MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP116035 Location: 4225848..4245100 Organism: Escherichia coli strain FAH Replicon: chromosome
Accession: NZ_CP116035 Location: 4225848..4245100 Organism: Escherichia coli strain FAH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGH49_RS20895 (4221327) | 4221327..4221830 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| PGH49_RS20900 (4221843) | 4221843..4222373 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| PGH49_RS20905 (4222383) | 4222383..4225019 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| PGH49_RS20910 (4225086) | 4225086..4225811 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| PGH49_RS20915 (4225848) | 4225848..4226387 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| PGH49_RS20920 (4226452) | 4226452..4227000 | - | 549 | WP_001774144.1 | Type-1 fimbrial protein, A chain | VF |
| PGH49_RS20925 (4227482) | 4227482..4228078 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| PGH49_RS20930 (4228556) | 4228556..4229158 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| PGH49_RS20935 (4230614) | 4230614..4231330 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| PGH49_RS20940 (4231350) | 4231350..4232456 | + | 1107 | WP_001774143.1 | N-acetylneuraminate epimerase | - |
| PGH49_RS20945 (4232521) | 4232521..4233501 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| PGH49_RS20950 (4233611) | 4233611..4233816 | + | 206 | Protein_4100 | HNH endonuclease | - |
| PGH49_RS20955 (4234084) | 4234084..4235324 | - | 1241 | Protein_4101 | helicase YjhR | - |
| PGH49_RS20960 (4235440) | 4235440..4235571 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| PGH49_RS20965 (4236062) | 4236062..4236319 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| PGH49_RS20970 (4236331) | 4236331..4236876 | + | 546 | WP_001540600.1 | N-acetyltransferase | Antitoxin Detail |
| PGH49_RS20975 (4236932) | 4236932..4237678 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| PGH49_RS20980 (4237847) | 4237847..4238065 | + | 219 | Protein_4106 | hypothetical protein | - |
| PGH49_RS20985 (4238103) | 4238103..4238219 | + | 117 | Protein_4107 | VOC family protein | - |
| PGH49_RS20990 (4238464) | 4238464..4239585 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| PGH49_RS20995 (4239582) | 4239582..4239860 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| PGH49_RS21000 (4239872) | 4239872..4241185 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| PGH49_RS21005 (4241198) | 4241198..4242004 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| PGH49_RS21010 (4242135) | 4242135..4242566 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| PGH49_RS21015 (4242578) | 4242578..4243210 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| PGH49_RS21020 (4243227) | 4243227..4244009 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| PGH49_RS21025 (4244312) | 4244312..4245100 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| PGH49_RS21030 (4245105) | 4245105..4246010 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| PGH49_RS21035 (4246021) | 4246021..4247988 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| PGH49_RS21040 (4248095) | 4248095..4249444 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|