MGE detailed information
MGE type: Conjugative plasmid MGE length: 87921 bp
Accession: NZ_CP116117 Location: 1..87921 Organism: Escherichia coli strain DETEC-P793 Replicon: plasmid pDETEC14
Accession: NZ_CP116117 Location: 1..87921 Organism: Escherichia coli strain DETEC-P793 Replicon: plasmid pDETEC14
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC92_RS25615 (455) | 455..1486 | + | 1032 | WP_255081893.1 | plasmid replication initiator RepA | - |
| PIC92_RS25620 (2557) | 2557..3066 | - | 510 | WP_053291131.1 | hypothetical protein | - |
| PIC92_RS25625 (3122) | 3122..3724 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| PIC92_RS25630 (4078) | 4078..5424 | + | 1347 | WP_255081894.1 | protein YagA | - |
| PIC92_RS25635 (5703) | 5703..7583 | + | 1881 | WP_001474701.1 | colicin Ia central receptor-binding domain-containing protein | - |
| PIC92_RS25640 (7605) | 7605..7940 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| PIC92_RS25645 (8069) | 8069..8416 | + | 348 | WP_000142441.1 | DUF6404 family protein | - |
| PIC92_RS25650 (8434) | 8434..9024 | - | 591 | WP_032280054.1 | hypothetical protein | - |
| PIC92_RS25655 (9024) | 9024..9278 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| PIC92_RS25660 (9846) | 9846..10259 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| PIC92_RS25665 (10261) | 10261..11040 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| PIC92_RS25670 (11220) | 11220..11864 | + | 645 | WP_001144036.1 | ParA family protein | - |
| PIC92_RS25675 (11951) | 11951..12259 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| PIC92_RS25680 (12673) | 12673..13653 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| PIC92_RS25685 (13646) | 13646..14062 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| PIC92_RS25690 (14064) | 14064..15338 | - | 1275 | WP_063077240.1 | Y-family DNA polymerase | - |
| PIC92_RS25695 (15338) | 15338..15775 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PIC92_RS25700 (15772) | 15772..16020 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| PIC92_RS25705 (16438) | 16438..17340 | + | 903 | WP_271293070.1 | DUF1281 domain-containing protein | - |
| PIC92_RS25710 (17337) | 17337..17647 | + | 311 | Protein_19 | hypothetical protein | - |
| PIC92_RS25715 (17724) | 17724..18407 | + | 684 | WP_000086174.1 | DNA methylase | - |
| PIC92_RS25720 (18408) | 18408..18629 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| PIC92_RS25725 (18610) | 18610..19077 | + | 468 | WP_223230041.1 | DUF1380 family protein | - |
| PIC92_RS25730 (19122) | 19122..19892 | + | 771 | WP_001006206.1 | hypothetical protein | - |
| PIC92_RS25735 (20310) | 20310..20735 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| PIC92_RS25740 (20782) | 20782..21204 | + | 423 | WP_032167172.1 | DUF1380 family protein | - |
| PIC92_RS25745 (21201) | 21201..21392 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| PIC92_RS25750 (21726) | 21726..21794 | - | 69 | Protein_27 | pilus protein | - |
| PIC92_RS25755 (22163) | 22163..22690 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| PIC92_RS25760 (22748) | 22748..22981 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| PIC92_RS25765 (23040) | 23040..24998 | + | 1959 | WP_271293069.1 | ParB/RepB/Spo0J family partition protein | - |
| PIC92_RS25770 (25053) | 25053..25487 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| PIC92_RS25775 (25484) | 25484..26203 | + | 720 | WP_001276262.1 | plasmid SOS inhibition protein A | - |
| PIC92_RS25780 (26200) | 26200..26796 | + | 597 | WP_053291135.1 | hypothetical protein | - |
| PIC92_RS25785 (27259) | 27259..27759 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| PIC92_RS25790 (28488) | 28488..28922 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| PIC92_RS25795 (29016) | 29016..29282 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| PIC92_RS25800 (29347) | 29347..30273 | + | 927 | WP_000038402.1 | ISNCY family transposase ISRor2 | VF |
| PIC92_RS25805 (30296) | 30296..30493 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| PIC92_RS25810 (30524) | 30524..30775 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| PIC92_RS25815 (31355) | 31355..32203 | + | 849 | WP_113282530.1 | DUF4942 domain-containing protein | - |
| PIC92_RS25820 (32288) | 32288..32623 | - | 336 | WP_000157100.1 | hypothetical protein | - |
| PIC92_RS25825 (32856) | 32856..33188 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| PIC92_RS25830 (33199) | 33199..35898 | + | 2700 | WP_021520371.1 | hypothetical protein | Relaxase |
| PIC92_RS25835 (35935) | 35935..38226 | - | 2292 | WP_021520372.1 | F-type conjugative transfer protein TrbC | - |
| PIC92_RS25840 (38219) | 38219..39289 | - | 1071 | WP_001542508.1 | IncI1-type conjugal transfer protein TrbB | - |
| PIC92_RS25845 (39308) | 39308..40516 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (40696) | 40696..40758 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (40696) | 40696..40758 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (40696) | 40696..40758 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (40696) | 40696..40758 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| PIC92_RS25850 (40808) | 40808..40960 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| PIC92_RS25855 (41032) | 41032..41283 | - | 252 | WP_255081991.1 | hypothetical protein | - |
| PIC92_RS25860 (41784) | 41784..41879 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| PIC92_RS25865 (41944) | 41944..42120 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| PIC92_RS25870 (42512) | 42512..42721 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| PIC92_RS25875 (42793) | 42793..43443 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PIC92_RS25880 (43517) | 43517..45685 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| PIC92_RS25885 (45782) | 45782..46366 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| PIC92_RS25890 (46395) | 46395..47597 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| PIC92_RS25895 (47564) | 47564..48178 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| PIC92_RS25900 (48178) | 48178..51222 | - | 3045 | WP_024227038.1 | IncI1-type conjugal transfer protein TraU | - |
| PIC92_RS25905 (51312) | 51312..52112 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| PIC92_RS25910 (52096) | 52096..52284 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| PIC92_RS25915 (52348) | 52348..52752 | - | 405 | WP_001422824.1 | IncI1-type conjugal transfer protein TraR | - |
| PIC92_RS25920 (52803) | 52803..53330 | - | 528 | WP_022630880.1 | conjugal transfer protein TraQ | - |
| PIC92_RS25925 (53330) | 53330..54034 | - | 705 | WP_271293068.1 | IncI1-type conjugal transfer protein TraP | - |
| PIC92_RS25930 (54034) | 54034..55323 | - | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| PIC92_RS25935 (55326) | 55326..56309 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| PIC92_RS25940 (56320) | 56320..57012 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| PIC92_RS25945 (57009) | 57009..57356 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| PIC92_RS25950 (57374) | 57374..61141 | - | 3768 | WP_053291133.1 | DUF5710 domain-containing protein | - |
| PIC92_RS25955 (61232) | 61232..61783 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| PIC92_RS25960 (61798) | 61798..62088 | - | 291 | WP_071791905.1 | conjugal transfer protein | - |
| PIC92_RS25965 (62085) | 62085..63233 | - | 1149 | WP_001024971.1 | putative protein YggR | VF |
| PIC92_RS25970 (63230) | 63230..64048 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| PIC92_RS25975 (64045) | 64045..64503 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| PIC92_RS25980 (64897) | 64897..65481 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| PIC92_RS25985 (65541) | 65541..66743 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| PIC92_RS25990 (66829) | 66829..67653 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| PIC92_RS25995 (67804) | 67804..68958 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| PIC92_RS26000 (70479) | 70479..70727 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| PIC92_RS26005 (70724) | 70724..72016 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| PIC92_RS26010 (72016) | 72016..72672 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| PIC92_RS26015 (72657) | 72657..73217 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| PIC92_RS26020 (73227) | 73227..73841 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
| PIC92_RS26025 (73859) | 73859..74956 | - | 1098 | WP_001492931.1 | hypothetical protein | VF |
| PIC92_RS26030 (74969) | 74969..76522 | - | 1554 | WP_001492932.1 | hypothetical protein | VF |
| PIC92_RS26035 (76533) | 76533..76985 | - | 453 | WP_012783945.1 | hypothetical protein | VF |
| PIC92_RS26040 (76972) | 76972..78267 | - | 1296 | WP_053291130.1 | type 4b pilus protein PilO2 | - |
| PIC92_RS26045 (78260) | 78260..79942 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| PIC92_RS26050 (79956) | 79956..80393 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| PIC92_RS26055 (80393) | 80393..81460 | - | 1068 | WP_012783947.1 | hypothetical protein | VF |
| PIC92_RS26060 (82084) | 82084..82380 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| PIC92_RS26070 (83883) | 83883..84137 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| PIC92_RS26075 (84299) | 84299..84850 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| PIC92_RS26080 (85023) | 85023..85706 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| PIC92_RS26085 (85960) | 85960..86493 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| PIC92_RS26090 (86935) | 86935..87222 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| PIC92_RS26095 (87260) | 87260..87418 | - | 159 | Protein_96 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|