MGE detailed information
MGE type: Genomic_island MGE length: 19087 bp
Accession: NZ_CP116176 Location: 4056125..4075211 Organism: Escherichia coli strain DETEC-E601 Replicon: chromosome
Accession: NZ_CP116176 Location: 4056125..4075211 Organism: Escherichia coli strain DETEC-E601 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC02_RS19600 (4052450) | 4052450..4053658 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| PIC02_RS19605 (4053684) | 4053684..4055015 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| PIC02_RS19610 (4055037) | 4055037..4056026 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| PIC02_RS19615 (4056125) | 4056125..4057063 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| PIC02_RS19620 (4057378) | 4057378..4057596 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| PIC02_RS19625 (4057852) | 4057852..4058391 | + | 540 | WP_000675746.1 | protein YhaB | - |
| PIC02_RS19630 (4058413) | 4058413..4059600 | + | 1188 | WP_000484573.1 | YhaC family protein | - |
| PIC02_RS19635 (4060219) | 4060219..4060428 | - | 210 | WP_016151030.1 | hypothetical protein | - |
| PIC02_RS19640 (4060618) | 4060618..4060863 | + | 246 | WP_000717902.1 | hypothetical protein | - |
| PIC02_RS19645 (4060875) | 4060875..4061510 | + | 636 | WP_205883926.1 | hypothetical protein | - |
| PIC02_RS19650 (4061677) | 4061677..4062201 | - | 525 | WP_001447310.1 | phase 1 flagellin transcriptional repressor | - |
| PIC02_RS19655 (4062271) | 4062271..4063542 | - | 1272 | WP_000079831.1 | Flagellin | VF |
| PIC02_RS19660 (4063983) | 4063983..4064561 | + | 579 | WP_000091685.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| PIC02_RS19665 (4064845) | 4064845..4065567 | - | 723 | WP_000957439.1 | inovirus-type Gp2 protein | - |
| PIC02_RS19670 (4065942) | 4065942..4067336 | - | 1395 | WP_226234417.1 | IS91 family transposase ISMno24 | Transposase |
| PIC02_RS19680 (4068035) | 4068035..4069180 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| PIC02_RS19685 (4069277) | 4069277..4070167 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| PIC02_RS19690 (4070197) | 4070197..4070967 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| PIC02_RS19695 (4070983) | 4070983..4072317 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| PIC02_RS19700 (4072692) | 4072692..4074263 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| PIC02_RS19705 (4074412) | 4074412..4074747 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| PIC02_RS19710 (4074747) | 4074747..4075211 | + | 465 | WP_000347267.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| PIC02_RS19715 (4075266) | 4075266..4076075 | - | 810 | WP_000072193.1 | aga operon transcriptional regulator AgaR | - |
| PIC02_RS19720 (4076324) | 4076324..4077604 | + | 1281 | WP_236929999.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| PIC02_RS19725 (4077627) | 4077627..4078100 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| PIC02_RS19730 (4078111) | 4078111..4078890 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| PIC02_RS19735 (4078880) | 4078880..4079758 | + | 879 | WP_001298758.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| PIC02_RS19740 (4079776) | 4079776..4080210 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|