MGE detailed information
MGE type: Genomic_island MGE length: 43690 bp
Accession: NZ_CP116106 Location: 4148624..4192313 Organism: Escherichia coli strain DETEC-P829 Replicon: chromosome
Accession: NZ_CP116106 Location: 4148624..4192313 Organism: Escherichia coli strain DETEC-P829 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC05_RS20130 (4146230) | 4146230..4146955 | - | 726 | WP_000066573.1 | type 1 fimbria chaperone FimC | - |
| PIC05_RS20135 (4146992) | 4146992..4147531 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| PIC05_RS20140 (4147596) | 4147596..4148144 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| PIC05_RS20145 (4148624) | 4148624..4149220 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| PIC05_RS20150 (4149698) | 4149698..4150300 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| PIC05_RS20155 (4151756) | 4151756..4152472 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PIC05_RS20160 (4152492) | 4152492..4153598 | + | 1107 | WP_001367568.1 | N-acetylneuraminate epimerase | - |
| PIC05_RS20165 (4153663) | 4153663..4154643 | + | 981 | WP_000379695.1 | sialate O-acetylesterase | - |
| PIC05_RS20170 (4154651) | 4154651..4154755 | - | 105 | Protein_3943 | HNH endonuclease | - |
| PIC05_RS20175 (4154855) | 4154855..4154998 | + | 144 | Protein_3944 | HNH endonuclease | - |
| PIC05_RS20180 (4155766) | 4155766..4155915 | - | 150 | Protein_3945 | hypothetical protein | - |
| PIC05_RS20185 (4156000) | 4156000..4156125 | - | 126 | Protein_3946 | hypothetical protein | - |
| PIC05_RS20195 (4157429) | 4157429..4157533 | - | 105 | Protein_3948 | hypothetical protein | - |
| PIC05_RS20200 (4157545) | 4157545..4158036 | - | 492 | WP_001598218.1 | DUF5983 family protein | - |
| PIC05_RS20205 (4158033) | 4158033..4158407 | - | 375 | WP_001598217.1 | TA system toxin CbtA family protein | Toxin Detail |
| PIC05_RS20210 (4158497) | 4158497..4158865 | - | 369 | WP_001598216.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PIC05_RS20215 (4158945) | 4158945..4159166 | - | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| PIC05_RS20220 (4159235) | 4159235..4159711 | - | 477 | WP_032198294.1 | RadC family protein | - |
| PIC05_RS20225 (4159727) | 4159727..4160212 | - | 486 | WP_000206667.1 | antirestriction protein | - |
| PIC05_RS20230 (4160304) | 4160304..4161122 | - | 819 | WP_001598214.1 | DUF932 domain-containing protein | - |
| PIC05_RS20235 (4161461) | 4161461..4164307 | - | 2847 | WP_063854818.1 | Ag43/Cah family autotransporter adhesin | - |
| PIC05_RS20240 (4164680) | 4164680..4165552 | - | 873 | WP_001069764.1 | GTPase family protein | - |
| PIC05_RS20245 (4165637) | 4165637..4166554 | - | 918 | WP_271292830.1 | hypothetical protein | - |
| PIC05_RS20250 (4167816) | 4167816..4168418 | - | 603 | WP_000813432.1 | hypothetical protein | - |
| PIC05_RS20255 (4168512) | 4168512..4168718 | - | 207 | WP_000235219.1 | AlpA family phage regulatory protein | - |
| PIC05_RS20260 (4169492) | 4169492..4169641 | + | 150 | WP_071526287.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| PIC05_RS20265 (4170047) | 4170047..4170247 | - | 201 | WP_001297900.1 | hypothetical protein | - |
| PIC05_RS20270 (4170447) | 4170447..4171016 | + | 570 | WP_241226287.1 | inovirus Gp2 family protein | - |
| PIC05_RS20275 (4171276) | 4171276..4171677 | + | 402 | WP_000271007.1 | putative zinc ribbon protein | - |
| PIC05_RS20280 (4171665) | 4171665..4172099 | + | 435 | WP_001221626.1 | zinc-ribbon domain-containing protein | - |
| PIC05_RS20285 (4173167) | 4173167..4173393 | + | 227 | Protein_3966 | acetolactate synthase small subunit | - |
| PIC05_RS20290 (4173395) | 4173395..4174177 | - | 783 | WP_001305338.1 | DeoR family transcriptional regulator | - |
| PIC05_RS20295 (4174481) | 4174481..4175401 | + | 921 | WP_000350265.1 | ribokinase | - |
| PIC05_RS20300 (4175429) | 4175429..4176745 | + | 1317 | WP_000998349.1 | L-fucose:H+ symporter permease | - |
| PIC05_RS20305 (4176757) | 4176757..4177770 | + | 1014 | WP_000107474.1 | aldose 1-epimerase family protein | - |
| PIC05_RS20310 (4178192) | 4178192..4178446 | + | 255 | WP_001327567.1 | IS66 family transposase IS682 | Transposase |
| PIC05_RS20315 (4178693) | 4178693..4179949 | - | 1257 | WP_000345352.1 | PTS ascorbate transporter subunit IIC | - |
| PIC05_RS20320 (4179962) | 4179962..4180249 | - | 288 | WP_000705927.1 | PTS sugar transporter subunit IIB | - |
| PIC05_RS20325 (4180265) | 4180265..4180708 | - | 444 | WP_000916813.1 | PTS sugar transporter subunit IIA | - |
| PIC05_RS20330 (4180979) | 4180979..4182010 | + | 1032 | WP_000416154.1 | LacI family DNA-binding transcriptional regulator | - |
| PIC05_RS20335 (4182138) | 4182138..4182698 | + | 561 | Protein_3976 | IS110 family transposase ISEc21 | Transposase |
| PIC05_RS20340 (4182717) | 4182717..4183200 | - | 484 | Protein_3977 | IS630 family transposase | - |
| PIC05_RS20345 (4183790) | 4183790..4184084 | - | 295 | Protein_3978 | hypothetical protein | - |
| PIC05_RS20350 (4184262) | 4184262..4184951 | - | 690 | WP_001261214.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| PIC05_RS20355 (4184951) | 4184951..4186507 | - | 1557 | WP_001351184.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| PIC05_RS20360 (4186673) | 4186673..4187497 | + | 825 | WP_001114711.1 | MurR/RpiR family transcriptional regulator | - |
| PIC05_RS20365 (4188621) | 4188621..4189157 | - | 537 | Protein_3982 | hypothetical protein | VF |
| PIC05_RS20370 (4189237) | 4189237..4190258 | + | 1022 | Protein_3983 | IS110 family transposase | - |
| PIC05_RS20375 (4190453) | 4190453..4190670 | - | 218 | Protein_3984 | hypothetical protein | VF |
| PIC05_RS20380 (4191357) | 4191357..4192313 | + | 957 | WP_001598204.1 | hypothetical protein | - |
| PIC05_RS20385 (4192387) | 4192387..4193637 | + | 1251 | WP_000040318.1 | tRNA-guanine transglycosylase DpdA | - |
| PIC05_RS20390 (4193634) | 4193634..4194761 | + | 1128 | WP_089723477.1 | DGQHR domain-containing protein DpdB | - |
| PIC05_RS20395 (4194785) | 4194785..4196968 | - | 2184 | WP_000186145.1 | protein DpdD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|