MGE detailed information

MGE type: Conjugative plasmid        MGE length: 162490 bp
Accession: NZ_CP115933        Location: 1..162490         Organism: Klebsiella pneumoniae subsp. pneumoniae strain 43UC01       Replicon: plasmid pKpUC43_162k


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DLD89_RS27090 (DLD89_27085) 151..363 + 213 WP_004152718.1 hypothetical protein -
DLD89_RS27095 (DLD89_27090) 374..598 + 225 WP_004152719.1 hypothetical protein -
DLD89_RS27100 (DLD89_27095) 679..999 + 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
DLD89_RS27105 (DLD89_27100) 989..1267 + 279 WP_004152721.1 helix-turn-helix transcriptional regulator -
DLD89_RS27110 (DLD89_27105) 1268..1681 + 414 WP_004152722.1 helix-turn-helix domain-containing protein -
DLD89_RS27115 (DLD89_27110) 2515..3336 + 822 WP_004178064.1 DUF932 domain-containing protein -
DLD89_RS27120 (DLD89_27115) 3369..3698 + 330 WP_011977736.1 DUF5983 family protein -
DLD89_RS27125 (DLD89_27120) 3731..4216 - 486 WP_004178063.1 hypothetical protein VF
DLD89_RS27130 (DLD89_27125) 4650..5042 + 393 WP_004178062.1 conjugal transfer relaxosome DNA-binding protein TraM -
DLD89_RS27135 (DLD89_27130) 5256..5951 + 696 WP_004178061.1 transcriptional regulator TraJ family protein -
DLD89_RS27140 (DLD89_27135) 6035..6406 + 372 WP_004208838.1 TraY domain-containing protein -
DLD89_RS27145 (DLD89_27140) 6460..6828 + 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
DLD89_RS27150 (DLD89_27145) 6842..7147 + 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
DLD89_RS27155 (DLD89_27150) 7167..7733 + 567 WP_004152602.1 type IV conjugative transfer system protein TraE -
DLD89_RS27160 (DLD89_27155) 7720..8460 + 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
DLD89_RS27165 (DLD89_27160) 8460..9884 + 1425 WP_004152600.1 F-type conjugal transfer pilus assembly protein TraB -
DLD89_RS27170 (DLD89_27165) 9877..10473 + 597 WP_004152599.1 conjugal transfer pilus-stabilizing protein TraP -
DLD89_RS27175 (DLD89_27170) 10496..11065 + 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
DLD89_RS27180 (DLD89_27175) 11197..11607 + 411 WP_004152597.1 lipase chaperone -
DLD89_RS27185 (DLD89_27180) 11612..11902 + 291 WP_004152596.1 hypothetical protein -
DLD89_RS27190 (DLD89_27185) 11926..12144 + 219 WP_004171484.1 hypothetical protein -
DLD89_RS27195 (DLD89_27190) 12145..12462 + 318 WP_004152595.1 hypothetical protein -
DLD89_RS27200 (DLD89_27195) 12529..12933 + 405 WP_004152594.1 hypothetical protein -
DLD89_RS27205 (DLD89_27200) 13229..13627 + 399 WP_004153071.1 hypothetical protein -
DLD89_RS27210 (DLD89_27205) 13699..16338 + 2640 WP_004152592.1 type IV secretion system protein TraC -
DLD89_RS27215 (DLD89_27210) 16338..16727 + 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
DLD89_RS27220 (DLD89_27215) 16727..17353 + 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
DLD89_RS27225 (DLD89_27220) 17397..18356 + 960 WP_015065634.1 conjugal transfer pilus assembly protein TraU -
DLD89_RS27230 (DLD89_27225) 18369..19007 + 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
DLD89_RS27235 (DLD89_27230) 19055..21011 + 1957 Protein_30 type-F conjugative transfer system mating-pair stabilization protein TraN -
DLD89_RS27240 (DLD89_27235) 21043..21279 + 237 WP_004152683.1 conjugal transfer protein TrbE -
DLD89_RS27245 (DLD89_27240) 21507..21833 + 327 WP_004152685.1 hypothetical protein -
DLD89_RS27250 (DLD89_27245) 21854..22605 + 752 Protein_33 type-F conjugative transfer system pilin assembly protein TraF -
DLD89_RS27255 (DLD89_27250) 22616..22855 + 240 WP_004152687.1 type-F conjugative transfer system pilin chaperone TraQ -
DLD89_RS27260 (DLD89_27255) 22827..23399 + 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
DLD89_RS27265 (DLD89_27260) 23392..23819 + 428 Protein_36 conjugal transfer protein TrbF -
DLD89_RS27270 (DLD89_27265) 23806..25175 + 1370 Protein_37 conjugal transfer protein TraH -
DLD89_RS27275 (DLD89_27270) 25175..28023 + 2849 Protein_38 conjugal transfer mating pair stabilization protein TraG -
DLD89_RS27280 (DLD89_27275) 28029..28556 + 528 WP_004153030.1 hypothetical protein -
DLD89_RS27285 (DLD89_27280) 28746..29476 + 731 Protein_40 complement resistance protein TraT -
DLD89_RS27290 (DLD89_27285) 29836..32136 + 2301 Protein_41 type IV conjugative transfer system coupling protein TraD -
DLD89_RS27295 (DLD89_27290) 32136..37391 + 5256 Protein_42 conjugative transfer relaxase/helicase TraI -
DLD89_RS27300 (DLD89_27295) 37471..38196 + 726 WP_004152303.1 type-F conjugative transfer system pilin acetylase TraX -
DLD89_RS27305 (DLD89_27300) 38351..38946 + 596 Protein_44 fertility inhibition protein FinO -
DLD89_RS27310 (DLD89_27305) 38966..39313 + 348 WP_004152301.1 DUF6404 family protein -
DLD89_RS27315 (DLD89_27310) 39528..40073 - 546 WP_004152300.1 hypothetical protein -
DLD89_RS27320 (DLD89_27315) 40430..42740 + 2311 Protein_47 klebicin B-related nuclease bacteriocin -
DLD89_RS27325 (DLD89_27320) 42742..43020 + 279 WP_004152296.1 bacteriocin immunity protein -
DLD89_RS27330 (DLD89_27325) 43104..43184 + 81 Protein_49 hypothetical protein -
DLD89_RS27335 (DLD89_27330) 43289..43840 + 552 WP_004152294.1 Phospholipase D VF
DLD89_RS27340 (DLD89_27335) 44161..44439 + 279 WP_004199332.1 replication regulatory protein RepA -
DLD89_RS27345 (DLD89_27340) 44656..44733 + 78 WP_004171457.1 RepA leader peptide Tap -
DLD89_RS27350 (DLD89_27345) 44726..45583 + 858 WP_004152292.1 incFII family plasmid replication initiator RepA -
DLD89_RS27355 (DLD89_27350) 47030..49225 - 2196 WP_000093087.1 DEAD/DEAH box helicase -
DLD89_RS27360 (DLD89_27355) 49222..50538 - 1317 WP_004152291.1 ATP-binding protein -
DLD89_RS27365 (DLD89_27360) 50542..52851 - 2310 WP_004152290.1 TerB N-terminal domain-containing protein -
DLD89_RS27370 (DLD89_27365) 53496..54465 - 970 Protein_57 IS5 family transposase IS903B Transposase
DLD89_RS27375 (DLD89_27370) 54557..55810 - 1254 WP_003846917.1 lactose permease -
DLD89_RS27380 (DLD89_27375) 55862..58936 - 3075 WP_004152287.1 beta-galactosidase -
DLD89_RS27385 (DLD89_27380) 59058..60140 - 1083 WP_004152286.1 DNA-binding transcriptional repressor LacI -
DLD89_RS27390 (DLD89_27385) 60176..60258 - 83 Protein_61 hypothetical protein -
DLD89_RS27395 (DLD89_27390) 60601..61611 + 1011 WP_004152284.1 zinc-binding alcohol dehydrogenase family protein -
DLD89_RS27400 (DLD89_27395) 62035..62232 + 198 WP_072050298.1 EAL domain-containing protein -
DLD89_RS27405 (DLD89_27400) 62261..62513 - 253 Protein_64 IS66 family transposase -
DLD89_RS27410 (DLD89_27405) 62563..62856 - 294 WP_004118251.1 IS66 family transposase ISKpn24 Transposase
DLD89_RS27415 (DLD89_27410) 62955..63722 - 768 WP_004152282.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
DLD89_RS27420 (DLD89_27415) 63723..64679 - 957 WP_004152281.1 Fe(3+) dicitrate transport system permease protein FecD VF
DLD89_RS27425 (DLD89_27420) 64676..65674 - 999 WP_004118243.1 Fe(3+) dicitrate transport system permease protein FecC VF
DLD89_RS27430 (DLD89_27425) 65671..66573 - 903 WP_004118241.1 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB -
DLD89_RS27435 (DLD89_27430) 66618..68942 - 2325 WP_004152280.1 TonB-dependent Fe(3+) dicitrate receptor FecA -
DLD89_RS27440 (DLD89_27435) 69028..69981 - 954 WP_004118237.1 ferric citrate uptake sigma factor regulator FecR -
DLD89_RS27445 (DLD89_27440) 69978..70499 - 522 WP_004118235.1 putative RNA polymerase sigma factor FecI VF
DLD89_RS27450 (DLD89_27445) 70636..70705 + 70 Protein_73 hypothetical protein -
DLD89_RS27455 (DLD89_27450) 70975..71460 - 486 Protein_74 IS21 family transposase ISEc62 Transposase
DLD89_RS27460 (DLD89_27455) 71461..71673 - 213 WP_161989521.1 hypothetical protein -
DLD89_RS27465 (DLD89_27460) 71668..71769 + 102 Protein_76 integrase -
DLD89_RS27470 (DLD89_27465) 72054..73181 + 1128 WP_004118840.1 transporter substrate-binding protein -
DLD89_RS27475 (DLD89_27470) 73178..73771 + 594 WP_004118229.1 ANTAR domain-containing protein -
DLD89_RS27480 (DLD89_27475) 73768..74616 + 849 WP_004152279.1 ABC transporter permease -
DLD89_RS27485 (DLD89_27480) 74616..75536 + 921 WP_004118227.1 ABC transporter permease -
DLD89_RS27490 (DLD89_27485) 75549..77153 + 1605 WP_004152278.1 ABC transporter substrate-binding protein -
DLD89_RS27495 (DLD89_27490) 77198..78145 + 948 WP_004118225.1 acetamidase/formamidase family protein -
DLD89_RS27500 (DLD89_27495) 78153..79886 + 1734 WP_004118832.1 Glutathione import ATP-binding protein GsiA VF
DLD89_RS27505 (DLD89_27500) 81707..82084 - 378 Protein_84 IS66 family transposase ISEc22 Transposase
DLD89_RS27510 (DLD89_27505) 82122..83659 - 1538 Protein_85 IS66 family transposase ISCfr14 Transposase
DLD89_RS27515 (DLD89_27510) 83709..84056 - 348 WP_004152557.1 IS66 family transposase ISCfr14 Transposase
DLD89_RS27520 (DLD89_27515) 84053..84430 - 378 WP_004114613.1 IS66 family transposase ISSgsp1 Transposase
DLD89_RS27525 (DLD89_27520) 84987..85622 - 636 WP_004118217.1 His-Xaa-Ser repeat protein HxsA -
DLD89_RS27530 (DLD89_27525) 85619..86731 - 1113 WP_000005560.1 His-Xaa-Ser system radical SAM maturase HxsC -
DLD89_RS27535 (DLD89_27530) 86724..88112 - 1389 WP_004118216.1 His-Xaa-Ser system radical SAM maturase HxsB -
DLD89_RS27540 (DLD89_27535) 88112..88351 - 240 WP_176716597.1 His-Xaa-Ser system protein HxsD -
DLD89_RS27550 (DLD89_27545) 89320..89979 + 660 WP_000412211.1 Chloramphenicol acetyltransferase ARG
DLD89_RS27555 (DLD89_27550) 90180..90557 - 378 WP_000656305.1 GNAT family N-acetyltransferase -
DLD89_RS27560 (DLD89_27555) 90624..93590 - 2967 WP_001138064.1 Tn3 family transposase TnpA_TnAs3 Transposase
DLD89_RS27565 (DLD89_27560) 93593..94153 - 561 WP_000147567.1 Tn3 family transposase TnpR_TnAs3 Transposase
DLD89_RS27570 (DLD89_27565) 94279..94629 - 351 WP_000454193.1 DUF3330 domain-containing protein -
DLD89_RS27575 (DLD89_27570) 94832..95845 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
DLD89_RS27580 (DLD89_27575) 95990..96487 + 498 WP_001083725.1 IS1595 family transposase ISSsu9 ARG
DLD89_RS27585 (DLD89_27580) 96599..96889 + 291 WP_001336345.1 DUF1010 domain-containing protein -
DLD89_RS27590 (DLD89_27585) 96895..97733 + 839 Protein_101 Streptomycin 3''-adenylyltransferase ARG
DLD89_RS27595 (DLD89_27590) 97850..98197 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
DLD89_RS27600 (DLD89_27595) 98191..99030 + 840 WP_000259031.1 Dihydropteroate synthase ARG
DLD89_RS27605 (DLD89_27600) 99158..99361 + 204 WP_000376616.1 hypothetical protein -
DLD89_RS27610 (DLD89_27605) 99517..100722 + 1206 WP_000184001.1 chromate efflux transporter -
DLD89_RS27615 (DLD89_27610) 100733..101038 + 306 WP_000130000.1 Transcriptional regulator Relaxase
DLD89_RS27620 (DLD89_27615) 101082..101147 + 66 Protein_107 EAL domain-containing protein -
DLD89_RS27625 (DLD89_27620) 101265..102029 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
DLD89_RS27630 (DLD89_27625) 102522..103106 - 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
DLD89_RS27635 (DLD89_27630) 103106..104344 - 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
DLD89_RS27640 (DLD89_27635) 104341..105246 - 906 WP_000219391.1 hypothetical protein ARG
DLD89_RS27645 (DLD89_27640) 105368..106072 - 705 WP_004217321.1 IS6 family transposase IS26 Transposase
DLD89_RS27650 (DLD89_27645) 106156..107328 + 1173 Protein_113 Tn3 family transposase TnpA_ISSba14 Transposase
DLD89_RS27655 (DLD89_27650) 107376..108044 + 669 WP_044117068.1 IS6 family transposase IS26 Transposase
DLD89_RS27660 (DLD89_27655) 108250..108558 - 309 Protein_115 IS5 family transposase ISThi1 Transposase
DLD89_RS27665 (DLD89_27660) 108900..109727 + 828 WP_004153729.1 Glutamine transport ATP-binding protein GlnQ VF
DLD89_RS27670 (DLD89_27665) 109724..110587 + 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
DLD89_RS27675 (DLD89_27670) 110596..111423 + 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
DLD89_RS27680 (DLD89_27675) 111432..112442 + 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
DLD89_RS27685 (DLD89_27680) 112436..113305 + 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
DLD89_RS27690 (DLD89_27685) 113413..113932 + 520 Protein_121 IS5 family transposase ISPst7 Transposase
DLD89_RS27705 (DLD89_27700) 116634..116750 - 117 Protein_124 transposase domain-containing protein -
DLD89_RS27710 (DLD89_27705) 116695..116958 - 264 WP_004118209.1 transposase -
DLD89_RS27715 (DLD89_27710) 116973..117236 + 264 WP_004118208.1 hypothetical protein -
DLD89_RS27720 (DLD89_27715) 117480..117761 + 282 WP_004152118.1 helix-turn-helix domain-containing protein -
DLD89_RS27725 (DLD89_27720) 117796..118365 + 570 WP_004152117.1 hypothetical protein VF
DLD89_RS27730 (DLD89_27725) 118480..121275 + 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
DLD89_RS27735 (DLD89_27730) 121275..121472 + 198 WP_004152115.1 hypothetical protein -
DLD89_RS27740 (DLD89_27735) 121710..121856 + 147 Protein_131 diguanylate cyclase -
DLD89_RS27745 (DLD89_27740) 121971..122459 + 489 WP_004152114.1 phosphate-starvation-inducible PsiE family protein -
DLD89_RS27750 (DLD89_27745) 122446..123408 + 963 WP_004152113.1 zinc metalloprotease HtpX -
DLD89_RS27755 (DLD89_27750) 123585..124750 + 1166 Protein_134 IS3 family transposase ISKpn38 Transposase
DLD89_RS27760 (DLD89_27755) 124959..125090 - 132 WP_004218042.1 hypothetical protein -
DLD89_RS27765 (DLD89_27760) 125251..126597 - 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
DLD89_RS27770 (DLD89_27765) 126809..127291 - 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
DLD89_RS27775 (DLD89_27770) 127279..127545 - 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
DLD89_RS27780 (DLD89_27775) 127721..127975 - 255 WP_004152108.1 hypothetical protein -
DLD89_RS27785 (DLD89_27780) 128051..128308 - 258 WP_004152107.1 hypothetical protein -
DLD89_RS27790 (DLD89_27785) 128357..128560 - 204 WP_004152106.1 HHA domain-containing protein -
DLD89_RS27795 (DLD89_27790) 128594..128962 - 369 WP_004152105.1 hypothetical protein -
DLD89_RS27800 (DLD89_27795) 129006..129500 - 495 WP_004152104.1 DNA-binding protein -
DLD89_RS27805 (DLD89_27800) 129531..130106 - 576 WP_004152103.1 hypothetical protein -
DLD89_RS27810 (DLD89_27805) 130094..130363 - 270 WP_004152102.1 hypothetical protein -
DLD89_RS27815 (DLD89_27810) 130933..131283 + 351 WP_000493378.1 hypothetical protein -
DLD89_RS27820 (DLD89_27815) 131334..132077 + 744 WP_000129823.1 hypothetical protein -
DLD89_RS27825 (DLD89_27820) 132074..132850 + 777 WP_000015958.1 site-specific integrase -
DLD89_RS27830 (DLD89_27825) 132908..133087 - 180 Protein_149 hypothetical protein -
DLD89_RS27835 (DLD89_27830) 133122..136125 - 3004 Protein_150 Tn3 family transposase TnpA_Tn3 Transposase
DLD89_RS27840 (DLD89_27835) 136287..136844 + 558 WP_001217881.1 Tn3 family transposase TnpR_Tn3 Transposase
DLD89_RS27845 (DLD89_27840) 137078..137632 + 555 WP_063840280.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
DLD89_RS27850 (DLD89_27845) 137702..137917 + 216 Protein_153 IS6 family transposase IS15 Transposase
DLD89_RS27855 (DLD89_27850) 137983..138687 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
DLD89_RS27860 (DLD89_27855) 138742..138912 + 171 Protein_155 serine hydrolase -
DLD89_RS27865 (DLD89_27860) 139043..139141 - 99 Protein_156 hypothetical protein -
DLD89_RS27870 (DLD89_27865) 139270..139374 - 105 WP_032409716.1 hypothetical protein -
DLD89_RS27875 (DLD89_27870) 139904..140770 + 867 WP_004118283.1 replication initiation protein -
DLD89_RS27880 (DLD89_27875) 140947..141216 - 270 WP_000339857.1 hypothetical protein -
DLD89_RS27885 (DLD89_27880) 141631..142836 + 1206 WP_000368714.1 AAA family ATPase -
DLD89_RS27890 (DLD89_27885) 142836..143810 + 975 WP_000064119.1 ParB family protein -
DLD89_RS27895 (DLD89_27890) 143892..145163 - 1272 WP_001754953.1 Y-family DNA polymerase -
DLD89_RS27900 (DLD89_27895) 145163..145594 - 432 WP_000776034.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
DLD89_RS27905 (DLD89_27900) 145998..147484 + 1487 Protein_164 group II intron reverse transcriptase/maturase -
DLD89_RS27910 (DLD89_27905) 147718..147948 + 231 WP_004152753.1 hypothetical protein -
DLD89_RS27915 (DLD89_27910) 148469..148894 + 426 WP_004118478.1 antirestriction protein -
DLD89_RS27920 (DLD89_27915) 149131..149385 + 255 WP_004152754.1 DNA polymerase III subunit theta -
DLD89_RS27925 (DLD89_27920) 149420..149737 + 318 WP_004118473.1 hypothetical protein -
DLD89_RS27930 (DLD89_27925) 150519..150746 + 228 WP_004178072.1 hypothetical protein -
DLD89_RS27935 (DLD89_27930) 150838..151068 + 231 WP_004198570.1 hypothetical protein -
DLD89_RS27940 (DLD89_27935) 151120..152475 + 1356 WP_004178068.1 DUF3560 domain-containing protein -
DLD89_RS27945 (DLD89_27940) 152523..153086 + 564 WP_004152645.1 methyltransferase -
DLD89_RS27950 (DLD89_27945) 153862..154404 + 543 WP_004152644.1 single-stranded DNA-binding protein -
DLD89_RS27955 (DLD89_27950) 154453..154701 + 249 WP_004152643.1 DUF905 domain-containing protein -
DLD89_RS27960 (DLD89_27955) 154771..156829 + 2059 Protein_175 ParB/RepB/Spo0J family partition protein -
DLD89_RS27965 (DLD89_27960) 156874..157305 + 432 WP_004152641.1 conjugation system SOS inhibitor PsiB -
DLD89_RS27970 (DLD89_27965) 157302..158030 + 729 WP_004152640.1 plasmid SOS inhibition protein A -
DLD89_RS27975 (DLD89_27970) 158027..158353 + 327 WP_004199358.1 hypothetical protein -
DLD89_RS27980 (DLD89_27975) 158409..158783 + 375 WP_004152638.1 hypothetical protein -
DLD89_RS27985 (DLD89_27980) 158961..160036 - 1076 Protein_180 IS481 family transposase ISKpn28 Transposase
DLD89_RS27990 (DLD89_27985) 160108..160269 + 162 WP_004118124.1 type I toxin-antitoxin system Hok family toxin -
DLD89_RS27995 (DLD89_27990) 160969..161241 + 273 WP_004152759.1 hypothetical protein -
DLD89_RS28000 (DLD89_27995) 161238..161588 + 351 WP_004152758.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance