MGE detailed information
MGE type: Genomic_island MGE length: 14508 bp
Accession: NZ_CP116106 Location: 256684..271191 Organism: Escherichia coli strain DETEC-P829 Replicon: chromosome
Accession: NZ_CP116106 Location: 256684..271191 Organism: Escherichia coli strain DETEC-P829 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC05_RS01160 (252478) | 252478..253680 | + | 1203 | WP_000439185.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| PIC05_RS01165 (253995) | 253995..255047 | - | 1053 | WP_001028905.1 | DUF2776 domain-containing protein | - |
| PIC05_RS01170 (255431) | 255431..257055 | + | 1625 | Protein_230 | DUF4049 domain-containing protein | - |
| PIC05_RS01175 (257317) | 257317..258939 | + | 1623 | WP_001315886.1 | DUF4049 domain-containing protein | - |
| PIC05_RS01180 (259129) | 259129..259242 | + | 114 | WP_001296785.1 | protein YhiY | - |
| PIC05_RS01185 (259305) | 259305..260372 | + | 1068 | WP_000361467.1 | HlyD family secretion protein | - |
| PIC05_RS01190 (260369) | 260369..263104 | + | 2736 | WP_000149165.1 | Ribosome-associated ATPase | VF |
| PIC05_RS01195 (263104) | 263104..264228 | + | 1125 | WP_001314210.1 | ABC transporter permease | - |
| PIC05_RS01200 (264301) | 264301..264576 | + | 276 | WP_001259385.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PIC05_RS01205 (264573) | 264573..264932 | + | 360 | WP_000593554.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PIC05_RS01210 (264982) | 264982..265842 | - | 861 | WP_001131782.1 | class II aldolase | - |
| PIC05_RS01215 (265874) | 265874..266143 | - | 270 | WP_000933060.1 | HPr family phosphocarrier protein | - |
| PIC05_RS01220 (266133) | 266133..267641 | - | 1509 | WP_001298718.1 | FGGY-family carbohydrate kinase | - |
| PIC05_RS01225 (267634) | 267634..268992 | - | 1359 | WP_001298729.1 | PTS galactitol transporter subunit IIC | - |
| PIC05_RS01230 (269069) | 269069..269350 | - | 282 | WP_000084022.1 | PTS sugar transporter subunit IIB | - |
| PIC05_RS01235 (269347) | 269347..269820 | - | 474 | WP_001161553.1 | PTS sugar transporter subunit IIA | - |
| PIC05_RS01240 (269845) | 269845..270591 | - | 747 | WP_000839066.1 | GntR family transcriptional regulator | - |
| PIC05_RS01245 (270790) | 270790..271191 | - | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| PIC05_RS01250 (271197) | 271197..272003 | - | 807 | WP_000173666.1 | nickel import ATP-binding protein NikE | - |
| PIC05_RS01255 (272000) | 272000..272764 | - | 765 | WP_001136236.1 | nickel import ATP-binding protein NikD | - |
| PIC05_RS01260 (272764) | 272764..273597 | - | 834 | WP_001008970.1 | nickel ABC transporter permease subunit NikC | - |
| PIC05_RS01265 (273594) | 273594..274538 | - | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| PIC05_RS01270 (274538) | 274538..276112 | - | 1575 | WP_000953356.1 | nickel ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|