MGE detailed information
MGE type: Genomic_island MGE length: 11134 bp
Accession: NZ_CP116088 Location: 4158483..4169616 Organism: Escherichia coli strain DETEC-S565 Replicon: chromosome
Accession: NZ_CP116088 Location: 4158483..4169616 Organism: Escherichia coli strain DETEC-S565 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC22_RS20230 (4154209) | 4154209..4156436 | + | 2228 | Protein_3937 | DUF6531 domain-containing protein | - |
| PIC22_RS20235 (4156472) | 4156472..4157386 | + | 915 | Protein_3938 | RHS repeat protein | - |
| PIC22_RS20240 (4157820) | 4157820..4158302 | + | 483 | WP_000939262.1 | protein YdcD | - |
| PIC22_RS20245 (4158217) | 4158217..4158402 | - | 186 | WP_122985282.1 | hypothetical protein | - |
| PIC22_RS20250 (4158483) | 4158483..4159609 | + | 1127 | Protein_3941 | ISAs1 family transposase ISEc26 | Transposase |
| PIC22_RS20255 (4159712) | 4159712..4160848 | + | 1137 | Protein_3942 | ISAs1 family transposase ISEc1 | Transposase |
| PIC22_RS20260 (4160890) | 4160890..4161660 | - | 771 | WP_001118029.1 | 2-oxoglutaramate amidase | - |
| PIC22_RS20265 (4161841) | 4161841..4162287 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| PIC22_RS20270 (4162330) | 4162330..4164774 | - | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| PIC22_RS20275 (4165014) | 4165014..4165592 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| PIC22_RS20280 (4165798) | 4165798..4166565 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| PIC22_RS20285 (4166536) | 4166536..4167276 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| PIC22_RS20290 (4167432) | 4167432..4167710 | - | 279 | WP_000615982.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| PIC22_RS20295 (4167713) | 4167713..4167973 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| PIC22_RS20300 (4168159) | 4168159..4168932 | + | 774 | WP_000543895.1 | hypothetical protein | VF |
| PIC22_RS20305 (4168989) | 4168989..4169345 | - | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| PIC22_RS20310 (4169338) | 4169338..4169616 | - | 279 | WP_000598758.1 | type II toxin-antitoxin system HicA family toxin | - |
| PIC22_RS20315 (4169721) | 4169721..4171433 | - | 1713 | Protein_3954 | flagellar biosynthesis protein FlhA | - |
| PIC22_RS20320 (4171405) | 4171405..4172190 | + | 786 | WP_000207557.1 | putative lateral flagellar export/assembly protein LafU | - |
| PIC22_RS20325 (4172261) | 4172261..4173316 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| PIC22_RS20330 (4173313) | 4173313..4173765 | + | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|