MGE detailed information
MGE type: Genomic_island MGE length: 16025 bp
Accession: NZ_CP116035 Location: 4183193..4199217 Organism: Escherichia coli strain FAH Replicon: chromosome
Accession: NZ_CP116035 Location: 4183193..4199217 Organism: Escherichia coli strain FAH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGH49_RS20700 (4178613) | 4178613..4179635 | - | 1023 | WP_000106007.1 | zinc-binding alcohol dehydrogenase family protein | - |
| PGH49_RS20705 (4179774) | 4179774..4180679 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| PGH49_RS20710 (4180850) | 4180850..4182502 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| PGH49_RS20715 (4183193) | 4183193..4184164 | + | 972 | WP_001774149.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| PGH49_RS20720 (4184228) | 4184228..4184701 | + | 474 | WP_001235681.1 | TRAP transporter small permease | - |
| PGH49_RS20725 (4184698) | 4184698..4185969 | + | 1272 | WP_000118640.1 | TRAP transporter large permease | - |
| PGH49_RS20730 (4186012) | 4186012..4187676 | - | 1665 | WP_001774148.1 | Methyl-accepting chemotaxis protein I | VF |
| PGH49_RS20735 (4188053) | 4188053..4190203 | + | 2151 | WP_001314407.1 | pyruvate/proton symporter BtsT | - |
| PGH49_RS20740 (4190321) | 4190321..4190524 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| PGH49_RS20745 (4190535) | 4190535..4191491 | + | 957 | WP_001297640.1 | GTPase | - |
| PGH49_RS20750 (4191577) | 4191577..4191768 | - | 192 | WP_001513538.1 | hypothetical protein | - |
| PGH49_RS20755 (4191809) | 4191809..4192777 | - | 969 | WP_001513537.1 | hypothetical protein | - |
| PGH49_RS20760 (4192918) | 4192918..4195350 | + | 2433 | WP_001513536.1 | DEAD/DEAH box helicase family protein | - |
| PGH49_RS20765 (4195417) | 4195417..4196886 | + | 1470 | WP_001387312.1 | type I restriction-modification system subunit M | - |
| PGH49_RS20770 (4196886) | 4196886..4198655 | + | 1770 | WP_001513535.1 | restriction endonuclease subunit S | - |
| - (4198805) | 4198805..4198881 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4198805) | 4198805..4198881 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4198805) | 4198805..4198881 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4198805) | 4198805..4198881 | - | 77 | NuclAT_8 | - | Antitoxin Detail |
| - (4198805) | 4198805..4198881 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4198805) | 4198805..4198881 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4198805) | 4198805..4198881 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| - (4198805) | 4198805..4198881 | - | 77 | NuclAT_9 | - | Antitoxin Detail |
| PGH49_RS20775 (4198876) | 4198876..4199217 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| PGH49_RS20780 (4199264) | 4199264..4200427 | - | 1164 | WP_224153787.1 | DUF1524 domain-containing protein | - |
| PGH49_RS20785 (4200481) | 4200481..4201357 | - | 877 | Protein_4067 | DUF262 domain-containing protein | - |
| PGH49_RS20790 (4201763) | 4201763..4202683 | - | 921 | WP_001513532.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| PGH49_RS20795 (4202868) | 4202868..4204148 | + | 1281 | WP_001338077.1 | DUF445 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|