MGE detailed information
MGE type: Genomic_island MGE length: 50165 bp
Accession: NZ_CP116085 Location: 3811939..3862103 Organism: Escherichia coli strain DETEC-S566 Replicon: chromosome
Accession: NZ_CP116085 Location: 3811939..3862103 Organism: Escherichia coli strain DETEC-S566 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC95_RS18980 (3808140) | 3808140..3808727 | + | 588 | WP_001545822.1 | transcriptional regulator BetI | - |
| PIC95_RS18985 (3808741) | 3808741..3810213 | + | 1473 | WP_001545821.1 | betaine-aldehyde dehydrogenase | - |
| PIC95_RS18990 (3810227) | 3810227..3811897 | + | 1671 | WP_001159126.1 | choline dehydrogenase | - |
| PIC95_RS18995 (3812979) | 3812979..3813542 | + | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| PIC95_RS19000 (3813872) | 3813872..3814666 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| PIC95_RS19005 (3814820) | 3814820..3815581 | + | 762 | WP_001524129.1 | protein HyxA | - |
| PIC95_RS19010 (3815623) | 3815623..3817914 | + | 2292 | WP_000798071.1 | outer membrane autotransporter HyxB | - |
| PIC95_RS19015 (3818098) | 3818098..3818766 | + | 669 | WP_001545820.1 | protein YkgH | - |
| PIC95_RS19020 (3819009) | 3819009..3819704 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| PIC95_RS19025 (3819697) | 3819697..3821124 | - | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| PIC95_RS19030 (3821135) | 3821135..3821854 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| PIC95_RS19035 (3822380) | 3822380..3823234 | - | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| PIC95_RS19040 (3823461) | 3823461..3824786 | + | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| PIC95_RS19045 (3824895) | 3824895..3825131 | + | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| PIC95_RS19050 (3825143) | 3825143..3825736 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| PIC95_RS19055 (3825896) | 3825896..3826765 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| PIC95_RS19060 (3827013) | 3827013..3827870 | + | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| PIC95_RS19065 (3827995) | 3827995..3832242 | - | 4248 | WP_000092553.1 | hypothetical protein | VF |
| PIC95_RS19070 (3832808) | 3832808..3833659 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| PIC95_RS19075 (3833686) | 3833686..3834675 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| PIC95_RS19080 (3834706) | 3834706..3835599 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| PIC95_RS19085 (3835799) | 3835799..3836725 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| PIC95_RS19090 (3837008) | 3837008..3837988 | - | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| PIC95_RS19095 (3838081) | 3838081..3839001 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| PIC95_RS19100 (3839174) | 3839174..3840316 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| PIC95_RS19105 (3840789) | 3840789..3840890 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| PIC95_RS19110 (3841255) | 3841255..3841518 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| PIC95_RS19115 (3841518) | 3841518..3841658 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| PIC95_RS19120 (3841693) | 3841693..3841918 | - | 226 | Protein_3747 | protein YkgL | - |
| PIC95_RS19125 (3842742) | 3842742..3843284 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| PIC95_RS19130 (3843359) | 3843359..3843946 | + | 588 | WP_001545819.1 | Common pilus major fimbrillin subunit EcpA | VF |
| PIC95_RS19135 (3844003) | 3844003..3844671 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| PIC95_RS19140 (3844697) | 3844697..3847222 | + | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| PIC95_RS19145 (3847212) | 3847212..3848855 | + | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| PIC95_RS19150 (3848824) | 3848824..3849534 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| PIC95_RS19155 (3849841) | 3849841..3850170 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| PIC95_RS19160 (3850182) | 3850182..3850348 | - | 167 | Protein_3755 | tail fiber assembly protein | - |
| PIC95_RS19165 (3850419) | 3850419..3851033 | - | 615 | WP_001019923.1 | YagU family protein | - |
| PIC95_RS19170 (3851248) | 3851248..3851433 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| PIC95_RS19175 (3851482) | 3851482..3851640 | + | 159 | Protein_3758 | integrase | - |
| PIC95_RS19180 (3851867) | 3851867..3852202 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| PIC95_RS19185 (3852410) | 3852410..3853186 | + | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| PIC95_RS19190 (3853351) | 3853351..3854271 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| PIC95_RS19195 (3854258) | 3854258..3855040 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| PIC95_RS19200 (3855324) | 3855324..3858422 | + | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| PIC95_RS19205 (3858416) | 3858416..3860053 | + | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| PIC95_RS19210 (3860043) | 3860043..3861290 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| PIC95_RS19215 (3861497) | 3861497..3861655 | + | 159 | WP_071550417.1 | ash family protein | - |
| PIC95_RS19220 (3861633) | 3861633..3862103 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| PIC95_RS19225 (3862249) | 3862249..3862452 | + | 204 | Protein_3768 | integrase | - |
| PIC95_RS19235 (3862657) | 3862657..3863910 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| PIC95_RS19240 (3863922) | 3863922..3865025 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| PIC95_RS19245 (3865314) | 3865314..3866369 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| PIC95_RS19250 (3866408) | 3866408..3866809 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|