MGE detailed information
MGE type: Genomic_island MGE length: 54240 bp
Accession: NZ_CP116100 Location: 134081..188320 Organism: Escherichia coli strain DETEC-P881 Replicon: chromosome
Accession: NZ_CP116100 Location: 134081..188320 Organism: Escherichia coli strain DETEC-P881 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC52_RS00640 (129583) | 129583..130101 | - | 519 | WP_001524960.1 | propanediol dehydratase small subunit PduE | - |
| PIC52_RS00645 (130116) | 130116..130784 | - | 669 | WP_000405041.1 | propanediol/glycerol family dehydratase medium subunit | - |
| PIC52_RS00650 (130794) | 130794..132458 | - | 1665 | WP_001607635.1 | propanediol dehydratase large subunit PduC | - |
| PIC52_RS00655 (132477) | 132477..133289 | - | 813 | WP_000097484.1 | propanediol utilization microcompartment protein PduB | - |
| PIC52_RS00660 (133286) | 133286..133570 | - | 285 | WP_001183614.1 | propanediol utilization microcompartment protein PduA | - |
| PIC52_RS00665 (134081) | 134081..134890 | + | 810 | WP_001607634.1 | propanediol diffusion facilitator PduF | - |
| PIC52_RS00670 (135093) | 135093..136007 | + | 915 | WP_000622046.1 | HTH-type transcriptional activator RhaR | VF |
| PIC52_RS00675 (136492) | 136492..136929 | + | 438 | WP_001524956.1 | hypothetical protein | - |
| PIC52_RS00680 (137063) | 137063..137608 | + | 546 | WP_048980648.1 | bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | - |
| PIC52_RS00685 (137605) | 137605..138348 | + | 744 | WP_001297350.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| PIC52_RS00690 (138360) | 138360..139439 | + | 1080 | WP_001166149.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| PIC52_RS00695 (139501) | 139501..140427 | + | 927 | WP_001607632.1 | L,D-transpeptidase | - |
| PIC52_RS00700 (140601) | 140601..141566 | + | 966 | WP_000166254.1 | sugar-binding domain-containing protein | - |
| PIC52_RS00705 (141618) | 141618..142076 | - | 459 | WP_000667216.1 | PTS sugar transporter subunit IIA | - |
| PIC52_RS00710 (142087) | 142087..142371 | - | 285 | WP_000723158.1 | PTS sugar transporter subunit IIB | - |
| PIC52_RS00715 (142395) | 142395..143765 | - | 1371 | WP_000420479.1 | PTS transporter subunit IIC | - |
| PIC52_RS00720 (143769) | 143769..144305 | - | 537 | WP_000850105.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| PIC52_RS00725 (144654) | 144654..145409 | + | 756 | WP_000281586.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| PIC52_RS00730 (145748) | 145748..146191 | + | 444 | WP_001607629.1 | PTS sugar transporter subunit IIA | - |
| PIC52_RS00735 (146210) | 146210..146503 | + | 294 | WP_000608246.1 | PTS sugar transporter subunit IIB | - |
| PIC52_RS00740 (146524) | 146524..147777 | + | 1254 | WP_021555505.1 | PTS transporter subunit IIC | - |
| PIC52_RS00745 (147800) | 147800..148444 | + | 645 | WP_001607627.1 | Ribulose-phosphate 3-epimerase | VF |
| PIC52_RS00750 (148540) | 148540..149292 | + | 753 | WP_001527201.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| PIC52_RS00755 (149307) | 149307..149867 | + | 561 | WP_021540022.1 | 6-phospho-3-hexuloisomerase | - |
| PIC52_RS00765 (150328) | 150328..151245 | + | 918 | WP_001524946.1 | nitrogen assimilation transcriptional regulator NAC | - |
| PIC52_RS00770 (151347) | 151347..152297 | + | 951 | WP_001607622.1 | HTH-type transcriptional regulator Cbl | - |
| PIC52_RS00780 (152415) | 152415..154057 | + | 1643 | Protein_153 | toxic metabolite efflux MATE transporter YeeO | - |
| PIC52_RS00790 (154395) | 154395..155657 | + | 1263 | WP_001607616.1 | Prophage integrase IntS ; Integrase | Integrase |
| PIC52_RS00795 (156352) | 156352..157236 | - | 885 | WP_001607614.1 | hypothetical protein ; Integrase | Integrase |
| PIC52_RS00800 (157744) | 157744..158046 | - | 303 | WP_001553123.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PIC52_RS00805 (158051) | 158051..158380 | - | 330 | WP_001607612.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PIC52_RS00810 (158901) | 158901..159122 | - | 222 | WP_001607610.1 | helix-turn-helix transcriptional regulator | - |
| PIC52_RS00815 (159119) | 159119..159586 | - | 468 | WP_001607609.1 | hypothetical protein | - |
| PIC52_RS00820 (160010) | 160010..164416 | + | 4407 | WP_001607608.1 | hypothetical protein | - |
| PIC52_RS00825 (164577) | 164577..166547 | + | 1971 | WP_001607607.1 | AAA family ATPase | - |
| PIC52_RS00830 (166544) | 166544..168445 | + | 1902 | WP_001607606.1 | ATP-dependent helicase | - |
| PIC52_RS00835 (168621) | 168621..170423 | - | 1803 | WP_001607604.1 | hypothetical protein | - |
| PIC52_RS00840 (170466) | 170466..171473 | - | 1008 | WP_001607603.1 | DUF2220 family protein | - |
| PIC52_RS00845 (171473) | 171473..176056 | - | 4584 | WP_001607602.1 | chromosome partition protein MukB | - |
| PIC52_RS00850 (176053) | 176053..176826 | - | 774 | WP_001607601.1 | chromosome partition protein MukE | - |
| PIC52_RS00855 (176819) | 176819..177322 | - | 504 | WP_000887035.1 | hypothetical protein | - |
| PIC52_RS00860 (177289) | 177289..178218 | - | 930 | WP_271287354.1 | hypothetical protein | - |
| PIC52_RS00865 (178358) | 178358..179353 | - | 996 | WP_024193773.1 | hypothetical protein | - |
| PIC52_RS00870 (180054) | 180054..180770 | - | 717 | WP_001607597.1 | putative transcriptional regulatory protein YeeN | VF |
| PIC52_RS00875 (181113) | 181113..182567 | - | 1455 | WP_001607596.1 | AMP nucleosidase | - |
| PIC52_RS00880 (182669) | 182669..183985 | - | 1317 | WP_001607595.1 | shikimate transporter | - |
| PIC52_RS00885 (184300) | 184300..185352 | + | 1053 | WP_048980477.1 | glycosyltransferase family 9 protein | - |
| PIC52_RS00890 (185522) | 185522..187644 | - | 2123 | Protein_174 | Ig-like domain-containing protein | - |
| PIC52_RS00895 (187571) | 187571..188320 | - | 750 | WP_000039786.1 | hypothetical protein | VF |
| PIC52_RS00900 (188972) | 188972..190993 | - | 2022 | WP_000784549.1 | siderophore yersiniabactin receptor FyuA | - |
| PIC52_RS00905 (191124) | 191124..192701 | - | 1578 | WP_001088826.1 | yersiniabactin biosynthesis salycil-AMP ligase YbtE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|