MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 42640 bp
Accession: NZ_CP116078 Location: 1..42640 Organism: Escherichia coli strain DETEC-S586 Replicon: plasmid pDETEC49
Accession: NZ_CP116078 Location: 1..42640 Organism: Escherichia coli strain DETEC-S586 Replicon: plasmid pDETEC49
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC49_RS25520 (PIC49_25525) | 430..780 | + | 351 | WP_001419804.1 | hypothetical protein | - |
| PIC49_RS25525 (PIC49_25530) | 923..1597 | + | 675 | WP_228295637.1 | SLATT domain-containing protein | - |
| PIC49_RS25530 (PIC49_25535) | 1749..2522 | - | 774 | WP_106668251.1 | hypothetical protein | - |
| PIC49_RS25535 (PIC49_25540) | 2691..3116 | + | 426 | WP_012300440.1 | hypothetical protein | - |
| PIC49_RS25540 (PIC49_25545) | 3237..3494 | - | 258 | WP_000527006.1 | hypothetical protein | - |
| PIC49_RS25545 (PIC49_25550) | 4051..4353 | + | 303 | WP_000691019.1 | type II toxin-antitoxin system HigB family toxin | - |
| PIC49_RS25550 (PIC49_25555) | 4359..4718 | + | 360 | WP_001716067.1 | transcriptional regulator | - |
| PIC49_RS25555 (PIC49_25560) | 5252..5500 | - | 249 | WP_000312658.1 | hypothetical protein | - |
| PIC49_RS25560 (PIC49_25565) | 6422..7246 | + | 825 | WP_106668252.1 | Tyrosine recombinase XerD | VF |
| PIC49_RS25565 (PIC49_25570) | 7351..8010 | + | 660 | WP_000516222.1 | hypothetical protein | VF |
| PIC49_RS25570 (PIC49_25575) | 8102..8404 | + | 303 | WP_001096507.1 | hypothetical protein | - |
| PIC49_RS25575 (PIC49_25580) | 8643..9876 | + | 1234 | Protein_12 | IS1380 family transposase ISEcp1 | Transposase |
| PIC49_RS25580 (PIC49_25585) | 10126..11001 | + | 876 | WP_012579082.1 | Beta-lactamase Toho-1 | ARG |
| PIC49_RS25585 (PIC49_25590) | 11036..11728 | + | 693 | Protein_14 | IS5 family transposase IS903B | Transposase |
| PIC49_RS25590 (PIC49_25595) | 12380..12907 | - | 528 | WP_000577045.1 | DUF2726 domain-containing protein | - |
| PIC49_RS25595 (PIC49_25600) | 13043..13447 | - | 405 | WP_001541973.1 | hypothetical protein | - |
| PIC49_RS25600 (PIC49_25605) | 13513..14520 | - | 1008 | WP_000243324.1 | replication initiation protein | - |
| PIC49_RS25605 (PIC49_25610) | 16063..16392 | + | 330 | WP_001541974.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PIC49_RS25610 (PIC49_25615) | 16373..16654 | + | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| PIC49_RS25615 (PIC49_25620) | 16669..16995 | + | 327 | WP_129914608.1 | DNA-binding protein | - |
| PIC49_RS25620 (PIC49_25625) | 17632..18147 | + | 516 | WP_129914607.1 | J domain-containing protein | - |
| PIC49_RS25625 (PIC49_25630) | 18253..18795 | + | 543 | WP_129914606.1 | hypothetical protein | - |
| PIC49_RS25630 (PIC49_25635) | 18792..19046 | + | 255 | WP_129914605.1 | hypothetical protein | Toxin Detail |
| PIC49_RS25635 (PIC49_25640) | 19043..19273 | + | 231 | WP_129914604.1 | XRE family transcriptional regulator | Antitoxin Detail |
| PIC49_RS25640 (PIC49_25645) | 19875..20147 | + | 273 | WP_106668253.1 | hypothetical protein | - |
| PIC49_RS25645 (PIC49_25650) | 20220..20519 | + | 300 | WP_129914603.1 | hypothetical protein | - |
| PIC49_RS25650 (PIC49_25655) | 20831..21079 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PIC49_RS25655 (PIC49_25660) | 21076..21423 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PIC49_RS25660 (PIC49_25665) | 21787..22290 | + | 504 | WP_000781817.1 | DNA distortion polypeptide 1 | - |
| PIC49_RS25665 (PIC49_25670) | 22294..23523 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| PIC49_RS25670 (PIC49_25675) | 23600..23866 | + | 267 | WP_000134734.1 | hypothetical protein | - |
| PIC49_RS25675 (PIC49_25680) | 23871..24104 | + | 234 | WP_000120384.1 | EexN family lipoprotein | - |
| PIC49_RS25680 (PIC49_25685) | 24464..25084 | + | 621 | WP_000157548.1 | Type IV secretion system protein virB1 | VF |
| PIC49_RS25685 (PIC49_25690) | 25098..25424 | + | 327 | WP_000008645.1 | Type IV secretion system protein virB2 | VF |
| PIC49_RS25690 (PIC49_25695) | 25443..28190 | + | 2748 | WP_000105982.1 | Type IV secretion system protein virB4 | VF |
| PIC49_RS25695 (PIC49_25700) | 28202..28918 | + | 717 | WP_129914601.1 | type IV secretion system protein | - |
| PIC49_RS25700 (PIC49_25705) | 28929..30008 | + | 1080 | WP_000007790.1 | hypothetical protein | VF |
| PIC49_RS25705 (PIC49_25710) | 30505..31191 | + | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| PIC49_RS25710 (PIC49_25715) | 31188..32096 | + | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| PIC49_RS25715 (PIC49_25720) | 32089..33207 | + | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| PIC49_RS25720 (PIC49_25725) | 33209..34237 | + | 1029 | WP_000017225.1 | Type IV secretion system protein VirB11 | VF |
| PIC49_RS25725 (PIC49_25730) | 34224..36086 | + | 1863 | WP_000847106.1 | relaxosome-coupling protein TaxB | - |
| PIC49_RS25730 (PIC49_25735) | 36095..36517 | + | 423 | WP_015059903.1 | cag pathogenicity island Cag12 family protein | - |
| PIC49_RS25735 (PIC49_25740) | 36501..36806 | + | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PIC49_RS25740 (PIC49_25745) | 36812..37066 | + | 255 | WP_000415096.1 | hypothetical protein | - |
| PIC49_RS25745 (PIC49_25750) | 37169..37477 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| PIC49_RS25750 (PIC49_25755) | 37474..37968 | + | 495 | WP_001215682.1 | thermonuclease family protein | - |
| PIC49_RS25755 (PIC49_25760) | 37984..38388 | + | 405 | WP_021548625.1 | hypothetical protein | - |
| PIC49_RS25760 (PIC49_25765) | 38448..38771 | + | 324 | WP_106668249.1 | hypothetical protein | - |
| PIC49_RS25765 (PIC49_25770) | 38776..39015 | + | 240 | WP_241389068.1 | hypothetical protein | - |
| PIC49_RS25770 (PIC49_25775) | 39126..39386 | + | 261 | Protein_51 | DNA topoisomerase III | - |
| PIC49_RS25775 (PIC49_25780) | 39391..41544 | + | 2154 | WP_106668250.1 | type IA DNA topoisomerase | - |
| PIC49_RS25780 (PIC49_25785) | 41541..41747 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| PIC49_RS25785 (PIC49_25790) | 41763..42227 | + | 465 | WP_001419802.1 | H-NS family nucleoid-associated regulatory protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|