MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36682 bp
Accession: NZ_CP116178 Location: 1..36682 Organism: Escherichia coli strain DETEC-E601 Replicon: plasmid pDETEC62
Accession: NZ_CP116178 Location: 1..36682 Organism: Escherichia coli strain DETEC-E601 Replicon: plasmid pDETEC62
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC02_RS24340 (PIC02_24335) | 294..869 | + | 576 | WP_032180616.1 | hypothetical protein | - |
| PIC02_RS24345 (PIC02_24340) | 874..3027 | + | 2154 | WP_072671512.1 | type IA DNA topoisomerase | - |
| PIC02_RS24350 (PIC02_24345) | 3024..3230 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| PIC02_RS24355 (PIC02_24350) | 3246..3707 | + | 462 | WP_072671513.1 | H-NS family nucleoid-associated regulatory protein | - |
| PIC02_RS24360 (PIC02_24355) | 3758..4021 | + | 264 | WP_000072657.1 | hypothetical protein | - |
| PIC02_RS24365 (PIC02_24360) | 4197..5522 | - | 1326 | WP_000201789.1 | hypothetical protein | - |
| PIC02_RS24370 (PIC02_24365) | 5573..6364 | - | 792 | WP_000501395.1 | hypothetical protein | - |
| PIC02_RS24375 (PIC02_24370) | 6534..6770 | - | 237 | WP_000887751.1 | hypothetical protein | - |
| PIC02_RS24380 | 7092..7187 | + | 96 | WP_000609149.1 | DinQ-like type I toxin DqlB | - |
| PIC02_RS24385 (PIC02_24375) | 7254..7433 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| PIC02_RS24390 (PIC02_24380) | 7549..8193 | - | 645 | WP_000203200.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PIC02_RS24395 (PIC02_24385) | 8574..9236 | + | 663 | WP_000516403.1 | division plane positioning ATPase MipZ | - |
| PIC02_RS24400 (PIC02_24390) | 9334..9615 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| PIC02_RS24405 (PIC02_24395) | 9640..10617 | + | 978 | WP_072671515.1 | hypothetical protein | - |
| PIC02_RS24410 (PIC02_24400) | 10614..10970 | - | 357 | WP_001426297.1 | DNA distortion polypeptide 3 | - |
| PIC02_RS24415 (PIC02_24405) | 11158..11601 | - | 444 | WP_072671517.1 | hypothetical protein | - |
| PIC02_RS24420 (PIC02_24410) | 11605..12447 | - | 843 | WP_072671519.1 | replication initiation protein | - |
| PIC02_RS24425 (PIC02_24415) | 12468..13307 | - | 840 | WP_001352874.1 | replication initiation protein | - |
| PIC02_RS24430 (PIC02_24420) | 14542..14793 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| PIC02_RS24435 (PIC02_24425) | 14783..15064 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PIC02_RS24440 (PIC02_24430) | 15210..15533 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| PIC02_RS24445 (PIC02_24435) | 15578..15823 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| PIC02_RS24450 (PIC02_24440) | 15813..16028 | + | 216 | WP_001180117.1 | hypothetical protein | - |
| PIC02_RS24455 (PIC02_24445) | 16121..16450 | + | 330 | WP_000866654.1 | hypothetical protein | - |
| PIC02_RS24460 (PIC02_24450) | 16493..16672 | + | 180 | WP_000439079.1 | hypothetical protein | - |
| PIC02_RS24465 (PIC02_24455) | 16742..16891 | + | 150 | WP_167777664.1 | hypothetical protein | - |
| PIC02_RS24470 (PIC02_24460) | 16904..17176 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| PIC02_RS24475 (PIC02_24465) | 17510..18055 | + | 546 | WP_001426313.1 | DNA distortion polypeptide 1 | - |
| PIC02_RS24480 (PIC02_24470) | 18058..19224 | + | 1167 | WP_072671520.1 | hypothetical protein | Relaxase |
| PIC02_RS24485 (PIC02_24475) | 19577..20095 | + | 519 | WP_001675951.1 | transcription termination/antitermination NusG family protein | - |
| PIC02_RS24490 (PIC02_24480) | 20025..20237 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| PIC02_RS24495 (PIC02_24485) | 20270..20917 | + | 648 | WP_072671522.1 | hypothetical protein | VF |
| PIC02_RS24500 (PIC02_24490) | 20895..21191 | + | 297 | WP_032180636.1 | TrbC/VirB2 family protein | - |
| PIC02_RS24505 (PIC02_24495) | 21210..23963 | + | 2754 | WP_001328100.1 | Type IV secretion system protein virB4 | VF |
| PIC02_RS24510 (PIC02_24500) | 23974..24732 | + | 759 | WP_000744200.1 | type IV secretion system protein | - |
| PIC02_RS24515 (PIC02_24505) | 24733..25020 | + | 288 | WP_000835347.1 | EexN family lipoprotein | - |
| PIC02_RS24520 (PIC02_24510) | 25029..26159 | + | 1131 | WP_015058232.1 | type IV secretion system protein | - |
| PIC02_RS24525 (PIC02_24515) | 26287..26415 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| PIC02_RS24530 (PIC02_24520) | 26405..27118 | + | 714 | WP_000394612.1 | type IV secretion system protein | - |
| PIC02_RS24535 (PIC02_24525) | 27123..28052 | + | 930 | WP_072671504.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| PIC02_RS24540 (PIC02_24530) | 28049..29254 | + | 1206 | WP_016247736.1 | hypothetical protein | VF |
| PIC02_RS24545 (PIC02_24535) | 29256..30287 | + | 1032 | WP_072671506.1 | Type IV secretion system protein VirB11 | VF |
| PIC02_RS24550 (PIC02_24540) | 30290..32125 | + | 1836 | WP_072671507.1 | type IV secretory system conjugative DNA transfer family protein | - |
| PIC02_RS24555 (PIC02_24545) | 32122..32535 | + | 414 | WP_000722607.1 | cag pathogenicity island Cag12 family protein | - |
| PIC02_RS24560 (PIC02_24550) | 32532..32834 | + | 303 | WP_033552214.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PIC02_RS24565 (PIC02_24555) | 32935..34059 | + | 1125 | WP_072671508.1 | YadA-like family protein | - |
| PIC02_RS24570 (PIC02_24560) | 34092..34319 | + | 228 | WP_021523570.1 | hypothetical protein | - |
| PIC02_RS24575 (PIC02_24565) | 34450..34707 | + | 258 | WP_000726017.1 | hypothetical protein | - |
| PIC02_RS24580 (PIC02_24570) | 34823..35140 | + | 318 | WP_033559037.1 | hypothetical protein | - |
| PIC02_RS24585 (PIC02_24575) | 35137..35628 | + | 492 | WP_016247731.1 | thermonuclease family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|