MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 135288 bp
Accession: NZ_CP116067 Location: 2492357..2627644 Organism: Escherichia coli strain DETEC-S792 Replicon: chromosome
Accession: NZ_CP116067 Location: 2492357..2627644 Organism: Escherichia coli strain DETEC-S792 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PID00_RS12610 (2488178) | 2488178..2490313 | - | 2136 | WP_001562055.1 | ornithine decarboxylase | - |
| PID00_RS12615 (2490476) | 2490476..2490553 | - | 78 | WP_212734103.1 | hypothetical protein | - |
| PID00_RS12620 (2490706) | 2490706..2491413 | + | 708 | WP_096121740.1 | DUF554 domain-containing protein | - |
| PID00_RS12630 (2491792) | 2491792..2493054 | + | 1263 | WP_096121739.1 | integrase arm-type DNA-binding domain-containing protein | - |
| PID00_RS12635 (2493506) | 2493506..2497021 | + | 3516 | WP_042016468.1 | AAA domain-containing protein | - |
| PID00_RS12640 (2497163) | 2497163..2497333 | + | 171 | Protein_2476 | IS3 family transposase | - |
| PID00_RS12645 (2497379) | 2497379..2497726 | + | 348 | Protein_2477 | transposase | - |
| PID00_RS12650 (2497765) | 2497765..2498142 | - | 378 | Protein_2478 | transposase | - |
| PID00_RS12655 (2498127) | 2498127..2499131 | + | 1005 | Protein_2479 | conjugal transfer protein TraF | - |
| PID00_RS12660 (2499492) | 2499492..2503349 | + | 3858 | WP_016232304.1 | Serine protease pet autotransporter | VF |
| PID00_RS12665 (2503396) | 2503396..2503977 | + | 582 | WP_000291751.1 | hypothetical protein | - |
| PID00_RS12670 (2504380) | 2504380..2505330 | - | 951 | Protein_2482 | IS66 family transposase ISCro1 | Transposase |
| PID00_RS12675 (2505381) | 2505381..2505956 | - | 576 | Protein_2483 | ISL3 family transposase ISEc38 | Transposase |
| PID00_RS12680 (2505960) | 2505960..2506360 | + | 401 | Protein_2484 | IS66 family transposase ISCro1 | Transposase |
| PID00_RS12685 (2506588) | 2506588..2507013 | + | 426 | WP_000422749.1 | IS66 family transposase ISEc23 | Transposase |
| PID00_RS12690 (2507010) | 2507010..2507360 | + | 351 | WP_000624723.1 | IS66 family transposase ISEc47 | Transposase |
| PID00_RS12695 (2507391) | 2507391..2509004 | + | 1614 | WP_116835054.1 | IS66 family transposase ISEc43 | Transposase |
| PID00_RS12700 (2509151) | 2509151..2509348 | - | 198 | WP_001296384.1 | hypothetical protein | - |
| PID00_RS12705 (2509311) | 2509311..2509391 | + | 81 | WP_071525019.1 | hypothetical protein | - |
| PID00_RS12710 (2509609) | 2509609..2511699 | - | 2091 | WP_001223350.1 | bifunctional siderophore receptor/adhesin Iha | - |
| PID00_RS12715 (2513152) | 2513152..2513367 | + | 216 | Protein_2491 | hypothetical protein | - |
| PID00_RS12720 (2514035) | 2514035..2514371 | + | 337 | Protein_2492 | hypothetical protein | - |
| PID00_RS12725 (2515146) | 2515146..2517341 | - | 2196 | WP_001387241.1 | Ferric aerobactin receptor | VF |
| PID00_RS12730 (2517347) | 2517347..2518684 | - | 1338 | WP_000750131.1 | L-lysine N6-monooxygenase | VF |
| PID00_RS12735 (2518681) | 2518681..2520423 | - | 1743 | WP_271290614.1 | Aerobactin synthase | VF |
| PID00_RS12740 (2520423) | 2520423..2521370 | - | 948 | WP_001287503.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| PID00_RS12745 (2521371) | 2521371..2523095 | - | 1725 | WP_001403387.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| PID00_RS12750 (2523231) | 2523231..2524424 | + | 1194 | WP_000074477.1 | MFS transporter | - |
| PID00_RS12755 (2524582) | 2524582..2525571 | - | 990 | WP_000990138.1 | sialate O-acetylesterase | - |
| PID00_RS12760 (2525668) | 2525668..2526402 | + | 735 | WP_001282578.1 | transcriptional regulator NanR | - |
| PID00_RS12765 (2526438) | 2526438..2527361 | - | 924 | WP_001030725.1 | alpha/beta hydrolase fold domain-containing protein | - |
| PID00_RS12770 (2527423) | 2527423..2528532 | - | 1110 | WP_000865295.1 | N-acetylneuraminate epimerase | - |
| PID00_RS12775 (2528545) | 2528545..2529255 | - | 711 | WP_001296386.1 | oligogalacturonate-specific porin KdgM family protein | - |
| PID00_RS12780 (2529301) | 2529301..2530131 | - | 831 | WP_000948500.1 | alpha/beta hydrolase | - |
| PID00_RS12785 (2530135) | 2530135..2531607 | - | 1473 | WP_000376547.1 | MFS transporter | - |
| PID00_RS12790 (2531656) | 2531656..2532531 | - | 876 | WP_000629094.1 | N-acetylmannosamine kinase | - |
| PID00_RS12795 (2532565) | 2532565..2533482 | - | 918 | WP_001149832.1 | N-acetylneuraminate lyase | - |
| PID00_RS12800 (2533600) | 2533600..2533998 | + | 399 | Protein_2508 | transposase domain-containing protein | - |
| PID00_RS12805 (2534144) | 2534144..2534569 | + | 426 | WP_000435656.1 | IS66 family transposase IS682 | Transposase |
| PID00_RS12810 (2534566) | 2534566..2534916 | + | 351 | WP_000624652.1 | IS66 family transposase IS682 | Transposase |
| PID00_RS12815 (2534947) | 2534947..2536371 | + | 1425 | Protein_2511 | IS66 family transposase IS682 | Transposase |
| PID00_RS12820 (2536625) | 2536625..2537758 | - | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| PID00_RS12825 (2537819) | 2537819..2538007 | + | 189 | Protein_2513 | IS66 family transposase IS682 | Transposase |
| PID00_RS12830 (2538220) | 2538220..2538600 | + | 381 | WP_001466366.1 | IS66 family transposase ISEc8 | Transposase |
| PID00_RS12835 (2538597) | 2538597..2538944 | + | 348 | WP_032218831.1 | IS66 family transposase ISEc8 | Transposase |
| PID00_RS12840 (2538994) | 2538994..2540532 | + | 1539 | WP_016232312.1 | IS66 family transposase ISEc8 | Transposase |
| PID00_RS12845 (2540571) | 2540571..2540756 | - | 186 | Protein_2517 | putative zinc ribbon protein | - |
| PID00_RS12850 (2540753) | 2540753..2541136 | - | 384 | WP_016232313.1 | putative zinc ribbon protein | - |
| PID00_RS12855 (2541303) | 2541303..2541872 | - | 570 | WP_000221523.1 | inovirus Gp2 family protein | - |
| PID00_RS12860 (2542071) | 2542071..2542268 | + | 198 | WP_116835164.1 | hypothetical protein | - |
| PID00_RS12865 (2542601) | 2542601..2542780 | - | 180 | Protein_2521 | hemolysin expression modulator Hha | - |
| PID00_RS12870 (2543075) | 2543075..2544255 | + | 1181 | WP_244449542.1 | IS3 family transposase ISCfr6 | Transposase |
| PID00_RS12875 (2544962) | 2544962..2545168 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| PID00_RS12880 (2545254) | 2545254..2545826 | + | 573 | WP_042014402.1 | hypothetical protein | - |
| PID00_RS12885 (2545947) | 2545947..2547437 | - | 1491 | WP_042014403.1 | YfjI family protein | - |
| PID00_RS12890 (2548769) | 2548769..2549641 | + | 873 | WP_016238810.1 | GTPase family protein | - |
| PID00_RS12895 (2549975) | 2549975..2553097 | + | 3123 | WP_116835163.1 | autotransporter adhesin Ag43 | - |
| PID00_RS12900 (2553276) | 2553276..2553605 | + | 330 | WP_042014874.1 | IS66 family transposase ISEc49 | Transposase |
| PID00_RS12905 (2553592) | 2553592..2553971 | + | 380 | Protein_2529 | IS66 family transposase ISEc49 | Transposase |
| PID00_RS12910 (2553978) | 2553978..2555579 | + | 1602 | WP_087895500.1 | IS66 family transposase ISEc49 | Transposase |
| PID00_RS12915 (2555979) | 2555979..2556242 | + | 264 | Protein_2531 | hypothetical protein | - |
| PID00_RS12920 (2556476) | 2556476..2558010 | + | 1535 | Protein_2532 | IS21 family transposase ISSso4 | Transposase |
| PID00_RS12925 (2558027) | 2558027..2558782 | + | 756 | WP_042100476.1 | IS21 family transposase ISSso4 | Transposase |
| PID00_RS12930 (2558885) | 2558885..2561137 | + | 2253 | Protein_2534 | hypothetical protein | - |
| PID00_RS12935 (2561213) | 2561213..2561668 | + | 456 | WP_000581504.1 | IrmA family protein | - |
| PID00_RS12940 (2561747) | 2561747..2561980 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| PID00_RS12945 (2562080) | 2562080..2562898 | + | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| PID00_RS12950 (2562974) | 2562974..2564545 | - | 1572 | WP_001403908.1 | IS66 family transposase ISCro1 | Transposase |
| PID00_RS12955 (2564565) | 2564565..2564912 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| PID00_RS12960 (2564912) | 2564912..2565589 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| PID00_RS12965 (2565660) | 2565660..2566145 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| PID00_RS12970 (2566161) | 2566161..2566637 | + | 477 | WP_001186726.1 | RadC family protein | - |
| PID00_RS12975 (2566700) | 2566700..2566921 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| PID00_RS12980 (2567084) | 2567084..2567452 | + | 369 | WP_001278232.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| PID00_RS12985 (2567542) | 2567542..2567916 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| PID00_RS12990 (2567913) | 2567913..2568401 | + | 489 | WP_000777547.1 | DUF5983 family protein | - |
| PID00_RS12995 (2568413) | 2568413..2568610 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| PID00_RS13000 (2568707) | 2568707..2569276 | + | 570 | WP_001290247.1 | DUF4942 domain-containing protein | - |
| PID00_RS13005 (2569556) | 2569556..2570092 | - | 537 | WP_116835114.1 | Type II secretion system protein M | VF |
| PID00_RS13010 (2570094) | 2570094..2571272 | - | 1179 | WP_116835115.1 | hypothetical protein | VF |
| PID00_RS13015 (2571269) | 2571269..2572246 | - | 978 | WP_000633196.1 | Putative type II secretion system protein K | VF |
| PID00_RS13020 (2572243) | 2572243..2572848 | - | 606 | WP_001318033.1 | Type II secretion system protein J | VF |
| PID00_RS13025 (2572845) | 2572845..2573216 | - | 372 | WP_000820091.1 | hypothetical protein | VF |
| PID00_RS13030 (2573213) | 2573213..2573776 | - | 564 | WP_001115149.1 | Type II secretion system protein H | VF |
| PID00_RS13035 (2573780) | 2573780..2574235 | - | 456 | WP_001087296.1 | Type II secretion system protein G | VF |
| PID00_RS13040 (2574252) | 2574252..2575475 | - | 1224 | WP_001173415.1 | Type II secretion system protein F | VF |
| PID00_RS13045 (2575475) | 2575475..2576968 | - | 1494 | WP_000249319.1 | Type II secretion system protein E | VF |
| PID00_RS13050 (2576968) | 2576968..2579028 | - | 2061 | WP_001318034.1 | Secretin GspD 2 | VF |
| PID00_RS13055 (2579058) | 2579058..2580017 | - | 960 | WP_089695484.1 | Type II secretion system protein C 2 | VF |
| PID00_RS13060 (2580035) | 2580035..2580445 | - | 411 | WP_001298257.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| PID00_RS13065 (2580511) | 2580511..2581320 | - | 810 | WP_000895875.1 | Prepilin peptidase PppA | VF |
| PID00_RS13070 (2581476) | 2581476..2586047 | - | 4572 | WP_116835116.1 | hypothetical protein | VF |
| PID00_RS13075 (2586530) | 2586530..2588212 | - | 1683 | WP_000259280.1 | glycolate permease GlcA | - |
| PID00_RS13080 (2588568) | 2588568..2590739 | - | 2172 | WP_116835117.1 | malate synthase G | - |
| PID00_RS13085 (2590761) | 2590761..2591165 | - | 405 | WP_000853256.1 | GlcG family protein | - |
| PID00_RS13090 (2591170) | 2591170..2592393 | - | 1224 | WP_032285039.1 | glycolate oxidase subunit GlcF | - |
| PID00_RS13095 (2592404) | 2592404..2593456 | - | 1053 | WP_001562103.1 | glycolate oxidase subunit GlcE | - |
| PID00_RS13100 (2593456) | 2593456..2594955 | - | 1500 | WP_103756806.1 | glycolate oxidase subunit GlcD | - |
| PID00_RS13105 (2595206) | 2595206..2595970 | + | 765 | WP_001314155.1 | transcriptional regulator GlcC | - |
| PID00_RS13110 (2595977) | 2595977..2597119 | - | 1143 | WP_001562104.1 | protein YghO | - |
| PID00_RS13115 (2597491) | 2597491..2599215 | + | 1725 | WP_153734549.1 | Long-chain-fatty-acid--AMP ligase FadD26 | VF |
| PID00_RS13120 (2599212) | 2599212..2600126 | + | 915 | WP_001077117.1 | NAD-dependent epimerase/dehydratase family protein | - |
| PID00_RS13125 (2600158) | 2600158..2600406 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| PID00_RS13130 (2600406) | 2600406..2601578 | + | 1173 | WP_053290549.1 | 8-amino-7-oxononanoate synthase | VF |
| PID00_RS13135 (2601613) | 2601613..2602692 | - | 1080 | WP_001318039.1 | LPS export ABC transporter permease LptG | - |
| PID00_RS13140 (2602689) | 2602689..2603759 | - | 1071 | WP_000779645.1 | LPS export ABC transporter permease LptF | - |
| PID00_RS13145 (2603789) | 2603789..2604349 | - | 561 | WP_000098711.1 | YtfJ family protein | - |
| PID00_RS13150 (2604361) | 2604361..2605185 | - | 825 | WP_000984989.1 | hypothetical protein | - |
| PID00_RS13155 (2605185) | 2605185..2606534 | - | 1350 | WP_000896872.1 | lipopolysaccharide biosynthesis protein | - |
| PID00_RS13160 (2606580) | 2606580..2607338 | - | 759 | WP_000339529.1 | hypothetical protein | - |
| PID00_RS13165 (2607370) | 2607370..2608083 | - | 714 | WP_001076267.1 | dTMP kinase | - |
| PID00_RS13170 (2608258) | 2608258..2608950 | + | 693 | WP_053290548.1 | dTMP kinase | - |
| PID00_RS13175 (2608999) | 2608999..2610498 | - | 1500 | WP_000933274.1 | inorganic phosphate transporter PitB | - |
| PID00_RS13180 (2610794) | 2610794..2612653 | - | 1860 | WP_001309761.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| PID00_RS13185 (2612858) | 2612858..2613724 | + | 867 | WP_001357668.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| PID00_RS13190 (2613847) | 2613847..2614095 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| PID00_RS13195 (2614108) | 2614108..2614449 | - | 342 | WP_000544952.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| PID00_RS13200 (2614442) | 2614442..2614930 | - | 489 | WP_000134017.1 | hydrogenase-2 assembly chaperone | - |
| PID00_RS13205 (2614923) | 2614923..2615417 | - | 495 | WP_001221940.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| PID00_RS13210 (2615417) | 2615417..2617120 | - | 1704 | WP_000083065.1 | hydrogenase 2 large subunit | - |
| PID00_RS13215 (2617117) | 2617117..2618295 | - | 1179 | WP_000017701.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| PID00_RS13220 (2618285) | 2618285..2619271 | - | 987 | WP_001081860.1 | hydrogenase 2 operon protein HybA | - |
| PID00_RS13225 (2619274) | 2619274..2620392 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| PID00_RS13230 (2620581) | 2620581..2620868 | - | 288 | WP_001059139.1 | DUF2623 family protein YghW | - |
| PID00_RS13235 (2620987) | 2620987..2621874 | - | 888 | WP_001318043.1 | YghX family hydrolase | - |
| PID00_RS13240 (2622031) | 2622031..2623071 | + | 1041 | WP_000262143.1 | L-glyceraldehyde 3-phosphate reductase | - |
| PID00_RS13245 (2623111) | 2623111..2623605 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| PID00_RS13250 (2623796) | 2623796..2624680 | + | 885 | WP_001562110.1 | putative oxidoreductase YghA | VF |
| PID00_RS13255 (2624719) | 2624719..2625144 | - | 426 | WP_001240712.1 | TonB system transport protein ExbD | - |
| PID00_RS13260 (2625151) | 2625151..2625885 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| PID00_RS13265 (2626137) | 2626137..2627324 | + | 1188 | WP_096122344.1 | cystathionine beta-lyase | - |
| PID00_RS13270 (2627464) | 2627464..2628123 | + | 660 | WP_000268419.1 | DedA family general envelope maintenance protein YghB | - |
| PID00_RS13275 (2628163) | 2628163..2629062 | - | 900 | WP_140432514.1 | DNA-binding transcriptional regulator YqhC | - |
| PID00_RS13280 (2629256) | 2629256..2630419 | + | 1164 | WP_001058802.1 | alcohol dehydrogenase | - |
| PID00_RS13285 (2630524) | 2630524..2631351 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| PID00_RS13290 (2631551) | 2631551..2632477 | + | 927 | WP_096122346.1 | YbjP/YqhG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|