MGE detailed information
MGE type: Genomic_island MGE length: 24958 bp
Accession: NZ_CP116067 Location: 3877295..3902252 Organism: Escherichia coli strain DETEC-S792 Replicon: chromosome
Accession: NZ_CP116067 Location: 3877295..3902252 Organism: Escherichia coli strain DETEC-S792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PID00_RS19210 (3874143) | 3874143..3874862 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| PID00_RS19215 (3874859) | 3874859..3876490 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| PID00_RS19220 (3876671) | 3876671..3876901 | + | 231 | WP_096122457.1 | 4Fe-4S mono-cluster protein YjdI | - |
| PID00_RS19225 (3876913) | 3876913..3877185 | + | 273 | WP_096122458.1 | GNAT family N-acetyltransferase | - |
| PID00_RS19230 (3877295) | 3877295..3879832 | - | 2538 | WP_096122459.1 | Outer membrane usher protein FimD | VF |
| PID00_RS19235 (3879865) | 3879865..3880557 | - | 693 | WP_096122460.1 | putative fimbrial chaperone YraI | VF |
| PID00_RS19240 (3880622) | 3880622..3881152 | - | 531 | WP_249542487.1 | adhesin | - |
| PID00_RS19245 (3881553) | 3881553..3885365 | + | 3813 | WP_249542488.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| PID00_RS19250 (3886271) | 3886271..3887097 | + | 827 | Protein_3758 | helix-turn-helix transcriptional regulator | - |
| PID00_RS19255 (3888257) | 3888257..3892186 | + | 3930 | WP_096122463.1 | Serine protease EspC | VF |
| PID00_RS19260 (3892400) | 3892400..3892672 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| PID00_RS19265 (3892901) | 3892901..3893197 | + | 297 | WP_001317561.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| PID00_RS19270 (3893225) | 3893225..3893398 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| PID00_RS19275 (3893517) | 3893517..3895034 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| PID00_RS19280 (3895271) | 3895271..3896728 | - | 1458 | WP_104274718.1 | dipeptide/tripeptide permease DtpC | - |
| PID00_RS19285 (3896787) | 3896787..3898934 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| PID00_RS19290 (3899014) | 3899014..3900348 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| PID00_RS19295 (3900714) | 3900714..3902252 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| PID00_RS19300 (3903089) | 3903089..3905320 | - | 2232 | WP_162824400.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|