MGE detailed information
MGE type: Prophage MGE length: 49767 bp
Accession: NZ_CP115955 Location: 3527474..3577240 Organism: Ralstonia pseudosolanacearum strain RUN2340 Replicon: chromosome
Accession: NZ_CP115955 Location: 3527474..3577240 Organism: Ralstonia pseudosolanacearum strain RUN2340 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PG907_RS16625 | 3522868..3524148 | + | 1281 | WP_247362484.1 | IS4 family transposase | - |
| PG907_RS16630 | 3524198..3525526 | - | 1329 | WP_193027137.1 | IS4 family transposase | - |
| PG907_RS16635 | 3525621..3526301 | + | 681 | Protein_3261 | HrgA protein | - |
| PG907_RS16640 | 3526724..3527056 | + | 333 | WP_275760430.1 | DUF1484 family protein | - |
| PG907_RS16645 | 3527110..3527406 | - | 297 | WP_193029343.1 | hypothetical protein | - |
| PG907_RS16650 | 3527474..3527935 | - | 462 | WP_275760432.1 | lysozyme | - |
| PG907_RS16655 | 3528059..3528541 | - | 483 | WP_197366414.1 | hypothetical protein | - |
| PG907_RS16660 | 3528538..3528828 | - | 291 | WP_193035592.1 | DUF6127 family protein | - |
| PG907_RS16665 | 3528896..3529120 | - | 225 | WP_197366415.1 | hypothetical protein | - |
| PG907_RS16670 | 3529130..3530974 | - | 1845 | WP_197366416.1 | hypothetical protein | - |
| PG907_RS16675 | 3530981..3531379 | - | 399 | WP_193027064.1 | hypothetical protein | - |
| PG907_RS16680 | 3531376..3531858 | - | 483 | WP_193027062.1 | hypothetical protein | - |
| PG907_RS16685 | 3531862..3533028 | - | 1167 | WP_193027060.1 | hypothetical protein | - |
| PG907_RS16690 | 3533025..3536615 | - | 3591 | WP_275760434.1 | hypothetical protein | - |
| PG907_RS16695 | 3536616..3537011 | - | 396 | WP_197366418.1 | hypothetical protein | - |
| PG907_RS16700 | 3537017..3541117 | - | 4101 | WP_275760264.1 | tape measure protein | - |
| PG907_RS16705 | 3541193..3541444 | + | 252 | WP_020749302.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PG907_RS16710 | 3541441..3541854 | + | 414 | WP_193026209.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PG907_RS16715 | 3541999..3543081 | - | 1083 | WP_275760435.1 | DNA cytosine methyltransferase | - |
| PG907_RS16720 | 3543821..3544111 | + | 291 | WP_275760436.1 | DNA-binding protein Bv3F | VF |
| PG907_RS16725 | 3544155..3544799 | - | 645 | WP_193035574.1 | DUF6441 family protein | - |
| PG907_RS16730 | 3544774..3544941 | - | 168 | WP_275760438.1 | hypothetical protein | - |
| PG907_RS16735 | 3544992..3545384 | - | 393 | WP_275760439.1 | hypothetical protein | - |
| PG907_RS16740 | 3545393..3546163 | - | 771 | WP_275760440.1 | hypothetical protein | - |
| PG907_RS16745 | 3546296..3546742 | - | 447 | WP_197366474.1 | hypothetical protein | - |
| PG907_RS16750 | 3546758..3547060 | - | 303 | WP_275760441.1 | hypothetical protein | - |
| PG907_RS16755 | 3547063..3548067 | - | 1005 | WP_275760442.1 | major capsid protein | - |
| PG907_RS16760 | 3548083..3548460 | - | 378 | WP_247539095.1 | head decoration protein | - |
| PG907_RS16765 | 3548470..3549717 | - | 1248 | WP_275760443.1 | S49 family peptidase | - |
| PG907_RS16770 | 3549727..3551253 | - | 1527 | WP_275760444.1 | phage portal protein | - |
| PG907_RS16775 | 3551253..3551474 | - | 222 | WP_193026223.1 | hypothetical protein | - |
| PG907_RS16780 | 3551474..3551866 | - | 393 | WP_197366462.1 | hypothetical protein | - |
| PG907_RS16785 | 3551877..3552386 | - | 510 | WP_275760446.1 | hypothetical protein | - |
| PG907_RS16790 | 3552430..3554397 | - | 1968 | WP_275760447.1 | phage terminase large subunit family protein | - |
| PG907_RS16795 | 3554397..3554933 | - | 537 | WP_197366340.1 | elements of external origin | - |
| PG907_RS16800 | 3555031..3555303 | + | 273 | WP_230643305.1 | hypothetical protein | - |
| PG907_RS16805 | 3555467..3556156 | - | 690 | WP_230643301.1 | YopT-type cysteine protease domain-containing protein | - |
| PG907_RS16810 | 3556643..3557113 | + | 471 | WP_197366337.1 | DUF3489 domain-containing protein | - |
| PG907_RS16815 | 3557399..3557608 | + | 210 | WP_064049969.1 | hypothetical protein | - |
| PG907_RS16820 | 3557608..3557886 | + | 279 | WP_197366336.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PG907_RS16825 | 3558007..3558333 | + | 327 | WP_197366343.1 | DUF3489 domain-containing protein | - |
| PG907_RS16830 | 3558457..3558645 | + | 189 | WP_138928254.1 | hypothetical protein | - |
| PG907_RS16835 | 3558918..3559655 | + | 738 | WP_230643298.1 | type III secretion system effector protein | - |
| PG907_RS16840 | 3559660..3560928 | - | 1269 | WP_275760448.1 | site-specific DNA-methyltransferase | - |
| PG907_RS16845 | 3560925..3562325 | - | 1401 | WP_275760449.1 | site-specific DNA-methyltransferase | - |
| PG907_RS16850 | 3562876..3563175 | - | 300 | WP_275760450.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PG907_RS16855 | 3563175..3563441 | - | 267 | WP_193035544.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PG907_RS16860 | 3563495..3563878 | - | 384 | WP_193035542.1 | DUF6362 family protein | - |
| PG907_RS16865 | 3563871..3564080 | - | 210 | WP_193035540.1 | hypothetical protein | - |
| PG907_RS16870 | 3564082..3564546 | - | 465 | WP_193035538.1 | hypothetical protein | - |
| PG907_RS16875 | 3564689..3566968 | - | 2280 | WP_193035536.1 | phage/plasmid primase, P4 family | - |
| PG907_RS16880 | 3566965..3567225 | - | 261 | WP_193027027.1 | DNA-binding protein | - |
| PG907_RS16885 | 3567222..3567980 | - | 759 | WP_193027026.1 | hypothetical protein | - |
| PG907_RS16890 | 3567967..3568515 | - | 549 | WP_193035534.1 | HNH endonuclease | - |
| PG907_RS16895 | 3568515..3569000 | - | 486 | WP_193035531.1 | DUF6511 domain-containing protein | - |
| PG907_RS16900 | 3569008..3569655 | - | 648 | WP_275760451.1 | hypothetical protein | - |
| PG907_RS16905 | 3569652..3570524 | - | 873 | WP_193035527.1 | ATP-binding protein | - |
| PG907_RS16910 | 3570521..3571003 | - | 483 | WP_247360843.1 | hypothetical protein | - |
| PG907_RS16915 | 3571014..3571277 | - | 264 | WP_247360827.1 | DNA-binding protein | - |
| PG907_RS16920 | 3571506..3571946 | + | 441 | WP_193027019.1 | helix-turn-helix domain-containing protein | - |
| PG907_RS16925 | 3572014..3574251 | + | 2238 | WP_275760452.1 | hypothetical protein | - |
| PG907_RS16930 | 3574361..3575035 | - | 675 | WP_247360823.1 | hypothetical protein | - |
| PG907_RS16935 | 3575215..3575406 | + | 192 | WP_231688813.1 | hypothetical protein | - |
| PG907_RS16940 | 3575406..3575855 | + | 450 | WP_197366322.1 | DUF2924 domain-containing protein | - |
| PG907_RS16945 | 3575852..3577240 | + | 1389 | WP_197366321.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| PG907_RS16950 | 3577237..3577611 | + | 375 | WP_197366320.1 | site-specific recombinase resolvase | - |
| PG907_RS16955 | 3577608..3578081 | + | 474 | WP_193035512.1 | hypothetical protein | - |
| PG907_RS16960 | 3578257..3579108 | + | 852 | WP_275760453.1 | restriction endonuclease | - |
| PG907_RS16965 | 3579684..3580124 | - | 441 | WP_197365656.1 | hypothetical protein | - |
| PG907_RS16970 | 3580121..3580861 | - | 741 | WP_197365655.1 | TIGR04255 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|