MGE detailed information
MGE type: Mobilizable plasmid MGE length: 77960 bp
Accession: NZ_CP116161 Location: 1..77960 Organism: Escherichia coli strain DETEC-P351 Replicon: plasmid pDETEC6
Accession: NZ_CP116161 Location: 1..77960 Organism: Escherichia coli strain DETEC-P351 Replicon: plasmid pDETEC6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC26_RS23860 (455) | 455..1486 | + | 1032 | WP_000907866.1 | plasmid replication initiator RepA | - |
| PIC26_RS23865 (2184) | 2184..2399 | + | 216 | WP_000841013.1 | hypothetical protein | - |
| PIC26_RS23870 (2396) | 2396..3388 | + | 993 | WP_001579760.1 | hypothetical protein | - |
| PIC26_RS23875 (3447) | 3447..3656 | - | 210 | Protein_3 | ProQ/FINO family protein | - |
| PIC26_RS23880 (3722) | 3722..4426 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PIC26_RS23885 (4647) | 4647..4997 | - | 351 | WP_000493380.1 | hypothetical protein | - |
| PIC26_RS23890 (5567) | 5567..6148 | + | 582 | WP_000139427.1 | hypothetical protein | - |
| PIC26_RS23895 (6328) | 6328..6663 | + | 336 | WP_000628093.1 | hypothetical protein | - |
| PIC26_RS23900 (6651) | 6651..7298 | + | 648 | WP_000074712.1 | hypothetical protein | - |
| PIC26_RS23905 (7469) | 7469..7753 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| PIC26_RS23910 (7773) | 7773..8906 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| PIC26_RS23915 (9425) | 9425..9715 | - | 291 | WP_001229373.1 | hypothetical protein | - |
| PIC26_RS23920 (9715) | 9715..10845 | - | 1131 | WP_000542417.1 | DUF4238 domain-containing protein | - |
| PIC26_RS23925 (10875) | 10875..11978 | - | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| PIC26_RS23930 (12307) | 12307..12564 | + | 258 | WP_000371888.1 | hypothetical protein | - |
| PIC26_RS23935 (12564) | 12564..13154 | + | 591 | WP_000194568.1 | hypothetical protein | - |
| PIC26_RS23940 (13419) | 13419..14975 | + | 1557 | WP_001579759.1 | AAA family ATPase | - |
| PIC26_RS23945 (15170) | 15170..15583 | + | 414 | Protein_17 | proQ/FINO family protein | - |
| PIC26_RS23950 (15636) | 15636..16340 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PIC26_RS23955 (16317) | 16317..16691 | + | 375 | WP_050559527.1 | hypothetical protein | - |
| PIC26_RS23960 (16759) | 16759..17541 | + | 783 | WP_001372173.1 | site-specific integrase | - |
| PIC26_RS23965 (17679) | 17679..17954 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| PIC26_RS23970 (17948) | 17948..18592 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| PIC26_RS23975 (18821) | 18821..19792 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| PIC26_RS23980 (19797) | 19797..20189 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| PIC26_RS23985 (20194) | 20194..21465 | - | 1272 | WP_000457523.1 | Y-family DNA polymerase | - |
| PIC26_RS23990 (21465) | 21465..21902 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PIC26_RS23995 (21899) | 21899..22147 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| PIC26_RS24000 (22565) | 22565..23467 | + | 903 | WP_072748701.1 | DUF1281 domain-containing protein | - |
| PIC26_RS24005 (23464) | 23464..23775 | + | 312 | WP_032072582.1 | hypothetical protein | - |
| PIC26_RS24010 (23852) | 23852..24535 | + | 684 | WP_000086147.1 | DNA methylase | - |
| PIC26_RS24015 (24536) | 24536..24757 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| PIC26_RS24020 (24771) | 24771..25205 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| PIC26_RS24025 (25251) | 25251..26027 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| PIC26_RS24030 (26439) | 26439..26864 | + | 426 | WP_001579750.1 | antirestriction protein | - |
| PIC26_RS24035 (26911) | 26911..27333 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| PIC26_RS24040 (27330) | 27330..27521 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PIC26_RS24045 (27592) | 27592..27906 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| PIC26_RS24050 (28942) | 28942..30843 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| PIC26_RS24055 (30993) | 30993..31478 | + | 486 | WP_032210122.1 | single-stranded DNA-binding protein | - |
| PIC26_RS24060 (31536) | 31536..31769 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| PIC26_RS24065 (31828) | 31828..33786 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| PIC26_RS24070 (33841) | 33841..34275 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| PIC26_RS24075 (34272) | 34272..34991 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| PIC26_RS24080 (34988) | 34988..35584 | + | 597 | Protein_44 | hypothetical protein | - |
| PIC26_RS24085 (36046) | 36046..36546 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| PIC26_RS24090 (37275) | 37275..37709 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| PIC26_RS24095 (37803) | 37803..38069 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| PIC26_RS24100 (38134) | 38134..39060 | + | 927 | WP_000038402.1 | ISNCY family transposase ISRor2 | VF |
| PIC26_RS24105 (39083) | 39083..39280 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| PIC26_RS24110 (39311) | 39311..39562 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| PIC26_RS24115 (39596) | 39596..39793 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| PIC26_RS24120 (40142) | 40142..40990 | + | 849 | WP_001599394.1 | DUF4942 domain-containing protein | - |
| PIC26_RS24125 (41077) | 41077..41412 | - | 336 | WP_021529212.1 | hypothetical protein | - |
| PIC26_RS24130 (41646) | 41646..41978 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| PIC26_RS24135 (41989) | 41989..44688 | + | 2700 | WP_011264053.1 | hypothetical protein | Relaxase |
| PIC26_RS24140 (44725) | 44725..47016 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| PIC26_RS24145 (47009) | 47009..48079 | - | 1071 | WP_011264050.1 | IncI1-type conjugal transfer protein TrbB | - |
| PIC26_RS24150 (48098) | 48098..49306 | - | 1209 | WP_011264049.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (49486) | 49486..49543 | - | 58 | NuclAT_1 | - | - |
| - (49486) | 49486..49543 | - | 58 | NuclAT_1 | - | - |
| - (49486) | 49486..49543 | - | 58 | NuclAT_1 | - | - |
| - (49486) | 49486..49543 | - | 58 | NuclAT_1 | - | - |
| PIC26_RS24155 (49613) | 49613..50395 | - | 783 | WP_023063753.1 | protein FinQ | - |
| PIC26_RS24160 (50591) | 50591..50908 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24165 (50905) | 50905..51438 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24170 (51532) | 51532..52677 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24180 (54089) | 54089..54406 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24185 (54403) | 54403..54936 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24190 (55030) | 55030..56175 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24200 (57587) | 57587..57904 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24205 (57901) | 57901..58434 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24210 (58528) | 58528..59673 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24220 (61085) | 61085..61402 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24225 (61399) | 61399..61932 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24230 (62026) | 62026..63171 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24240 (64583) | 64583..64900 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24245 (64897) | 64897..65430 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24250 (65524) | 65524..66669 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24260 (68081) | 68081..68398 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| PIC26_RS24265 (68395) | 68395..68928 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| PIC26_RS24270 (69022) | 69022..70167 | - | 1146 | WP_075985683.1 | Beta-lactamase | ARG |
| PIC26_RS24280 (71372) | 71372..71470 | + | 99 | Protein_84 | ethanolamine utilization protein EutE | - |
| PIC26_RS24285 (71542) | 71542..71751 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| PIC26_RS24290 (72143) | 72143..72319 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| PIC26_RS24295 (72384) | 72384..72479 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| PIC26_RS24300 (72980) | 72980..73231 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| PIC26_RS24305 (73303) | 73303..73455 | - | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| - (73507) | 73507..73567 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (73507) | 73507..73567 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (73507) | 73507..73567 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (73507) | 73507..73567 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| PIC26_RS24310 (73776) | 73776..74150 | + | 375 | WP_223349261.1 | hypothetical protein | - |
| PIC26_RS24315 (74303) | 74303..75460 | + | 1158 | Protein_91 | IS1380 family transposase ISEcp1 | Transposase |
| PIC26_RS24320 (75516) | 75516..76213 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| PIC26_RS24325 (76224) | 76224..76532 | - | 309 | WP_039023235.1 | transcription termination/antitermination NusG family protein | - |
| PIC26_RS24330 (76974) | 76974..77261 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| PIC26_RS24335 (77299) | 77299..77457 | - | 159 | Protein_95 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|