MGE detailed information
MGE type: Prophage MGE length: 8604 bp
Accession: NZ_CP116100 Location: 3312296..3320899 Organism: Escherichia coli strain DETEC-P881 Replicon: chromosome
Accession: NZ_CP116100 Location: 3312296..3320899 Organism: Escherichia coli strain DETEC-P881 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC52_RS15920 (3307361) | 3307361..3308464 | + | 1104 | WP_001021994.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| PIC52_RS15925 (3308613) | 3308613..3308879 | + | 267 | WP_001277107.1 | type II toxin-antitoxin system antitoxin AtaR | - |
| PIC52_RS15930 (3308886) | 3308886..3309413 | + | 528 | WP_000342452.1 | type II toxin-antitoxin system toxin acetyltransferase AtaT | - |
| PIC52_RS15935 (3309410) | 3309410..3309793 | - | 384 | WP_000778810.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| PIC52_RS15940 (3310216) | 3310216..3311325 | + | 1110 | WP_001296485.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| PIC52_RS15945 (3311373) | 3311373..3312299 | + | 927 | WP_001295097.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| PIC52_RS15950 (3312296) | 3312296..3313573 | + | 1278 | WP_000803819.1 | branched chain amino acid ABC transporter permease LivM | - |
| PIC52_RS15955 (3313570) | 3313570..3314337 | + | 768 | WP_000082101.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| PIC52_RS15960 (3314339) | 3314339..3315052 | + | 714 | WP_000416895.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| PIC52_RS15965 (3315140) | 3315140..3315361 | + | 222 | WP_000557315.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PIC52_RS15970 (3315358) | 3315358..3315735 | + | 378 | WP_000155160.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| PIC52_RS15975 (3315944) | 3315944..3317260 | + | 1317 | WP_001606337.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| PIC52_RS15980 (3317358) | 3317358..3318245 | + | 888 | WP_001606336.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| PIC52_RS15985 (3318242) | 3318242..3319087 | + | 846 | WP_000572183.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| PIC52_RS15990 (3319089) | 3319089..3320159 | + | 1071 | WP_000907823.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| PIC52_RS15995 (3320156) | 3320156..3320899 | + | 744 | WP_000073605.1 | glycerophosphodiester phosphodiesterase | - |
| PIC52_RS16000 (3320886) | 3320886..3321326 | - | 441 | WP_000826133.1 | DUF2756 family protein | - |
| PIC52_RS16005 (3321446) | 3321446..3323179 | + | 1734 | WP_001606335.1 | gamma-glutamyltransferase | - |
| PIC52_RS16010 (3323217) | 3323217..3323501 | - | 285 | WP_000634165.1 | YrhB family protein | - |
| PIC52_RS16015 (3323701) | 3323701..3323856 | - | 156 | Protein_3125 | hypothetical protein | - |
| PIC52_RS16020 (3323951) | 3323951..3324445 | - | 495 | WP_000988507.1 | protein YrhA | - |
| PIC52_RS16025 (3324442) | 3324442..3325620 | - | 1179 | WP_001606334.1 | Hcp1 family type VI secretion system effector | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|