MGE detailed information
MGE type: Prophage MGE length: 61471 bp
Accession: NZ_CP116004 Location: 1676447..1737917 Organism: Edwardsiella piscicida strain CC2 Replicon: chromosome
Accession: NZ_CP116004 Location: 1676447..1737917 Organism: Edwardsiella piscicida strain CC2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PED70_RS07630 (PED70_07630) | 1671972..1672244 | + | 273 | WP_015461416.1 | hypothetical protein | - |
| PED70_RS07635 (PED70_07635) | 1672605..1673819 | - | 1215 | WP_071818553.1 | DUF1028 domain-containing protein | - |
| PED70_RS07640 (PED70_07640) | 1674880..1675176 | - | 297 | WP_012848441.1 | putative quinol monooxygenase | - |
| PED70_RS07645 (PED70_07645) | 1675218..1675613 | - | 396 | WP_015461418.1 | VOC family protein | - |
| PED70_RS07650 (PED70_07650) | 1675834..1676115 | - | 282 | WP_015461419.1 | ribbon-helix-helix domain-containing protein | - |
| PED70_RS07655 (PED70_07655) | 1676447..1676857 | - | 411 | WP_071818515.1 | tyrosine-type recombinase/integrase | - |
| PED70_RS07660 (PED70_07660) | 1677126..1677296 | - | 171 | Protein_1461 | tyrosine-type recombinase/integrase | - |
| PED70_RS07665 (PED70_07665) | 1677577..1677978 | - | 402 | WP_240733388.1 | tail fiber assembly protein | - |
| PED70_RS07670 (PED70_07670) | 1677993..1678760 | - | 768 | WP_205745120.1 | hypothetical protein | - |
| PED70_RS07675 (PED70_07675) | 1678772..1679350 | - | 579 | WP_129986256.1 | DUF2313 domain-containing protein | - |
| PED70_RS07680 (PED70_07680) | 1679335..1680411 | - | 1077 | WP_280977379.1 | baseplate J/gp47 family protein | - |
| PED70_RS07685 (PED70_07685) | 1680401..1680853 | - | 453 | WP_129986252.1 | phage GP46 family protein | - |
| PED70_RS07690 (PED70_07690) | 1680850..1681392 | - | 543 | WP_129986250.1 | phage baseplate assembly protein V | - |
| PED70_RS07695 (PED70_07695) | 1681383..1682480 | - | 1098 | WP_129986248.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| PED70_RS07700 (PED70_07700) | 1682480..1683748 | - | 1269 | WP_129986246.1 | DNA circularization N-terminal domain-containing protein | - |
| PED70_RS07705 (PED70_07705) | 1683748..1685517 | - | 1770 | WP_129986244.1 | phage tail tape measure protein | - |
| PED70_RS07710 (PED70_07710) | 1685616..1685999 | - | 384 | WP_129986242.1 | phage tail assembly protein | - |
| PED70_RS07715 (PED70_07715) | 1686003..1686359 | - | 357 | WP_035606028.1 | phage tail tube protein | - |
| PED70_RS07720 (PED70_07720) | 1686369..1687847 | - | 1479 | WP_129986240.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| PED70_RS07725 (PED70_07725) | 1687850..1688059 | - | 210 | WP_129986238.1 | DUF2635 domain-containing protein | - |
| PED70_RS07730 (PED70_07730) | 1688056..1688658 | - | 603 | WP_129986236.1 | hypothetical protein | - |
| PED70_RS07735 (PED70_07735) | 1688655..1689197 | - | 543 | WP_129986234.1 | phage virion morphogenesis protein | - |
| PED70_RS07740 (PED70_07740) | 1689197..1689637 | - | 441 | WP_129986232.1 | DUF1320 domain-containing protein | - |
| PED70_RS07745 (PED70_07745) | 1689637..1690014 | - | 378 | WP_129986230.1 | hypothetical protein | - |
| PED70_RS07750 (PED70_07750) | 1690090..1690986 | - | 897 | WP_129986228.1 | Mu-like prophage major head subunit gpT family protein | - |
| PED70_RS07755 (PED70_07755) | 1690986..1691954 | - | 969 | WP_129986226.1 | phage protease | - |
| PED70_RS07760 (PED70_07760) | 1692165..1693004 | - | 840 | WP_129986224.1 | phage minor head protein | - |
| PED70_RS07765 (PED70_07765) | 1692997..1694571 | - | 1575 | WP_129986222.1 | DUF935 domain-containing protein | - |
| PED70_RS07770 (PED70_07770) | 1694571..1696163 | - | 1593 | WP_129986220.1 | terminase family protein | - |
| PED70_RS07775 (PED70_07775) | 1696160..1696741 | - | 582 | WP_129986218.1 | DUF3486 family protein | - |
| PED70_RS07780 (PED70_07780) | 1696731..1697006 | - | 276 | WP_129986216.1 | hypothetical protein | - |
| PED70_RS07785 (PED70_07785) | 1697009..1697296 | - | 288 | WP_129986214.1 | ArsR family transcriptional regulator | - |
| PED70_RS07790 (PED70_07790) | 1697308..1697610 | - | 303 | WP_129986212.1 | DUF2730 domain-containing protein | - |
| PED70_RS07795 (PED70_07795) | 1697591..1697821 | - | 231 | WP_129986210.1 | TraR/DksA family transcriptional regulator | - |
| PED70_RS07800 (PED70_07800) | 1697818..1698423 | - | 606 | WP_129986208.1 | hypothetical protein | - |
| PED70_RS07805 (PED70_07805) | 1698411..1698821 | - | 411 | WP_129986206.1 | hypothetical protein | - |
| PED70_RS07810 (PED70_07810) | 1698897..1699478 | - | 582 | WP_129986204.1 | glycosyl hydrolase 108 family protein | - |
| PED70_RS07815 (PED70_07815) | 1699576..1700076 | - | 501 | WP_129986202.1 | hypothetical protein | - |
| PED70_RS07820 (PED70_07820) | 1700088..1700474 | - | 387 | WP_129986200.1 | Mor transcription activator family protein | - |
| PED70_RS07825 (PED70_07825) | 1700471..1701019 | - | 549 | WP_129986198.1 | regulatory protein GemA | - |
| PED70_RS07830 (PED70_07830) | 1701009..1701509 | - | 501 | WP_205745119.1 | hypothetical protein | - |
| PED70_RS07835 (PED70_07835) | 1701592..1702116 | - | 525 | WP_129986196.1 | host-nuclease inhibitor Gam family protein | - |
| PED70_RS07840 (PED70_07840) | 1702128..1702364 | - | 237 | WP_116603314.1 | hypothetical protein | - |
| PED70_RS07845 (PED70_07845) | 1702376..1702615 | - | 240 | WP_116603315.1 | hypothetical protein | - |
| PED70_RS07850 (PED70_07850) | 1702612..1703562 | - | 951 | WP_116603316.1 | AAA family ATPase | - |
| PED70_RS07855 (PED70_07855) | 1703630..1705621 | - | 1992 | WP_129986194.1 | hypothetical protein ; Integrase | Integrase |
| PED70_RS07860 (PED70_07860) | 1705614..1705859 | - | 246 | WP_116603318.1 | helix-turn-helix domain-containing protein | - |
| PED70_RS07865 (PED70_07865) | 1706043..1706531 | + | 489 | WP_129986192.1 | helix-turn-helix transcriptional regulator | - |
| PED70_RS07870 (PED70_07870) | 1706856..1707188 | + | 333 | WP_280977417.1 | phage holin, lambda family | - |
| PED70_RS07875 (PED70_07875) | 1707191..1707742 | + | 552 | WP_129986147.1 | putative peptidoglycan-binding domain-containing protein | - |
| PED70_RS07880 (PED70_07880) | 1707923..1708705 | + | 783 | WP_240733399.1 | antA/AntB antirepressor family protein | - |
| PED70_RS07885 (PED70_07885) | 1708808..1709353 | + | 546 | WP_129986143.1 | DUF2514 family protein | - |
| PED70_RS07890 (PED70_07890) | 1709710..1710486 | + | 777 | WP_073382315.1 | hypothetical protein | - |
| PED70_RS07895 (PED70_07895) | 1710479..1712140 | + | 1662 | WP_165362063.1 | terminase | - |
| PED70_RS07900 (PED70_07900) | 1712137..1714251 | + | 2115 | WP_129986139.1 | portal protein | - |
| PED70_RS07905 (PED70_07905) | 1714324..1714605 | - | 282 | WP_069578568.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PED70_RS07910 (PED70_07910) | 1714595..1714846 | - | 252 | WP_069578569.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PED70_RS07915 (PED70_07915) | 1715124..1716125 | + | 1002 | WP_129986135.1 | hypothetical protein | - |
| PED70_RS07920 (PED70_07920) | 1716143..1717381 | + | 1239 | WP_280977425.1 | N4-gp56 family major capsid protein | - |
| PED70_RS07925 (PED70_07925) | 1717440..1717835 | + | 396 | WP_080783446.1 | hypothetical protein | - |
| PED70_RS07930 (PED70_07930) | 1717877..1718320 | + | 444 | WP_080783445.1 | hypothetical protein | - |
| PED70_RS07935 (PED70_07935) | 1718386..1718901 | + | 516 | WP_236721582.1 | hypothetical protein | - |
| PED70_RS07940 (PED70_07940) | 1718901..1719563 | + | 663 | WP_109579934.1 | hypothetical protein | - |
| PED70_RS07945 (PED70_07945) | 1719560..1721656 | + | 2097 | WP_280977432.1 | tail fiber protein | - |
| PED70_RS07950 (PED70_07950) | 1721733..1723361 | + | 1629 | WP_280977434.1 | hypothetical protein | - |
| PED70_RS07955 (PED70_07955) | 1723405..1724946 | + | 1542 | WP_129986125.1 | DUF1983 domain-containing protein | - |
| PED70_RS07960 (PED70_07960) | 1724943..1725314 | + | 372 | WP_069578582.1 | hypothetical protein | - |
| PED70_RS07965 (PED70_07965) | 1725322..1725900 | + | 579 | WP_240733386.1 | hypothetical protein | - |
| PED70_RS07970 (PED70_07970) | 1725928..1726308 | + | 381 | WP_069578585.1 | hypothetical protein | - |
| PED70_RS07975 (PED70_07975) | 1726308..1726568 | + | 261 | WP_280977439.1 | bacteriocin | - |
| PED70_RS07980 (PED70_07980) | 1726592..1728019 | + | 1428 | WP_280977441.1 | cytokinesis protein SepA | - |
| PED70_RS07985 (PED70_07985) | 1728106..1735713 | + | 7608 | WP_280977443.1 | LPD5 domain-containing protein | - |
| - | 1735788..1735898 | - | 111 | - | - | Antitoxin Detail |
| - | 1735795..1735896 | + | 102 | - | - | Toxin Detail |
| PED70_RS07990 (PED70_07990) | 1736150..1736305 | - | 156 | WP_280977445.1 | hypothetical protein | - |
| PED70_RS07995 (PED70_07995) | 1736913..1737470 | + | 558 | WP_012848483.1 | Outer membrane protein X | VF |
| PED70_RS08000 (PED70_08000) | 1737558..1737917 | + | 360 | WP_012848484.1 | YcgJ family protein | - |
| PED70_RS08005 (PED70_08005) | 1738159..1738749 | - | 591 | WP_071818517.1 | hypothetical protein | - |
| PED70_RS08010 (PED70_08010) | 1738822..1739295 | - | 474 | WP_012848486.1 | NifB/NifX family molybdenum-iron cluster-binding protein | - |
| PED70_RS08015 (PED70_08015) | 1739306..1739584 | - | 279 | WP_015461422.1 | DUF134 domain-containing protein | - |
| PED70_RS08020 (PED70_08020) | 1739642..1740265 | - | 624 | WP_012848489.1 | response regulator | - |
| PED70_RS08025 (PED70_08025) | 1740262..1742034 | - | 1773 | WP_012848490.1 | sensor histidine kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|