MGE detailed information
MGE type: Prophage MGE length: 52542 bp
Accession: NZ_CP116071 Location: 2783397..2835938 Organism: Escherichia coli strain DETEC-S589 Replicon: chromosome
Accession: NZ_CP116071 Location: 2783397..2835938 Organism: Escherichia coli strain DETEC-S589 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PIC30_RS13620 () | 2779647..2781005 | + | 1359 | WP_001195306.1 | bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF | - |
| PIC30_RS13625 () | 2781017..2782210 | + | 1194 | WP_000209529.1 | tryptophan synthase subunit beta | - |
| PIC30_RS13630 () | 2782210..2783016 | + | 807 | WP_000443098.1 | tryptophan synthase subunit alpha | - |
| PIC30_RS13635 () | 2783397..2783576 | + | 180 | WP_000134814.1 | general stress protein | - |
| PIC30_RS13640 () | 2783662..2784162 | + | 501 | WP_001056507.1 | ferritin-like domain-containing protein | - |
| PIC30_RS13645 () | 2784208..2784714 | + | 507 | WP_001079492.1 | ferritin-like domain-containing protein | - |
| PIC30_RS13650 () | 2784773..2784898 | - | 126 | Protein_2677 | outer membrane protein OmpW | - |
| PIC30_RS13655 () | 2785202..2785372 | - | 171 | WP_000251936.1 | hypothetical protein | - |
| PIC30_RS13660 () | 2785487..2785651 | - | 165 | Protein_2679 | tail fiber assembly protein | - |
| PIC30_RS13665 () | 2785813..2786481 | + | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| PIC30_RS13670 () | 2786536..2787120 | - | 585 | WP_000885580.1 | tail fiber assembly protein | - |
| PIC30_RS13675 () | 2787120..2790227 | - | 3108 | WP_000216497.1 | phage tail protein | - |
| PIC30_RS13680 () | 2790379..2790978 | - | 600 | WP_001233195.1 | Outer membrane protein X | VF |
| PIC30_RS13685 () | 2791046..2794525 | - | 3480 | WP_166709548.1 | host specificity protein J | - |
| PIC30_RS13690 () | 2794592..2794930 | - | 339 | WP_001332187.1 | hypothetical protein | - |
| PIC30_RS13695 () | 2795004..2795579 | - | 576 | WP_119682227.1 | tail assembly protein | - |
| PIC30_RS13700 () | 2795543..2796286 | - | 744 | WP_000140762.1 | C40 family peptidase | - |
| PIC30_RS13705 () | 2796291..2796989 | - | 699 | WP_001152522.1 | phage minor tail protein L | - |
| PIC30_RS13710 () | 2796989..2797318 | - | 330 | WP_000847402.1 | phage tail protein | - |
| PIC30_RS13715 () | 2797315..2799888 | - | 2574 | WP_000082348.1 | phage tail tape measure protein | - |
| PIC30_RS13720 () | 2799869..2800282 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| PIC30_RS13725 () | 2800309..2800740 | - | 432 | WP_000479095.1 | phage minor tail protein G | - |
| PIC30_RS13730 () | 2800754..2801506 | - | 753 | WP_000235110.1 | phage tail protein | - |
| PIC30_RS13735 () | 2801514..2801909 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| PIC30_RS13740 () | 2801906..2802439 | - | 534 | WP_000974980.1 | phage tail protein | - |
| PIC30_RS13745 () | 2802455..2802808 | - | 354 | WP_001204554.1 | head-tail joining protein | - |
| PIC30_RS13750 () | 2802801..2803184 | - | 384 | WP_000201495.1 | DNA-packaging protein FI | - |
| PIC30_RS13755 () | 2803236..2804264 | - | 1029 | WP_000522591.1 | major capsid protein | - |
| PIC30_RS13760 () | 2804322..2804669 | - | 348 | WP_000256823.1 | head decoration protein | - |
| PIC30_RS13765 () | 2804706..2806211 | - | 1506 | WP_001253963.1 | S49 family peptidase | - |
| PIC30_RS13770 () | 2806201..2807793 | - | 1593 | WP_000831818.1 | phage portal protein | - |
| PIC30_RS13775 () | 2807790..2807996 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| PIC30_RS13780 () | 2807980..2809908 | - | 1929 | WP_000622378.1 | phage terminase large subunit family protein | - |
| PIC30_RS13785 () | 2809880..2810428 | - | 549 | WP_000867574.1 | terminase small subunit | - |
| PIC30_RS13790 () | 2810815..2811048 | + | 234 | WP_001331705.1 | YlcI/YnfO family protein | - |
| PIC30_RS13795 () | 2811106..2811516 | + | 411 | WP_000057035.1 | DUF1398 family protein | - |
| PIC30_RS13800 () | 2811824..2812288 | - | 465 | WP_001082537.1 | lysis protein | - |
| PIC30_RS13805 () | 2812587..2813120 | - | 534 | WP_000992052.1 | lysozyme | - |
| PIC30_RS13810 () | 2813226..2813498 | + | 273 | WP_001351274.1 | hypothetical protein | - |
| PIC30_RS13815 () | 2813464..2813808 | - | 345 | WP_000193259.1 | YdfR family protein | - |
| PIC30_RS13820 () | 2813813..2814028 | - | 216 | WP_000372595.1 | class II holin family protein | - |
| PIC30_RS13825 () | 2814178..2814318 | - | 141 | Protein_2712 | hypothetical protein | - |
| PIC30_RS13830 () | 2814315..2814524 | - | 210 | Protein_2713 | DUF1737 domain-containing protein | - |
| PIC30_RS13835 () | 2815280..2815396 | + | 117 | Protein_2714 | hypothetical protein | - |
| PIC30_RS13855 () | 2815799..2816848 | - | 1050 | WP_000935515.1 | site-specific DNA-methyltransferase | - |
| PIC30_RS13860 () | 2816999..2817196 | - | 198 | WP_000917749.1 | hypothetical protein | - |
| PIC30_RS13865 () | 2817421..2818242 | - | 822 | WP_000762880.1 | antitermination protein | - |
| PIC30_RS13870 () | 2818239..2818613 | - | 375 | WP_000904114.1 | RusA family crossover junction endodeoxyribonuclease | - |
| PIC30_RS13875 () | 2818626..2819672 | - | 1047 | WP_001265108.1 | DUF968 domain-containing protein | - |
| PIC30_RS13880 () | 2819674..2819952 | - | 279 | WP_011478175.1 | hypothetical protein | - |
| PIC30_RS13885 () | 2820120..2820275 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 2820287..2820345 | + | 59 | - | - | Antitoxin Detail |
| PIC30_RS13890 () | 2820893..2821894 | - | 1002 | WP_000354966.1 | hypothetical protein | - |
| PIC30_RS13895 () | 2821910..2822872 | - | 963 | WP_014639476.1 | hypothetical protein | - |
| PIC30_RS13900 () | 2823064..2823486 | - | 423 | WP_001151216.1 | DUF977 family protein | - |
| PIC30_RS13905 () | 2823527..2824597 | - | 1071 | WP_001262357.1 | hypothetical protein | - |
| PIC30_RS13910 () | 2824669..2825094 | - | 426 | WP_000693867.1 | toxin YdaT family protein | - |
| PIC30_RS13915 () | 2825078..2825320 | - | 243 | WP_000747951.1 | Cro/CI family transcriptional regulator | - |
| PIC30_RS13920 () | 2825712..2826050 | + | 339 | WP_001362937.1 | S24 family peptidase | - |
| PIC30_RS13925 () | 2826343..2826498 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| PIC30_RS13930 () | 2826500..2826628 | + | 129 | WP_000344964.1 | protein YdfB | - |
| PIC30_RS13935 () | 2826658..2826879 | + | 222 | WP_001171970.1 | protein YdfC | - |
| PIC30_RS13940 () | 2827445..2827633 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| PIC30_RS13945 () | 2827630..2827821 | + | 192 | WP_001090203.1 | DUF1482 family protein | - |
| PIC30_RS13950 () | 2827914..2830385 | + | 2472 | WP_000048435.1 | exonuclease | - |
| PIC30_RS13955 () | 2830450..2830698 | + | 249 | WP_000113189.1 | excisionase | - |
| PIC30_RS13960 () | 2830676..2831806 | + | 1131 | WP_000113674.1 | hypothetical protein ; Integrase | Integrase |
| PIC30_RS13965 () | 2831852..2832490 | - | 639 | WP_001350853.1 | outer membrane protein OmpW | - |
| PIC30_RS13970 () | 2832729..2832818 | + | 90 | Protein_2738 | YkgJ family cysteine cluster protein | - |
| PIC30_RS13975 () | 2832846..2833589 | + | 744 | WP_000028546.1 | YciC family protein | - |
| PIC30_RS13980 () | 2833619..2834158 | + | 540 | WP_000808672.1 | septation protein A | - |
| PIC30_RS13985 () | 2834264..2834662 | + | 399 | WP_000108160.1 | acyl-CoA thioester hydrolase YciA | - |
| PIC30_RS13990 () | 2834702..2835418 | - | 717 | WP_001357407.1 | TonB system transport protein TonB | - |
| PIC30_RS13995 () | 2835642..2835938 | + | 297 | WP_000967595.1 | YciI family protein | - |
| PIC30_RS14000 () | 2836238..2837491 | + | 1254 | WP_001313775.1 | voltage-gated potassium channel protein | - |
| PIC30_RS14005 () | 2837546..2837719 | - | 174 | WP_001309467.1 | YciY family protein | - |
| PIC30_RS14010 () | 2837862..2839322 | + | 1461 | WP_000214516.1 | cardiolipin synthase | - |
| PIC30_RS14015 () | 2839357..2839686 | + | 330 | WP_000366957.1 | HI1450 family dsDNA-mimic protein | - |
| PIC30_RS14020 () | 2839739..2840743 | - | 1005 | WP_000994894.1 | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|