MGE detailed information
MGE type: Prophage MGE length: 52307 bp
Accession: NZ_CP116239 Location: 2885650..2937956 Organism: Pseudomonas sp. TUM22785 Replicon: chromosome
Accession: NZ_CP116239 Location: 2885650..2937956 Organism: Pseudomonas sp. TUM22785 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
PI990_RS13290 (PI990_13290) | 2880919..2881182 | - | 264 | WP_271660903.1 | DUF4404 family protein | - |
PI990_RS13295 (PI990_13295) | 2881311..2882051 | - | 741 | WP_021219135.1 | hypothetical protein | - |
PI990_RS13300 (PI990_13300) | 2882128..2882538 | - | 411 | WP_271660904.1 | thioesterase family protein | - |
PI990_RS13305 (PI990_13305) | 2882647..2883348 | + | 702 | WP_031287576.1 | VacJ family lipoprotein | - |
PI990_RS13310 (PI990_13310) | 2883408..2883707 | - | 300 | WP_021219132.1 | PilZ domain-containing protein | - |
PI990_RS13315 (PI990_13315) | 2883927..2885111 | + | 1185 | WP_271660905.1 | SpoIIE family protein phosphatase | - |
PI990_RS13320 (PI990_13320) | 2885108..2885590 | + | 483 | WP_021219130.1 | STAS domain-containing protein | - |
PI990_RS13325 (PI990_13325) | 2885650..2886579 | - | 930 | WP_271660906.1 | transaldolase | - |
PI990_RS13330 (PI990_13330) | 2886880..2887158 | + | 279 | WP_271660907.1 | hypothetical protein | - |
PI990_RS13335 (PI990_13335) | 2887155..2888165 | - | 1011 | WP_271660908.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
PI990_RS13340 (PI990_13340) | 2888267..2889409 | + | 1143 | WP_271660909.1 | hypothetical protein ; Integrase | Integrase |
PI990_RS13345 (PI990_13345) | 2889406..2889684 | - | 279 | WP_213629584.1 | pyocin activator PrtN family protein | - |
PI990_RS13350 (PI990_13350) | 2889713..2889976 | - | 264 | WP_271660910.1 | hypothetical protein | - |
PI990_RS13355 (PI990_13355) | 2890207..2891613 | + | 1407 | WP_271660911.1 | hypothetical protein | - |
PI990_RS13360 (PI990_13360) | 2891689..2892390 | - | 702 | WP_271660912.1 | dual specificity protein phosphatase family protein | - |
PI990_RS13365 (PI990_13365) | 2892503..2892676 | - | 174 | WP_271660913.1 | carbon storage regulator CsrA | - |
PI990_RS13370 (PI990_13370) | 2892790..2893596 | - | 807 | WP_271660914.1 | ParB N-terminal domain-containing protein | - |
PI990_RS13380 (PI990_13380) | 2894065..2894313 | - | 249 | WP_271660915.1 | DUF1654 domain-containing protein | - |
PI990_RS13385 (PI990_13385) | 2894416..2895051 | - | 636 | WP_271660916.1 | LexA family transcriptional regulator | - |
PI990_RS13390 (PI990_13390) | 2895660..2896154 | - | 495 | WP_271660917.1 | hypothetical protein | - |
PI990_RS13395 (PI990_13395) | 2896307..2896729 | + | 423 | WP_271660918.1 | Rha family transcriptional regulator | - |
PI990_RS13400 (PI990_13400) | 2896870..2897751 | + | 882 | WP_271660919.1 | DnaT-like ssDNA-binding domain-containing protein | - |
PI990_RS13405 (PI990_13405) | 2897744..2898319 | + | 576 | WP_271660920.1 | hypothetical protein | - |
PI990_RS13410 (PI990_13410) | 2898312..2898560 | + | 249 | WP_271660921.1 | hypothetical protein | - |
PI990_RS13415 (PI990_13415) | 2898572..2899828 | + | 1257 | WP_271660922.1 | hypothetical protein ; Integrase | Integrase |
PI990_RS13420 (PI990_13420) | 2899934..2900263 | + | 330 | WP_271660923.1 | antiterminator Q family protein | - |
PI990_RS13425 (PI990_13425) | 2900481..2901710 | - | 1230 | WP_271660924.1 | hypothetical protein | - |
PI990_RS13430 (PI990_13430) | 2901894..2902337 | - | 444 | WP_271660925.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
PI990_RS13435 (PI990_13435) | 2902388..2902573 | - | 186 | WP_031286782.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
PI990_RS13440 (PI990_13440) | 2902700..2903020 | + | 321 | WP_184490333.1 | phage holin, lambda family | - |
PI990_RS13445 (PI990_13445) | 2903022..2903357 | + | 336 | WP_271660926.1 | HNH endonuclease signature motif containing protein | - |
PI990_RS13450 (PI990_13450) | 2903444..2903887 | + | 444 | WP_271660927.1 | terminase small subunit | - |
PI990_RS13455 (PI990_13455) | 2903891..2905564 | + | 1674 | WP_271660928.1 | terminase large subunit | - |
PI990_RS13460 (PI990_13460) | 2905561..2905737 | + | 177 | WP_213629624.1 | hypothetical protein | - |
PI990_RS13465 (PI990_13465) | 2905740..2907008 | + | 1269 | WP_271660929.1 | phage portal protein | - |
PI990_RS13470 (PI990_13470) | 2907005..2907955 | + | 951 | WP_271660930.1 | S49 family peptidase | - |
PI990_RS13475 (PI990_13475) | 2908018..2909328 | + | 1311 | WP_271660931.1 | phage major capsid protein | - |
PI990_RS13480 (PI990_13480) | 2909364..2909522 | + | 159 | WP_271660932.1 | hypothetical protein | - |
PI990_RS13485 (PI990_13485) | 2909522..2910073 | + | 552 | WP_271660933.1 | hypothetical protein | - |
PI990_RS13490 (PI990_13490) | 2910086..2910268 | + | 183 | WP_271660934.1 | hypothetical protein | - |
PI990_RS13495 (PI990_13495) | 2910268..2910600 | + | 333 | WP_271660935.1 | phage head closure protein | - |
PI990_RS13500 (PI990_13500) | 2910593..2911126 | + | 534 | WP_271660936.1 | HK97 gp10 family phage protein | - |
PI990_RS13505 (PI990_13505) | 2911126..2911494 | + | 369 | WP_271660937.1 | DUF3168 domain-containing protein | - |
PI990_RS13510 (PI990_13510) | 2911519..2912013 | + | 495 | WP_236207842.1 | phage tail tube protein | - |
PI990_RS13515 (PI990_13515) | 2912017..2912373 | + | 357 | Protein_2672 | phage tail assembly chaperone family protein, TAC | - |
PI990_RS13520 (PI990_13520) | 2912397..2912654 | + | 258 | WP_271660938.1 | hypothetical protein | - |
PI990_RS13525 (PI990_13525) | 2912677..2915160 | + | 2484 | WP_271660939.1 | phage tail length tape measure family protein | - |
PI990_RS13530 (PI990_13530) | 2915160..2915501 | + | 342 | WP_271660940.1 | phage tail protein | - |
PI990_RS13535 (PI990_13535) | 2915510..2916784 | + | 1275 | WP_271660941.1 | hypothetical protein | - |
PI990_RS13540 (PI990_13540) | 2916787..2917611 | + | 825 | WP_271660942.1 | phage minor tail protein L | - |
PI990_RS13545 (PI990_13545) | 2917614..2918396 | + | 783 | WP_271660943.1 | C40 family peptidase | - |
PI990_RS13550 (PI990_13550) | 2918393..2918974 | + | 582 | WP_271660944.1 | tail assembly protein | - |
PI990_RS13555 (PI990_13555) | 2919116..2921722 | + | 2607 | WP_271660945.1 | AAA family ATPase | - |
PI990_RS13560 (PI990_13560) | 2921788..2925141 | + | 3354 | WP_271660946.1 | phage tail protein | - |
PI990_RS13565 (PI990_13565) | 2925145..2925432 | + | 288 | WP_271660947.1 | hypothetical protein | - |
PI990_RS13570 (PI990_13570) | 2925433..2926101 | + | 669 | WP_271660948.1 | hypothetical protein | - |
PI990_RS13575 (PI990_13575) | 2926440..2926961 | - | 522 | WP_236232560.1 | RES domain-containing protein | - |
PI990_RS13580 (PI990_13580) | 2926958..2927449 | - | 492 | WP_271660949.1 | DUF2384 domain-containing protein | - |
PI990_RS13585 (PI990_13585) | 2927538..2928449 | - | 912 | WP_271660950.1 | Bro-N domain-containing protein | - |
PI990_RS13590 (PI990_13590) | 2928858..2929550 | + | 693 | WP_271660951.1 | ImmA/IrrE family metallo-endopeptidase | - |
PI990_RS13595 (PI990_13595) | 2929609..2930169 | + | 561 | WP_271660952.1 | glycoside hydrolase family 19 protein | - |
PI990_RS13600 (PI990_13600) | 2930166..2930711 | + | 546 | WP_271660953.1 | lysis system i-spanin subunit Rz | - |
PI990_RS13605 (PI990_13605) | 2930695..2931171 | - | 477 | WP_271660954.1 | hypothetical protein | - |
PI990_RS13610 (PI990_13610) | 2931484..2931843 | + | 360 | WP_271660955.1 | DNA binding protein | - |
PI990_RS13615 (PI990_13615) | 2931879..2932169 | + | 291 | WP_271660956.1 | barstar family protein | - |
PI990_RS13620 (PI990_13620) | 2932971..2933855 | + | 885 | WP_271660957.1 | hypothetical protein | - |
PI990_RS13625 (PI990_13625) | 2934053..2934907 | + | 855 | WP_271660958.1 | hypothetical protein | - |
PI990_RS13630 (PI990_13630) | 2935042..2935635 | - | 594 | WP_271660959.1 | hypothetical protein | - |
PI990_RS13635 (PI990_13635) | 2935685..2936080 | - | 396 | WP_271660960.1 | hypothetical protein | - |
PI990_RS13640 (PI990_13640) | 2936251..2936688 | + | 438 | WP_271660961.1 | S24 family peptidase | - |
PI990_RS13645 (PI990_13645) | 2936685..2937956 | + | 1272 | WP_271660962.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
PI990_RS13650 (PI990_13650) | 2938067..2939251 | - | 1185 | WP_271660963.1 | HNH endonuclease signature motif containing protein | - |
PI990_RS13655 (PI990_13655) | 2939362..2940015 | - | 654 | WP_271660964.1 | hypothetical protein | - |
PI990_RS13660 (PI990_13660) | 2940504..2940632 | + | 129 | WP_271660965.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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