MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP116136 Location: 3883553..3894311 Organism: Escherichia coli strain DETEC-P649 Replicon: chromosome
Accession: NZ_CP116136 Location: 3883553..3894311 Organism: Escherichia coli strain DETEC-P649 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB66_RS18460 (3878899) | 3878899..3879681 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| PIB66_RS18465 (3879997) | 3879997..3883206 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| PIB66_RS18470 (3883553) | 3883553..3884023 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| PIB66_RS18475 (3884020) | 3884020..3884122 | + | 103 | Protein_3617 | helix-turn-helix domain-containing protein | - |
| PIB66_RS18480 (3884214) | 3884214..3884372 | + | 159 | Protein_3618 | integrase | - |
| PIB66_RS18490 (3884577) | 3884577..3885830 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| PIB66_RS18495 (3885842) | 3885842..3886945 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| PIB66_RS18500 (3887233) | 3887233..3888288 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| PIB66_RS18505 (3888327) | 3888327..3888728 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (3889446) | 3889446..3889526 | - | 81 | NuclAT_10 | - | - |
| - (3889446) | 3889446..3889526 | - | 81 | NuclAT_10 | - | - |
| - (3889446) | 3889446..3889526 | - | 81 | NuclAT_10 | - | - |
| - (3889446) | 3889446..3889526 | - | 81 | NuclAT_10 | - | - |
| PIB66_RS18510 (3888786) | 3888786..3890030 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| PIB66_RS18515 (3890122) | 3890122..3890580 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| PIB66_RS18520 (3890841) | 3890841..3892298 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| PIB66_RS18525 (3892355) | 3892355..3892707 | - | 353 | Protein_3626 | peptide chain release factor H | - |
| PIB66_RS18530 (3892703) | 3892703..3892909 | - | 207 | Protein_3627 | RtcB family protein | - |
| PIB66_RS18535 (3893155) | 3893155..3893607 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| PIB66_RS18540 (3893617) | 3893617..3894015 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| PIB66_RS18545 (3894018) | 3894018..3894311 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| PIB66_RS18550 (3894363) | 3894363..3895418 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| PIB66_RS18555 (3895489) | 3895489..3896274 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| PIB66_RS18560 (3896246) | 3896246..3897958 | + | 1713 | Protein_3633 | flagellar biosynthesis protein FlhA | - |
| PIB66_RS18565 (3898063) | 3898063..3898341 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| PIB66_RS18570 (3898334) | 3898334..3898690 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|