MGE detailed information
MGE type: Conjugative plasmid MGE length: 81555 bp
Accession: NZ_CP116087 Location: 1..81555 Organism: Escherichia coli strain DETEC-S566 Replicon: plasmid pDETEC80
Accession: NZ_CP116087 Location: 1..81555 Organism: Escherichia coli strain DETEC-S566 Replicon: plasmid pDETEC80
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC95_RS25165 (101) | 101..361 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| PIC95_RS25170 (594) | 594..668 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| PIC95_RS25175 (661) | 661..1518 | + | 858 | WP_000131001.1 | incFII family plasmid replication initiator RepA | - |
| PIC95_RS25180 (2456) | 2456..3109 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| PIC95_RS25185 (3202) | 3202..3459 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| PIC95_RS25190 (3392) | 3392..3793 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| PIC95_RS25195 (4078) | 4078..5388 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| PIC95_RS25200 (5417) | 5417..5515 | + | 99 | Protein_7 | IS1 family transposase | - |
| PIC95_RS25205 (5665) | 5665..6525 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| PIC95_RS25210 (6824) | 6824..7528 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PIC95_RS25215 (7580) | 7580..7684 | - | 105 | Protein_10 | tunicamycin resistance protein | - |
| PIC95_RS25220 (7697) | 7697..8557 | - | 861 | WP_000557454.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| PIC95_RS25225 (8700) | 8700..9605 | + | 906 | Protein_12 | IS4 family transposase IS10R | Transposase |
| PIC95_RS25230 (9654) | 9654..10358 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PIC95_RS25235 (11875) | 11875..12093 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PIC95_RS25240 (12095) | 12095..12400 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PIC95_RS25245 (12401) | 12401..13210 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| PIC95_RS25250 (13348) | 13348..13623 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| PIC95_RS25255 (13617) | 13617..14261 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| PIC95_RS25260 (14490) | 14490..15461 | + | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| PIC95_RS25265 (15466) | 15466..15858 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| PIC95_RS25270 (15863) | 15863..16114 | - | 252 | Protein_21 | DUF4113 domain-containing protein | - |
| PIC95_RS25275 (16176) | 16176..16973 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| PIC95_RS25280 (16973) | 16973..18145 | - | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| PIC95_RS25285 (18247) | 18247..19268 | - | 1022 | Protein_24 | translesion error-prone DNA polymerase V subunit UmuC | - |
| PIC95_RS25290 (19268) | 19268..19705 | - | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PIC95_RS25295 (19702) | 19702..19950 | - | 249 | WP_000619112.1 | DinI-like family protein | - |
| PIC95_RS25300 (20085) | 20085..20603 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| PIC95_RS25305 (20622) | 20622..21842 | + | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| PIC95_RS25310 (22261) | 22261..23163 | + | 903 | WP_001310012.1 | DUF1281 domain-containing protein | - |
| PIC95_RS25315 (23160) | 23160..23471 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| PIC95_RS25320 (23547) | 23547..24230 | + | 684 | WP_000086169.1 | DNA methylase | - |
| PIC95_RS25325 (24231) | 24231..24452 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| PIC95_RS25330 (24382) | 24382..24900 | + | 519 | WP_223364201.1 | DUF1380 family protein | - |
| PIC95_RS25335 (24945) | 24945..25715 | + | 771 | WP_242812454.1 | hypothetical protein | - |
| PIC95_RS25340 (26131) | 26131..26556 | + | 426 | WP_001198903.1 | antirestriction protein | - |
| PIC95_RS25345 (26603) | 26603..27025 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| PIC95_RS25350 (27022) | 27022..27213 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| PIC95_RS25355 (28176) | 28176..28406 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| PIC95_RS25360 (28458) | 28458..29819 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| PIC95_RS25365 (29866) | 29866..30429 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| PIC95_RS25370 (30515) | 30515..30967 | - | 453 | WP_024185774.1 | hypothetical protein | - |
| PIC95_RS25375 (31269) | 31269..31796 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| PIC95_RS25380 (31853) | 31853..32086 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| PIC95_RS25385 (32145) | 32145..34103 | + | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| PIC95_RS25390 (34158) | 34158..34592 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| PIC95_RS25395 (34589) | 34589..35352 | + | 764 | Protein_46 | plasmid SOS inhibition protein A | - |
| - (35320) | 35320..35519 | + | 200 | NuclAT_0 | - | - |
| - (35320) | 35320..35519 | + | 200 | NuclAT_0 | - | - |
| - (35320) | 35320..35519 | + | 200 | NuclAT_0 | - | - |
| - (35320) | 35320..35519 | + | 200 | NuclAT_0 | - | - |
| PIC95_RS25400 (35526) | 35526..35675 | + | 150 | Protein_47 | DUF5431 family protein | - |
| PIC95_RS25405 (35617) | 35617..35742 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| PIC95_RS25410 (36060) | 36060..36357 | - | 298 | Protein_49 | hypothetical protein | - |
| PIC95_RS25415 (36658) | 36658..36945 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| PIC95_RS25420 (37064) | 37064..37885 | + | 822 | WP_001234489.1 | DUF932 domain-containing protein | - |
| PIC95_RS25425 (38181) | 38181..38783 | - | 603 | WP_001323326.1 | hypothetical protein | VF |
| PIC95_RS25430 (39114) | 39114..39497 | + | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PIC95_RS25435 (39691) | 39691..40377 | + | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| PIC95_RS25440 (40471) | 40471..40698 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| PIC95_RS25445 (40732) | 40732..41091 | + | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| PIC95_RS25450 (41106) | 41106..41417 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| PIC95_RS25455 (41439) | 41439..42005 | + | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| PIC95_RS25460 (41992) | 41992..42720 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| PIC95_RS25465 (42720) | 42720..44021 | + | 1302 | Protein_60 | conjugal transfer protein TraB | - |
| PIC95_RS25470 (44053) | 44053..45666 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| PIC95_RS25475 (45697) | 45697..46047 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| PIC95_RS25480 (46044) | 46044..46469 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| PIC95_RS25485 (46556) | 46556..46687 | + | 132 | Protein_64 | conjugal transfer protein TraB | - |
| PIC95_RS25490 (46677) | 46677..47267 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| PIC95_RS25495 (47254) | 47254..47574 | + | 321 | WP_001057275.1 | conjugal transfer protein TrbD | - |
| PIC95_RS25500 (47567) | 47567..47819 | + | 253 | Protein_67 | conjugal transfer protein TrbG | - |
| PIC95_RS25505 (47816) | 47816..48331 | + | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| PIC95_RS25510 (48466) | 48466..48687 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| PIC95_RS25515 (48680) | 48680..49153 | + | 474 | WP_000549566.1 | hypothetical protein | - |
| PIC95_RS25520 (49233) | 49233..49451 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| PIC95_RS25525 (49818) | 49818..51443 | + | 1626 | Protein_72 | TraC family protein | - |
| PIC95_RS25530 (51530) | 51530..52276 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| PIC95_RS25535 (52291) | 52291..53832 | - | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| PIC95_RS25540 (54027) | 54027..55034 | + | 1008 | Protein_75 | type IV secretion system protein TraC | - |
| PIC95_RS25545 (55031) | 55031..55417 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| PIC95_RS25550 (55414) | 55414..56046 | + | 633 | WP_001203736.1 | type-F conjugative transfer system protein TraW | - |
| PIC95_RS25555 (56043) | 56043..57035 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| PIC95_RS25560 (57065) | 57065..57370 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| PIC95_RS25565 (57379) | 57379..58017 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| PIC95_RS25570 (58014) | 58014..59864 | + | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| PIC95_RS25575 (59891) | 59891..60148 | + | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| PIC95_RS25580 (60141) | 60141..60884 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| PIC95_RS25585 (60898) | 60898..61239 | + | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| PIC95_RS25590 (61220) | 61220..61555 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| PIC95_RS25595 (61636) | 61636..61920 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PIC95_RS25600 (61907) | 61907..62452 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| PIC95_RS25605 (62382) | 62382..62729 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| PIC95_RS25610 (62710) | 62710..63102 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| PIC95_RS25615 (63089) | 63089..64462 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| PIC95_RS25620 (64459) | 64459..67281 | + | 2823 | WP_001007080.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| PIC95_RS25625 (67297) | 67297..67782 | + | 486 | WP_000605869.1 | hypothetical protein | - |
| PIC95_RS25630 (67831) | 67831..68562 | + | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| PIC95_RS25635 (68765) | 68765..69502 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| PIC95_RS25640 (69553) | 69553..71868 | + | 2316 | WP_042095420.1 | Coupling protein TraD | VF |
| PIC95_RS25645 (71868) | 71868..77138 | + | 5271 | WP_000948348.1 | Multifunctional conjugation protein TraI | Relaxase |
| PIC95_RS25650 (77158) | 77158..77904 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| PIC95_RS25655 (77963) | 77963..78823 | + | 861 | WP_000704523.1 | Quorum-quenching protein AidA | VF |
| PIC95_RS25660 (78926) | 78926..79486 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| PIC95_RS25665 (79615) | 79615..79827 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| PIC95_RS25670 (80072) | 80072..80533 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| PIC95_RS25675 (80579) | 80579..80788 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| PIC95_RS25680 (80826) | 80826..81416 | + | 591 | WP_001545650.1 | DUF2726 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|