MGE detailed information
MGE type: Genomic_island MGE length: 12735 bp
Accession: NZ_CP116088 Location: 2538646..2551380 Organism: Escherichia coli strain DETEC-S565 Replicon: chromosome
Accession: NZ_CP116088 Location: 2538646..2551380 Organism: Escherichia coli strain DETEC-S565 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC22_RS12555 (2534971) | 2534971..2536179 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| PIC22_RS12560 (2536205) | 2536205..2537536 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| PIC22_RS12565 (2537558) | 2537558..2538547 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| PIC22_RS12570 (2538646) | 2538646..2539584 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| PIC22_RS12575 (2539899) | 2539899..2540117 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| PIC22_RS12580 (2540373) | 2540373..2540912 | + | 540 | WP_000675746.1 | protein YhaB | - |
| PIC22_RS12585 (2540934) | 2540934..2542121 | + | 1188 | WP_000484579.1 | YhaC family protein | - |
| PIC22_RS12590 (2542459) | 2542459..2543439 | + | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| PIC22_RS12600 (2544204) | 2544204..2545349 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| PIC22_RS12605 (2545446) | 2545446..2546336 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| PIC22_RS12610 (2546366) | 2546366..2547136 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| PIC22_RS12615 (2547152) | 2547152..2548486 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| PIC22_RS12620 (2548861) | 2548861..2550432 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| PIC22_RS12625 (2550581) | 2550581..2550916 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| PIC22_RS12630 (2550916) | 2550916..2551380 | + | 465 | WP_000347279.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| PIC22_RS12635 (2551435) | 2551435..2552244 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| PIC22_RS12640 (2552493) | 2552493..2553773 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| PIC22_RS12645 (2553796) | 2553796..2554269 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| PIC22_RS12650 (2554280) | 2554280..2555059 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| PIC22_RS12655 (2555049) | 2555049..2555927 | + | 879 | WP_271291552.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| PIC22_RS12660 (2555945) | 2555945..2556379 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|