MGE detailed information
MGE type: Prophage MGE length: 40429 bp
Accession: NZ_CP115941 Location: 966822..1007250 Organism: Ralstonia syzygii strain BDBR229 Replicon: chromosome
Accession: NZ_CP115941 Location: 966822..1007250 Organism: Ralstonia syzygii strain BDBR229 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PG904_RS04475 | 962027..963235 | + | 1209 | WP_078222106.1 | efflux RND transporter periplasmic adaptor subunit | - |
| PG904_RS04480 | 963314..966433 | + | 3120 | WP_078222105.1 | efflux RND transporter permease subunit | - |
| PG904_RS04490 | 966822..967826 | + | 1005 | WP_071623735.1 | hypothetical protein ; Integrase | Integrase |
| PG904_RS04495 | 967827..968135 | - | 309 | WP_071623736.1 | hypothetical protein | - |
| PG904_RS04500 | 968189..969667 | - | 1479 | WP_078222104.1 | hypothetical protein | - |
| PG904_RS04505 | 969669..970469 | - | 801 | WP_071623738.1 | PRTRC system ThiF family protein | - |
| PG904_RS04510 | 970466..971251 | - | 786 | WP_071623739.1 | PRTRC system protein A | - |
| PG904_RS04515 | 971253..971975 | - | 723 | WP_072633557.1 | PRTRC system protein B | - |
| PG904_RS04520 | 971983..973032 | - | 1050 | WP_078222103.1 | PRTRC system protein F | - |
| PG904_RS04525 | 973029..973418 | - | 390 | WP_078222102.1 | PRTRC system protein C | - |
| PG904_RS04530 | 973431..974021 | - | 591 | WP_078222101.1 | PRTRC system protein E | - |
| PG904_RS04535 | 974047..974283 | - | 237 | WP_078222100.1 | hypothetical protein | - |
| PG904_RS04540 | 974280..974711 | - | 432 | WP_078222099.1 | hypothetical protein | - |
| PG904_RS04545 | 974721..974936 | - | 216 | WP_078223121.1 | hypothetical protein | - |
| PG904_RS04550 | 974942..975094 | - | 153 | WP_172840140.1 | hypothetical protein | - |
| PG904_RS04555 | 975091..975528 | - | 438 | WP_078222098.1 | hypothetical protein | - |
| PG904_RS04560 | 975525..975899 | - | 375 | WP_078222097.1 | hypothetical protein | - |
| PG904_RS04565 | 975908..976045 | - | 138 | WP_157048845.1 | hypothetical protein | - |
| PG904_RS04570 | 976593..977357 | - | 765 | WP_078222095.1 | hypothetical protein | - |
| PG904_RS04575 | 977496..977933 | - | 438 | WP_231646666.1 | helix-turn-helix transcriptional regulator | - |
| PG904_RS04580 | 978577..979080 | + | 504 | WP_011001616.1 | hypothetical protein | - |
| PG904_RS04585 | 979077..979487 | + | 411 | WP_078222093.1 | hypothetical protein | - |
| PG904_RS04590 | 979496..979693 | + | 198 | WP_011001618.1 | hypothetical protein | - |
| PG904_RS04595 | 979690..980724 | + | 1035 | WP_078222092.1 | hypothetical protein | - |
| PG904_RS04600 | 980721..981017 | + | 297 | WP_011001619.1 | hypothetical protein | - |
| PG904_RS04605 | 981041..981643 | + | 603 | WP_078222091.1 | hypothetical protein | - |
| PG904_RS04610 | 981827..982201 | + | 375 | WP_078222090.1 | HNH endonuclease | - |
| PG904_RS04615 | 982455..982967 | + | 513 | WP_231646665.1 | P27 family phage terminase small subunit | - |
| PG904_RS04620 | 983012..984682 | + | 1671 | WP_071623755.1 | terminase large subunit | - |
| PG904_RS04625 | 984685..984843 | + | 159 | WP_011001622.1 | hypothetical protein | - |
| PG904_RS04630 | 984840..986063 | + | 1224 | WP_011001623.1 | phage portal protein | - |
| PG904_RS04635 | 986071..986682 | + | 612 | WP_028853138.1 | HK97 family phage prohead protease | - |
| PG904_RS04640 | 986693..987931 | + | 1239 | WP_078222089.1 | phage major capsid protein | - |
| PG904_RS04645 | 987965..988288 | + | 324 | WP_078222088.1 | head-tail connector protein | - |
| PG904_RS04650 | 988296..988622 | + | 327 | WP_072633576.1 | phage head closure protein | - |
| PG904_RS04655 | 988625..989128 | + | 504 | WP_078222087.1 | hypothetical protein | - |
| PG904_RS04660 | 989118..989471 | + | 354 | WP_078222086.1 | DUF3168 domain-containing protein | - |
| PG904_RS04665 | 989535..990188 | + | 654 | WP_078222085.1 | phage tail protein | - |
| PG904_RS04670 | 990194..990520 | + | 327 | WP_078222084.1 | phage tail assembly chaperone | - |
| PG904_RS04675 | 990568..990828 | + | 261 | WP_078222083.1 | DUF1799 domain-containing protein | - |
| PG904_RS04680 | 990830..993703 | + | 2874 | WP_078222082.1 | phage tail tape measure protein | - |
| PG904_RS04685 | 993706..994044 | + | 339 | WP_078222081.1 | phage tail protein | - |
| PG904_RS04690 | 994041..994718 | + | 678 | WP_078222080.1 | phage tail protein | - |
| PG904_RS04695 | 994724..995320 | + | 597 | WP_078222079.1 | tail fiber assembly protein | - |
| PG904_RS04700 | 995317..996018 | + | 702 | WP_078222078.1 | phage minor tail protein L | - |
| PG904_RS04705 | 996020..996730 | + | 711 | WP_072633587.1 | C40 family peptidase | - |
| PG904_RS04710 | 996734..997336 | + | 603 | WP_072633645.1 | tail assembly protein | - |
| PG904_RS04715 | 997406..997744 | - | 339 | WP_028853154.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PG904_RS04720 | 997741..997995 | - | 255 | WP_072633588.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PG904_RS04725 | 998046..1001201 | + | 3156 | WP_078222077.1 | host specificity protein J | - |
| PG904_RS04730 | 1001538..1002194 | + | 657 | WP_078222075.1 | hypothetical protein | - |
| PG904_RS04735 | 1002263..1002754 | + | 492 | WP_011001641.1 | glycoside hydrolase family protein | - |
| PG904_RS04740 | 1002754..1003062 | + | 309 | WP_011001642.1 | hypothetical protein | - |
| PG904_RS04745 | 1003065..1003340 | + | 276 | WP_011001643.1 | hypothetical protein | - |
| PG904_RS04750 | 1003340..1003885 | + | 546 | WP_011001644.1 | lysis system i-spanin subunit Rz | - |
| PG904_RS04755 | 1003989..1005059 | - | 1071 | WP_071623775.1 | hypothetical protein | - |
| PG904_RS04760 | 1005188..1005532 | - | 345 | WP_231646664.1 | hypothetical protein | - |
| PG904_RS04765 | 1005522..1006559 | - | 1038 | WP_078223119.1 | LysM domain-containing protein | - |
| PG904_RS04770 | 1006639..1006959 | - | 321 | WP_172840138.1 | hypothetical protein | - |
| PG904_RS04775 | 1007056..1007250 | + | 195 | WP_075464125.1 | hypothetical protein | - |
| PG904_RS04780 | 1007636..1009642 | + | 2007 | WP_078222074.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| PG904_RS04785 | 1009876..1011225 | + | 1350 | WP_013212425.1 | trigger factor | - |
| PG904_RS04790 | 1011255..1011908 | + | 654 | WP_003267806.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|