MGE detailed information
MGE type: IScluster/Tn MGE length: 24682 bp
Accession: NZ_CP116161 Location: 51532..76213 Organism: Escherichia coli strain DETEC-P351 Replicon: plasmid pDETEC6
Accession: NZ_CP116161 Location: 51532..76213 Organism: Escherichia coli strain DETEC-P351 Replicon: plasmid pDETEC6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC26_RS24145 (47009) | 47009..48079 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| PIC26_RS24150 (48098) | 48098..49306 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (49486) | 49486..49543 | - | 58 | NuclAT_1 | - | - |
| - (49486) | 49486..49543 | - | 58 | NuclAT_1 | - | - |
| - (49486) | 49486..49543 | - | 58 | NuclAT_1 | - | - |
| - (49486) | 49486..49543 | - | 58 | NuclAT_1 | - | - |
| PIC26_RS24155 (49613) | 49613..50395 | - | 783 | WP_023063753.1 | protein FinQ | - |
| PIC26_RS24160 (50591) | 50591..50908 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24165 (50905) | 50905..51438 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24170 (51532) | 51532..52677 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24180 (54089) | 54089..54406 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24185 (54403) | 54403..54936 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24190 (55030) | 55030..56175 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24200 (57587) | 57587..57904 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24205 (57901) | 57901..58434 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24210 (58528) | 58528..59673 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24220 (61085) | 61085..61402 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24225 (61399) | 61399..61932 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24230 (62026) | 62026..63171 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24240 (64583) | 64583..64900 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24245 (64897) | 64897..65430 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24250 (65524) | 65524..66669 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24260 (68081) | 68081..68398 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24265 (68395) | 68395..68928 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24270 (69022) | 69022..70167 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24280 (71372) | 71372..71470 | + | 99 | Protein_84 | ethanolamine utilization protein EutE | - |
| PIC26_RS24285 (71542) | 71542..71751 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| PIC26_RS24290 (72143) | 72143..72319 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| PIC26_RS24295 (72384) | 72384..72479 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| PIC26_RS24300 (72980) | 72980..73231 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| PIC26_RS24305 (73303) | 73303..73455 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (73507) | 73507..73567 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (73507) | 73507..73567 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (73507) | 73507..73567 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (73507) | 73507..73567 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| PIC26_RS24310 (73776) | 73776..74150 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| PIC26_RS24315 (74303) | 74303..75460 | + | 1158 | Protein_91 | IS1380 family transposase ISEcp1 | Transposase |
| PIC26_RS24320 (75516) | 75516..76213 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| PIC26_RS24325 (76224) | 76224..76532 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| PIC26_RS24330 (76974) | 76974..77261 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| PIC26_RS24335 (77299) | 77299..77457 | - | 159 | Protein_95 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|