MGE detailed information
MGE type: Prophage MGE length: 47622 bp
Accession: NZ_CP116071 Location: 4781501..4829122 Organism: Escherichia coli strain DETEC-S589 Replicon: chromosome
Accession: NZ_CP116071 Location: 4781501..4829122 Organism: Escherichia coli strain DETEC-S589 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC30_RS23630 (4776697) | 4776697..4778745 | + | 2049 | WP_000149529.1 | FAD-binding protein | - |
| PIC30_RS23635 (4778851) | 4778851..4779834 | + | 984 | WP_001007672.1 | quinone oxidoreductase | - |
| PIC30_RS23640 (4779999) | 4779999..4780241 | - | 243 | WP_000891396.1 | envelope stress response protein PspG | - |
| PIC30_RS23645 (4780375) | 4780375..4781412 | - | 1038 | WP_001552194.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| PIC30_RS23650 (4781501) | 4781501..4782598 | + | 1098 | WP_000332258.1 | hypothetical protein ; Integrase | Integrase |
| PIC30_RS23655 (4782660) | 4782660..4782908 | + | 249 | WP_001217546.1 | DinI-like family protein | - |
| PIC30_RS23660 (4783199) | 4783199..4783393 | - | 195 | Protein_4637 | hypothetical protein | - |
| PIC30_RS23665 (4783403) | 4783403..4783681 | - | 279 | WP_001204579.1 | hypothetical protein | - |
| PIC30_RS23670 (4783678) | 4783678..4785744 | - | 2067 | WP_001552192.1 | prophage tail fiber N-terminal domain-containing protein | - |
| PIC30_RS23675 (4785809) | 4785809..4786395 | - | 587 | Protein_4640 | hypothetical protein | VF |
| PIC30_RS23680 (4786463) | 4786463..4790161 | - | 3699 | WP_000515673.1 | phage tail protein | - |
| PIC30_RS23685 (4790222) | 4790222..4790770 | - | 549 | WP_000847631.1 | tail assembly protein | - |
| PIC30_RS23690 (4790767) | 4790767..4791510 | - | 744 | WP_000140743.1 | C40 family peptidase | - |
| PIC30_RS23695 (4791516) | 4791516..4792214 | - | 699 | WP_001152449.1 | phage minor tail protein L | - |
| PIC30_RS23700 (4792214) | 4792214..4792570 | - | 357 | WP_001330090.1 | phage tail protein | - |
| PIC30_RS23705 (4792548) | 4792548..4795775 | - | 3228 | WP_001552446.1 | phage tail tape measure protein | - |
| PIC30_RS23710 (4795822) | 4795822..4796112 | - | 291 | WP_001211636.1 | DUF4035 domain-containing protein | - |
| PIC30_RS23715 (4796124) | 4796124..4796495 | - | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| PIC30_RS23720 (4796510) | 4796510..4797214 | - | 705 | WP_000097526.1 | immunoglobulin domain-containing protein | - |
| PIC30_RS23725 (4797275) | 4797275..4797619 | - | 345 | WP_001206306.1 | DUF3168 domain-containing protein | - |
| PIC30_RS23730 (4797616) | 4797616..4798062 | - | 447 | WP_000347792.1 | HK97 gp10 family phage protein | - |
| PIC30_RS23735 (4798062) | 4798062..4798400 | - | 339 | WP_001147814.1 | phage head closure protein | - |
| PIC30_RS23740 (4798409) | 4798409..4798726 | - | 318 | WP_000719066.1 | head-tail connector protein | - |
| PIC30_RS23745 (4798803) | 4798803..4800020 | - | 1218 | WP_000766108.1 | phage major capsid protein | - |
| PIC30_RS23750 (4800035) | 4800035..4800634 | - | 600 | WP_000999828.1 | HK97 family phage prohead protease | - |
| PIC30_RS23755 (4800627) | 4800627..4801853 | - | 1227 | WP_000923131.1 | phage portal protein | - |
| PIC30_RS23760 (4801843) | 4801843..4802004 | - | 162 | WP_000811487.1 | hypothetical protein | - |
| PIC30_RS23765 (4802001) | 4802001..4803758 | - | 1758 | WP_001140907.1 | terminase large subunit | - |
| PIC30_RS23770 (4803758) | 4803758..4804240 | - | 483 | WP_271287403.1 | phage terminase small subunit P27 family | - |
| PIC30_RS23775 (4804388) | 4804388..4804738 | - | 351 | WP_001140109.1 | HNH endonuclease signature motif containing protein | - |
| PIC30_RS23780 (4804843) | 4804843..4805025 | - | 183 | WP_032145233.1 | Rz1 family lipoprotein | - |
| PIC30_RS23785 (4805242) | 4805242..4805775 | - | 534 | WP_001274707.1 | lysozyme | - |
| PIC30_RS23790 (4805831) | 4805831..4806145 | - | 315 | WP_000193273.1 | YdfR family protein | - |
| PIC30_RS23795 (4806150) | 4806150..4806365 | - | 216 | WP_024186198.1 | class II holin family protein | - |
| PIC30_RS23800 (4806916) | 4806916..4807647 | - | 732 | WP_001318187.1 | hypothetical protein | VF |
| PIC30_RS23805 (4807683) | 4807683..4808090 | - | 408 | WP_000489186.1 | subtilase family AB5 toxin binding subunit | - |
| PIC30_RS23810 (4808404) | 4808404..4808775 | - | 372 | WP_001204822.1 | antiterminator Q family protein | - |
| PIC30_RS23815 (4808793) | 4808793..4809782 | - | 990 | WP_021038222.1 | DUF968 domain-containing protein | - |
| PIC30_RS23820 (4809790) | 4809790..4810587 | - | 798 | WP_001061397.1 | KilA-N domain-containing protein | - |
| PIC30_RS23825 (4810607) | 4810607..4810996 | - | 390 | WP_097494674.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PIC30_RS23830 (4810993) | 4810993..4811319 | - | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| PIC30_RS23835 (4811316) | 4811316..4811969 | - | 654 | WP_001355692.1 | phage N-6-adenine-methyltransferase | - |
| PIC30_RS23840 (4811969) | 4811969..4812463 | - | 495 | WP_166709515.1 | PerC family transcriptional regulator | - |
| PIC30_RS23845 (4812460) | 4812460..4813452 | - | 993 | WP_097494691.1 | hypothetical protein | - |
| PIC30_RS23850 (4813409) | 4813409..4813621 | - | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| PIC30_RS23855 (4813797) | 4813797..4814381 | - | 585 | WP_000514174.1 | YmfL family putative regulatory protein | - |
| PIC30_RS23860 (4814419) | 4814419..4814619 | - | 201 | WP_000205494.1 | Cro/CI family transcriptional regulator | - |
| PIC30_RS23865 (4814717) | 4814717..4815343 | + | 627 | WP_097494690.1 | LexA family transcriptional regulator | - |
| PIC30_RS23870 (4815699) | 4815699..4816193 | - | 495 | WP_000196298.1 | hypothetical protein | - |
| PIC30_RS23875 (4816751) | 4816751..4817113 | + | 363 | WP_000135680.1 | protein YfdP | - |
| PIC30_RS23880 (4817179) | 4817179..4818003 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| PIC30_RS23885 (4818131) | 4818131..4818667 | + | 537 | WP_032340541.1 | 5'-deoxynucleotidase | - |
| PIC30_RS23890 (4818658) | 4818658..4819008 | + | 351 | WP_032340539.1 | hypothetical protein | - |
| PIC30_RS23895 (4819005) | 4819005..4819604 | + | 600 | WP_032340538.1 | ead/Ea22-like family protein | - |
| PIC30_RS23900 (4819606) | 4819606..4819797 | + | 192 | WP_016236813.1 | hypothetical protein | - |
| PIC30_RS23905 (4819800) | 4819800..4820114 | + | 315 | Protein_4686 | DUF551 domain-containing protein | - |
| PIC30_RS23910 (4820361) | 4820361..4820552 | + | 192 | WP_229430275.1 | DUF551 domain-containing protein | - |
| PIC30_RS23915 (4820552) | 4820552..4821124 | + | 573 | WP_001061345.1 | 3'-5' exonuclease | - |
| PIC30_RS23920 (4821161) | 4821161..4821442 | + | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| PIC30_RS23925 (4821490) | 4821490..4821663 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| PIC30_RS23930 (4821703) | 4821703..4822089 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| PIC30_RS23935 (4822119) | 4822119..4822628 | - | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| PIC30_RS23940 (4823162) | 4823162..4823677 | + | 516 | WP_000416264.1 | zinc uptake transcriptional repressor Zur | - |
| PIC30_RS23945 (4823719) | 4823719..4823928 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| PIC30_RS23950 (4824044) | 4824044..4825369 | - | 1326 | WP_001296637.1 | MATE family efflux transporter DinF | - |
| PIC30_RS23955 (4825442) | 4825442..4826050 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| PIC30_RS23960 (4826160) | 4826160..4826528 | - | 369 | WP_000002899.1 | diacylglycerol kinase | - |
| PIC30_RS23965 (4826699) | 4826699..4829122 | + | 2424 | WP_136669798.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| PIC30_RS23970 (4829275) | 4829275..4830147 | - | 873 | WP_000455225.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| PIC30_RS23975 (4830160) | 4830160..4830657 | - | 498 | WP_000019227.1 | chorismate lyase | - |
| PIC30_RS23980 (4830836) | 4830836..4831756 | - | 921 | WP_001298285.1 | maltose operon protein MalM | - |
| PIC30_RS23985 (4832079) | 4832079..4833419 | - | 1341 | WP_000973666.1 | maltoporin LamB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|