MGE detailed information
MGE type: Genomic_island MGE length: 18551 bp
Accession: NZ_CP116106 Location: 3776451..3795001 Organism: Escherichia coli strain DETEC-P829 Replicon: chromosome
Accession: NZ_CP116106 Location: 3776451..3795001 Organism: Escherichia coli strain DETEC-P829 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC05_RS18375 (3772031) | 3772031..3772483 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| PIC05_RS18380 (3772480) | 3772480..3773535 | - | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| PIC05_RS18385 (3773606) | 3773606..3774391 | - | 786 | WP_000207590.1 | putative lateral flagellar export/assembly protein LafU | - |
| PIC05_RS18390 (3774363) | 3774363..3776075 | + | 1713 | Protein_3597 | flagellar biosynthesis protein FlhA | - |
| PIC05_RS18395 (3776180) | 3776180..3776458 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| PIC05_RS18400 (3776451) | 3776451..3776807 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| PIC05_RS18405 (3776864) | 3776864..3777637 | - | 774 | WP_000543895.1 | hypothetical protein | VF |
| PIC05_RS18410 (3777823) | 3777823..3778083 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PIC05_RS18415 (3778086) | 3778086..3778364 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PIC05_RS18420 (3778520) | 3778520..3779260 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PIC05_RS18425 (3779231) | 3779231..3779998 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| PIC05_RS18430 (3780204) | 3780204..3780782 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| PIC05_RS18435 (3781022) | 3781022..3783466 | + | 2445 | WP_000973106.1 | Acyl-coenzyme A dehydrogenase | VF |
| PIC05_RS18440 (3783509) | 3783509..3783955 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PIC05_RS18445 (3784136) | 3784136..3784906 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| PIC05_RS18450 (3784948) | 3784948..3786084 | - | 1137 | Protein_3609 | ISAs1 family transposase ISEc1 | Transposase |
| PIC05_RS18455 (3786187) | 3786187..3787313 | - | 1127 | Protein_3610 | ISAs1 family transposase ISEc26 | Transposase |
| PIC05_RS18460 (3787394) | 3787394..3787579 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| PIC05_RS18465 (3787494) | 3787494..3787976 | - | 483 | WP_000939262.1 | protein YdcD | - |
| PIC05_RS18470 (3787960) | 3787960..3792132 | - | 4173 | WP_271292822.1 | Protein RhsD | VF |
| PIC05_RS18475 (3792213) | 3792213..3792407 | - | 195 | WP_000990552.1 | DUF3969 family protein | - |
| PIC05_RS18480 (3792673) | 3792673..3793125 | - | 453 | WP_000960005.1 | hypothetical protein | - |
| PIC05_RS18485 (3793155) | 3793155..3794291 | - | 1137 | Protein_3616 | ISAs1 family transposase ISEc1 | Transposase |
| PIC05_RS18490 (3794552) | 3794552..3795001 | - | 450 | WP_000978828.1 | RHS element protein dsORF-h1 | - |
| PIC05_RS18495 (3795013) | 3795013..3796443 | - | 1431 | Protein_3618 | RHS repeat protein | - |
| PIC05_RS18500 (3796442) | 3796442..3796651 | - | 210 | WP_232592679.1 | DUF6531 domain-containing protein | - |
| PIC05_RS18505 (3796760) | 3796760..3798901 | - | 2142 | WP_000103319.1 | type VI secretion system tip protein VgrG | - |
| PIC05_RS18510 (3799111) | 3799111..3799629 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|