MGE detailed information
MGE type: Genomic_island MGE length: 11790 bp
Accession: NZ_CP116044 Location: 4347672..4359461 Organism: Escherichia coli strain STEC1575 Replicon: chromosome
Accession: NZ_CP116044 Location: 4347672..4359461 Organism: Escherichia coli strain STEC1575 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PHA55_RS21155 (4343997) | 4343997..4345205 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| PHA55_RS21160 (4345231) | 4345231..4346562 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| PHA55_RS21165 (4346584) | 4346584..4347573 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| PHA55_RS21170 (4347672) | 4347672..4348610 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| PHA55_RS21175 (4348925) | 4348925..4349143 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| PHA55_RS21180 (4349399) | 4349399..4349938 | + | 540 | WP_000675746.1 | protein YhaB | - |
| PHA55_RS21185 (4349960) | 4349960..4351149 | + | 1190 | Protein_4126 | YhaC family protein | - |
| PHA55_RS21195 (4352285) | 4352285..4353430 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| PHA55_RS21200 (4353527) | 4353527..4354417 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| PHA55_RS21205 (4354447) | 4354447..4355217 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| PHA55_RS21210 (4355233) | 4355233..4356567 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| PHA55_RS21215 (4356942) | 4356942..4358513 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| PHA55_RS21220 (4358662) | 4358662..4358997 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| PHA55_RS21225 (4358997) | 4358997..4359461 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| PHA55_RS21230 (4359516) | 4359516..4360325 | - | 810 | WP_000072180.1 | aga operon transcriptional regulator AgaR | - |
| PHA55_RS21235 (4360574) | 4360574..4361854 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| PHA55_RS21240 (4361877) | 4361877..4362350 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| PHA55_RS21245 (4362361) | 4362361..4363140 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| PHA55_RS21250 (4363130) | 4363130..4364008 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| PHA55_RS21255 (4364026) | 4364026..4364460 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|