MGE detailed information
MGE type: Genomic_island MGE length: 24410 bp
Accession: NZ_CP116123 Location: 4494588..4518997 Organism: Escherichia coli strain DETEC-P666 Replicon: chromosome
Accession: NZ_CP116123 Location: 4494588..4518997 Organism: Escherichia coli strain DETEC-P666 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIB57_RS21390 (4491213) | 4491213..4492307 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| PIB57_RS21395 (4492326) | 4492326..4493576 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| PIB57_RS21400 (4493660) | 4493660..4494595 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| PIB57_RS21405 (4494588) | 4494588..4495523 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| PIB57_RS21410 (4496059) | 4496059..4496511 | - | 453 | WP_000558152.1 | acyltransferase | - |
| PIB57_RS21415 (4497032) | 4497032..4497763 | - | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| PIB57_RS21420 (4498433) | 4498433..4498963 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| PIB57_RS21425 (4500126) | 4500126..4501349 | - | 1224 | WP_001107215.1 | hypothetical protein | - |
| PIB57_RS21430 (4501450) | 4501450..4502334 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| PIB57_RS21435 (4502537) | 4502537..4503217 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| PIB57_RS21440 (4503365) | 4503365..4504042 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| PIB57_RS21445 (4504048) | 4504048..4504281 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| PIB57_RS21450 (4504371) | 4504371..4505189 | + | 819 | WP_023909075.1 | DUF932 domain-containing protein | - |
| PIB57_RS21455 (4505281) | 4505281..4505766 | + | 486 | WP_001586019.1 | antirestriction protein | - |
| PIB57_RS21460 (4505782) | 4505782..4506258 | + | 477 | WP_001186773.1 | RadC family protein | - |
| PIB57_RS21465 (4506321) | 4506321..4506542 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| PIB57_RS21470 (4506705) | 4506705..4507073 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PIB57_RS21475 (4507163) | 4507163..4507537 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIB57_RS21480 (4507534) | 4507534..4508022 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| PIB57_RS21485 (4508034) | 4508034..4508231 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| PIB57_RS21490 (4508328) | 4508328..4508897 | + | 570 | WP_001290252.1 | DUF4942 domain-containing protein | - |
| PIB57_RS21495 (4509646) | 4509646..4511184 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PIB57_RS21500 (4511550) | 4511550..4512884 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PIB57_RS21505 (4512964) | 4512964..4515111 | + | 2148 | WP_089423814.1 | lysine decarboxylase CadA | - |
| PIB57_RS21510 (4515170) | 4515170..4516627 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| PIB57_RS21515 (4516864) | 4516864..4518381 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| PIB57_RS21520 (4518500) | 4518500..4518673 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PIB57_RS21525 (4518701) | 4518701..4518997 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PIB57_RS21530 (4519226) | 4519226..4519498 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PIB57_RS21535 (4519510) | 4519510..4519740 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PIB57_RS21540 (4519920) | 4519920..4521551 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| PIB57_RS21545 (4521548) | 4521548..4522267 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|