypothetical protein ; Integrase | Integrase |
| PH604_RS08120 (PH604_08090) | 1573203..1573469 | - | 267 | WP_003689557.1 | pyocin activator PrtN family protein | - |
| PH604_RS08125 (PH604_08095) | 1573577..1574725 | - | 1149 | WP_115176891.1 | SAM-dependent methyltransferase | - |
| PH604_RS08130 (PH604_08100) | 1574722..1575705 | - | 984 | WP_050171065.1 | hypothetical protein | - |
| PH604_RS08135 (PH604_08105) | 1575816..1576031 | - | 216 | WP_003691538.1 | hypothetical protein | - |
| PH604_RS08140 (PH604_08110) | 1576083..1576574 | - | 492 | WP_017147227.1 | siphovirus Gp157 family protein | - |
| PH604_RS08145 (PH604_08115) | 1576571..1576753 | - | 183 | WP_003691535.1 | hypothetical protein | - |
| PH604_RS08150 (PH604_08120) | 1576893..1577579 | - | 687 | WP_033910330.1 | hypothetical protein | - |
| PH604_RS08155 (PH604_08125) | 1577648..1577809 | - | 162 | WP_004464809.1 | hypothetical protein | - |
| PH604_RS08160 (PH604_08130) | 1577806..1578081 | - | 276 | WP_010359972.1 | hypothetical protein | - |
| PH604_RS08165 (PH604_08135) | 1578234..1578566 | - | 333 | WP_047919601.1 | phage associated protein | - |
| PH604_RS08170 (PH604_08140) | 1578707..1578982 | - | 276 | WP_192212651.1 | hypothetical protein | - |
| PH604_RS08175 (PH604_08145) | 1578979..1579455 | - | 477 | WP_002255718.1 | hypothetical protein | - |
| PH604_RS08180 (PH604_08150) | 1579488..1579688 | - | 201 | WP_048654497.1 | hypothetical protein | - |
| PH604_RS08185 (PH604_08155) | 1579899..1580660 | + | 762 | WP_012503753.1 | hypothetical protein | - |
| PH604_RS08190 (PH604_08160) | 1580759..1581160 | - | 402 | WP_003691454.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PH604_RS08195 (PH604_08165) | 1581262..1581444 | - | 183 | WP_003689143.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PH604_RS08200 (PH604_08170) | 1581614..1582432 | - | 819 | WP_012503752.1 | DUF3037 domain-containing protein | - |
| PH604_RS08205 (PH604_08175) | 1582429..1583127 | - | 699 | WP_003689139.1 | hypothetical protein | - |
| PH604_RS08210 (PH604_08180) | 1583366..1584076 | - | 711 | WP_050161643.1 | helix-turn-helix transcriptional regulator | - |
| PH604_RS08215 (PH604_08185) | 1584192..1584380 | + | 189 | WP_003689136.1 | helix-turn-helix domain-containing protein | - |
| PH604_RS08220 (PH604_08190) | 1584460..1584615 | + | 156 | WP_003691446.1 | hypothetical protein | - |
| PH604_RS08225 (PH604_08195) | 1584592..1584780 | - | 189 | WP_003706568.1 | hypothetical protein | - |
| PH604_RS08230 (PH604_08200) | 1584953..1585180 | + | 228 | WP_003698261.1 | helix-turn-helix domain-containing protein | - |
| PH604_RS08235 (PH604_08205) | 1585298..1586362 | + | 1065 | WP_003689134.1 | hypothetical protein | - |
| PH604_RS08240 (PH604_08210) | 1586359..1587720 | + | 1362 | WP_050161657.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| PH604_RS08245 (PH604_08215) | 1587737..1587967 | + | 231 | WP_115095430.1 | hypothetical protein | - |
| PH604_RS08250 (PH604_08220) | 1588059..1588553 | + | 495 | WP_047923242.1 | DUF3310 domain-containing protein | - |
| PH604_RS08255 (PH604_08225) | 1588730..1588879 | + | 150 | WP_003689110.1 | hypothetical protein | - |
| PH604_RS08260 (PH604_08230) | 1588908..1589189 | + | 282 | WP_003689109.1 | hypothetical protein | - |
| PH604_RS08265 (PH604_08235) | 1589180..1589560 | + | 381 | WP_033910829.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PH604_RS08270 (PH604_08245) | 1589889..1590851 | - | 963 | WP_202838286.1 | IS110 family transposase ISNgo2 | Transposase |
| PH604_RS08275 (PH604_08250) | 1591365..1591724 | - | 360 | WP_003689732.1 | hypothetical protein | - |
| PH604_RS08280 (PH604_08255) | 1591845..1592932 | - | 1088 | Protein_1612 | zonular occludens toxin domain-containing protein | - |
| PH604_RS08285 (PH604_08260) | 1592942..1593232 | - | 291 | WP_047917922.1 | DUF2523 domain-containing protein | - |
| PH604_RS08290 (PH604_08265) | 1593211..1594800 | - | 1590 | WP_202838264.1 | IgG-binding virulence factor TspB family protein | - |
| PH604_RS08295 (PH604_08270) | 1594742..1595059 | - | 318 | WP_003689167.1 | DUF1132 family protein | - |
| PH604_RS08300 (PH604_08275) | 1595187..1595465 | - | 279 | WP_003691583.1 | hypothetical protein | - |
| PH604_RS08305 (PH604_08280) | 1595472..1595690 | - | 219 | WP_003691584.1 | major capsid protein | - |
| PH604_RS08310 (PH604_08285) | 1595776..1595979 | - | 204 | WP_003689736.1 | hypothetical protein | - |
| PH604_RS08315 (PH604_08290) | 1595993..1596304 | - | 312 | WP_003689737.1 | hypothetical protein | - |
| PH604_RS08320 (PH604_08295) | 1596318..1597604 | - | 1287 | WP_047917866.1 | replication initiation factor domain-containing protein | - |
| PH604_RS08325 (PH604_08300) | 1597633..1597857 | - | 225 | WP_003689739.1 | hypothetical protein | - |
| PH604_RS08330 (PH604_08305) | 1598253..1598459 | - | 207 | WP_003689742.1 | DUF2788 domain-containing protein | - |
| PH604_RS08335 (PH604_08310) | 1598554..1599723 | - | 1170 | WP_003689744.1 | O-succinylhomoserine sulfhydrylase | - |
| PH604_RS08340 (PH604_08315) | 1599869..1600639 | - | 771 | WP_003689746.1 | hypothetical protein | - |
| PH604_RS08345 (PH604_08320) | 1600741..1600992 | + | 252 | WP_003689748.1 | hypothetical protein | - |
| PH604_RS08350 (PH604_08325) | 1601044..1601850 | + | 807 | WP_003691772.1 | basic amino acid ABC transporter substrate-binding protein | - |
| PH604_RS08355 (PH604_08330) | 1602157..1603680 | + | 1524 | Protein_1627 | fumarate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|