MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30896 bp
Accession: NZ_CP116128 Location: 1..30896 Organism: Escherichia coli strain DETEC-P666 Replicon: plasmid pDETEC36
Accession: NZ_CP116128 Location: 1..30896 Organism: Escherichia coli strain DETEC-P666 Replicon: plasmid pDETEC36
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB57_RS25455 (PIB57_25460) | 455..1684 | + | 1230 | WP_001694183.1 | hypothetical protein | Relaxase |
| PIB57_RS25460 (PIB57_25465) | 1761..2054 | + | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| PIB57_RS25465 (PIB57_25470) | 2051..2266 | + | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| PIB57_RS25470 (PIB57_25475) | 2622..3242 | + | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| PIB57_RS25475 (PIB57_25480) | 3256..3582 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| PIB57_RS25480 (PIB57_25485) | 3601..6348 | + | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| PIB57_RS25485 (PIB57_25490) | 6360..7076 | + | 717 | WP_000832283.1 | type IV secretion system protein | - |
| PIB57_RS25490 (PIB57_25495) | 7088..8182 | + | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| PIB57_RS25495 (PIB57_25500) | 8679..9365 | + | 687 | WP_021548634.1 | Type IV secretion system protein virB8 | VF |
| PIB57_RS25500 (PIB57_25505) | 9362..10270 | + | 909 | WP_271291425.1 | Type IV secretion system protein virB9 | VF |
| PIB57_RS25505 (PIB57_25510) | 10263..11381 | + | 1119 | WP_000131269.1 | Type IV secretion system protein virB10 | VF |
| PIB57_RS25510 (PIB57_25515) | 11383..12411 | + | 1029 | WP_001014667.1 | Type IV secretion system protein VirB11 | VF |
| PIB57_RS25515 (PIB57_25520) | 12398..14260 | + | 1863 | WP_000847107.1 | relaxosome-coupling protein TaxB | - |
| PIB57_RS25520 (PIB57_25525) | 14269..14691 | + | 423 | WP_001353737.1 | cag pathogenicity island Cag12 family protein | - |
| PIB57_RS25525 (PIB57_25530) | 14675..14980 | + | 306 | WP_000147047.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PIB57_RS25530 (PIB57_25535) | 15035..15283 | + | 249 | WP_159120708.1 | hypothetical protein | - |
| PIB57_RS25535 (PIB57_25540) | 15355..15789 | + | 435 | WP_201286317.1 | hypothetical protein | - |
| PIB57_RS25540 (PIB57_25545) | 15786..16304 | + | 519 | WP_094326099.1 | thermonuclease family protein | - |
| PIB57_RS25545 (PIB57_25550) | 16386..17648 | + | 1263 | WP_001503550.1 | AAA family ATPase | - |
| PIB57_RS25550 (PIB57_25555) | 17652..18227 | + | 576 | WP_001199074.1 | hypothetical protein | - |
| PIB57_RS25555 (PIB57_25560) | 18232..20385 | + | 2154 | WP_053911937.1 | type IA DNA topoisomerase | - |
| PIB57_RS25560 (PIB57_25565) | 20382..20588 | + | 207 | WP_000850857.1 | hemolysin expression modulator Hha | - |
| PIB57_RS25565 (PIB57_25570) | 20604..21068 | + | 465 | WP_001293143.1 | H-NS family nucleoid-associated regulatory protein | - |
| PIB57_RS25570 (PIB57_25575) | 21689..22336 | + | 648 | WP_000587671.1 | division plane positioning ATPase MipZ | - |
| PIB57_RS25575 (PIB57_25580) | 22411..22680 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| PIB57_RS25580 (PIB57_25585) | 22705..22920 | + | 216 | WP_000806548.1 | hypothetical protein | - |
| PIB57_RS25585 (PIB57_25590) | 23215..23742 | - | 528 | WP_000577044.1 | DUF2726 domain-containing protein | - |
| PIB57_RS25590 (PIB57_25595) | 23878..24282 | - | 405 | WP_063270189.1 | hypothetical protein | - |
| PIB57_RS25595 (PIB57_25600) | 24295..25164 | - | 870 | WP_271291424.1 | replication initiation protein | - |
| PIB57_RS25600 (PIB57_25605) | 26862..27377 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| PIB57_RS25605 (PIB57_25610) | 27482..28024 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| PIB57_RS25610 (PIB57_25615) | 28021..28272 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| PIB57_RS25615 (PIB57_25620) | 28259..28486 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| PIB57_RS25620 (PIB57_25625) | 28488..28808 | + | 321 | WP_224693477.1 | molecular chaperone DnaJ | - |
| PIB57_RS25625 (PIB57_25630) | 28935..29207 | + | 273 | WP_001272373.1 | hypothetical protein | - |
| PIB57_RS25630 (PIB57_25635) | 29275..29580 | + | 306 | WP_072182957.1 | hypothetical protein | - |
| PIB57_RS25635 (PIB57_25640) | 29886..30134 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | - |
| PIB57_RS25640 (PIB57_25645) | 30131..30478 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|