MGE detailed information
MGE type: Genomic_island MGE length: 16544 bp
Accession: NZ_CP116074 Location: 4250844..4267387 Organism: Escherichia coli strain DETEC-S586 Replicon: chromosome
Accession: NZ_CP116074 Location: 4250844..4267387 Organism: Escherichia coli strain DETEC-S586 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC49_RS20405 (4247374) | 4247374..4248099 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| PIC49_RS20410 (4248136) | 4248136..4248675 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| PIC49_RS20415 (4248740) | 4248740..4249288 | - | 549 | WP_000695557.1 | type 1 fimbrial major subunit FimA | - |
| PIC49_RS20420 (4249770) | 4249770..4250366 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| PIC49_RS20425 (4250844) | 4250844..4251446 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| PIC49_RS20430 (4252901) | 4252901..4253617 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PIC49_RS20435 (4253637) | 4253637..4254743 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| PIC49_RS20440 (4254808) | 4254808..4255788 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| PIC49_RS20445 (4255898) | 4255898..4256103 | + | 206 | Protein_4001 | HNH endonuclease | - |
| PIC49_RS20450 (4256371) | 4256371..4257611 | - | 1241 | Protein_4002 | helicase YjhR | - |
| PIC49_RS20455 (4257727) | 4257727..4257858 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| PIC49_RS20460 (4258349) | 4258349..4258606 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| PIC49_RS20465 (4258618) | 4258618..4259163 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| PIC49_RS20470 (4259219) | 4259219..4259965 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| PIC49_RS20475 (4260134) | 4260134..4260352 | + | 219 | Protein_4007 | hypothetical protein | - |
| PIC49_RS20480 (4260390) | 4260390..4260506 | + | 117 | Protein_4008 | VOC family protein | - |
| PIC49_RS20485 (4260751) | 4260751..4261872 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| PIC49_RS20490 (4261869) | 4261869..4262147 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| PIC49_RS20495 (4262159) | 4262159..4263472 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| PIC49_RS20500 (4263485) | 4263485..4264291 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| PIC49_RS20505 (4264422) | 4264422..4264853 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| PIC49_RS20510 (4264865) | 4264865..4265497 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| PIC49_RS20515 (4265514) | 4265514..4266296 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| PIC49_RS20520 (4266599) | 4266599..4267387 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| PIC49_RS20525 (4267392) | 4267392..4268297 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| PIC49_RS20530 (4268308) | 4268308..4270275 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| PIC49_RS20535 (4270382) | 4270382..4271731 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|