MGE detailed information
MGE type: Genomic_island MGE length: 41857 bp
Accession: NZ_CP116067 Location: 4132661..4174517 Organism: Escherichia coli strain DETEC-S792 Replicon: chromosome
Accession: NZ_CP116067 Location: 4132661..4174517 Organism: Escherichia coli strain DETEC-S792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PID00_RS20430 (4129158) | 4129158..4130285 | - | 1128 | WP_000006268.1 | DGQHR domain-containing protein DpdB | - |
| PID00_RS20435 (4130282) | 4130282..4131532 | - | 1251 | WP_000040318.1 | tRNA-guanine transglycosylase DpdA | - |
| PID00_RS20440 (4131606) | 4131606..4132562 | - | 957 | WP_001598204.1 | hypothetical protein | - |
| PID00_RS20445 (4133249) | 4133249..4133466 | + | 218 | Protein_3992 | hypothetical protein | VF |
| PID00_RS20450 (4133661) | 4133661..4134682 | - | 1022 | Protein_3993 | IS110 family transposase | - |
| PID00_RS20455 (4134762) | 4134762..4135298 | + | 537 | Protein_3994 | hypothetical protein | VF |
| PID00_RS20460 (4136422) | 4136422..4137246 | - | 825 | WP_001114711.1 | MurR/RpiR family transcriptional regulator | - |
| PID00_RS20465 (4137412) | 4137412..4138968 | + | 1557 | WP_001351184.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| PID00_RS20470 (4138968) | 4138968..4139657 | + | 690 | WP_001261214.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| PID00_RS20475 (4139835) | 4139835..4140129 | + | 295 | Protein_3998 | hypothetical protein | - |
| PID00_RS20480 (4140719) | 4140719..4141202 | + | 484 | Protein_3999 | IS630 family transposase | - |
| PID00_RS20485 (4141221) | 4141221..4141781 | - | 561 | Protein_4000 | IS110 family transposase ISEc21 | Transposase |
| PID00_RS20490 (4141909) | 4141909..4142940 | - | 1032 | WP_261577207.1 | LacI family DNA-binding transcriptional regulator | - |
| PID00_RS20495 (4143211) | 4143211..4143654 | + | 444 | WP_000916813.1 | PTS sugar transporter subunit IIA | - |
| PID00_RS20500 (4143670) | 4143670..4143957 | + | 288 | WP_000705927.1 | PTS sugar transporter subunit IIB | - |
| PID00_RS20505 (4143970) | 4143970..4145226 | + | 1257 | WP_000345352.1 | PTS ascorbate transporter subunit IIC | - |
| PID00_RS20510 (4145473) | 4145473..4145727 | - | 255 | WP_001327567.1 | IS66 family transposase IS682 | Transposase |
| PID00_RS20515 (4146149) | 4146149..4147162 | - | 1014 | WP_000107474.1 | aldose 1-epimerase family protein | - |
| PID00_RS20520 (4147174) | 4147174..4148491 | - | 1318 | Protein_4007 | L-fucose-proton symporter | VF |
| PID00_RS20525 (4148519) | 4148519..4149439 | - | 921 | WP_000350265.1 | ribokinase | - |
| PID00_RS20530 (4149743) | 4149743..4150525 | + | 783 | WP_001305338.1 | DeoR family transcriptional regulator | - |
| PID00_RS20535 (4150527) | 4150527..4150753 | - | 227 | Protein_4010 | acetolactate synthase small subunit | - |
| PID00_RS20540 (4151821) | 4151821..4152255 | - | 435 | WP_001221626.1 | zinc-ribbon domain-containing protein | - |
| PID00_RS20545 (4152243) | 4152243..4152644 | - | 402 | WP_261577206.1 | zinc-ribbon domain-containing protein | - |
| PID00_RS20550 (4152904) | 4152904..4153473 | - | 570 | WP_000221488.1 | inovirus Gp2 family protein | - |
| PID00_RS20555 (4153673) | 4153673..4153873 | + | 201 | WP_001297900.1 | hypothetical protein | - |
| PID00_RS20560 (4154279) | 4154279..4154428 | - | 150 | WP_071526287.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| PID00_RS20565 (4155188) | 4155188..4155394 | + | 207 | WP_000235219.1 | AlpA family phage regulatory protein | - |
| PID00_RS20570 (4155488) | 4155488..4156090 | + | 603 | WP_000813432.1 | hypothetical protein | - |
| PID00_RS20575 (4157352) | 4157352..4158269 | + | 918 | WP_021561038.1 | hypothetical protein | - |
| PID00_RS20580 (4158354) | 4158354..4159226 | + | 873 | WP_001069740.1 | GTPase family protein | - |
| PID00_RS20585 (4159599) | 4159599..4162445 | + | 2847 | WP_146881478.1 | Ag43/Cah family autotransporter adhesin | - |
| PID00_RS20590 (4162784) | 4162784..4163602 | + | 819 | WP_261577205.1 | DUF932 domain-containing protein | - |
| PID00_RS20595 (4163694) | 4163694..4164179 | + | 486 | WP_000206667.1 | antirestriction protein | - |
| PID00_RS20600 (4164195) | 4164195..4164671 | + | 477 | WP_032198294.1 | RadC family protein | - |
| PID00_RS20605 (4164740) | 4164740..4164961 | + | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| PID00_RS20610 (4165041) | 4165041..4165409 | + | 369 | WP_001598216.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| PID00_RS20615 (4165499) | 4165499..4165873 | + | 375 | WP_271290491.1 | TA system toxin CbtA family protein | Toxin Detail |
| PID00_RS20620 (4165870) | 4165870..4166361 | + | 492 | WP_001598218.1 | DUF5983 family protein | - |
| PID00_RS20625 (4166373) | 4166373..4166570 | + | 198 | WP_024192776.1 | DUF957 domain-containing protein | - |
| PID00_RS20630 (4166655) | 4166655..4166804 | + | 150 | Protein_4029 | hypothetical protein | - |
| PID00_RS20635 (4167563) | 4167563..4167706 | - | 144 | Protein_4030 | HNH endonuclease | - |
| PID00_RS20640 (4167843) | 4167843..4168493 | + | 651 | Protein_4031 | HNH endonuclease | - |
| PID00_RS20645 (4168501) | 4168501..4169481 | - | 981 | WP_096122164.1 | sialate O-acetylesterase | - |
| PID00_RS20650 (4169546) | 4169546..4170652 | - | 1107 | WP_053290673.1 | N-acetylneuraminate epimerase | - |
| PID00_RS20655 (4170672) | 4170672..4171388 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PID00_RS20660 (4172841) | 4172841..4173443 | + | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| PID00_RS20665 (4173921) | 4173921..4174517 | + | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| PID00_RS20670 (4174998) | 4174998..4175552 | + | 555 | WP_001561332.1 | type 1 fimbrial major subunit FimA | - |
| PID00_RS20675 (4175617) | 4175617..4176156 | + | 540 | WP_024196158.1 | fimbrial protein | - |
| PID00_RS20680 (4176193) | 4176193..4176918 | + | 726 | WP_000066573.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|