MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 35410 bp
Accession: NZ_CP115818 Location: 1..35410 Organism: Pseudomonas mendocina strain GD22SC3150TT Replicon: plasmid pHN21SC3150TT-1
Accession: NZ_CP115818 Location: 1..35410 Organism: Pseudomonas mendocina strain GD22SC3150TT Replicon: plasmid pHN21SC3150TT-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAK23_RS20725 | 84..1643 | + | 1560 | WP_256825318.1 | PAS domain-containing methyl-accepting chemotaxis protein | - |
| PAK23_RS20730 | 1796..2680 | - | 885 | WP_276489363.1 | Y-family DNA polymerase | - |
| PAK23_RS20735 | 2688..3119 | - | 432 | WP_276489364.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PAK23_RS20740 | 3387..3635 | + | 249 | WP_102839343.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PAK23_RS20745 | 3648..3986 | + | 339 | WP_276489365.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PAK23_RS20750 | 4266..4955 | + | 690 | WP_276489366.1 | NYN domain-containing protein | - |
| PAK23_RS20755 | 5470..6111 | + | 642 | WP_276489367.1 | AAA family ATPase | - |
| PAK23_RS20760 | 6108..6425 | + | 318 | WP_276489368.1 | hypothetical protein | - |
| PAK23_RS20765 | 6718..7776 | + | 1059 | WP_276489369.1 | transposase | - |
| PAK23_RS20770 | 8809..10029 | - | 1221 | WP_276489370.1 | ATP-binding protein | - |
| PAK23_RS20775 | 10998..11264 | - | 267 | WP_276489371.1 | hypothetical protein | - |
| PAK23_RS20780 | 11918..16792 | - | 4875 | WP_276489372.1 | DEAD/DEAH box helicase family protein | - |
| PAK23_RS20785 | 17090..17389 | + | 300 | WP_276489373.1 | hypothetical protein | - |
| PAK23_RS20790 | 17817..17981 | - | 165 | WP_161801971.1 | hypothetical protein | - |
| PAK23_RS20795 | 18250..18507 | - | 258 | WP_276489354.1 | hypothetical protein | - |
| PAK23_RS20800 | 19416..19991 | + | 576 | WP_276489355.1 | hypothetical protein | - |
| PAK23_RS20805 | 20260..20853 | - | 594 | WP_276489356.1 | recombinase family protein | - |
| PAK23_RS20810 | 21020..21250 | - | 231 | WP_276489357.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| PAK23_RS20815 | 21502..22239 | + | 738 | WP_276489358.1 | replication initiation protein | - |
| PAK23_RS20820 | 22935..23333 | - | 399 | WP_276489359.1 | DUF4113 domain-containing protein | - |
| PAK23_RS20825 | 23379..26345 | - | 2967 | WP_276489360.1 | Tn3-like element TnAs1 family transposase | - |
| PAK23_RS20830 | 26349..26909 | - | 561 | WP_276489361.1 | recombinase family protein | - |
| PAK23_RS20835 | 27282..28295 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| PAK23_RS20840 | 28876..28965 | + | 90 | WP_276489374.1 | DUF3265 domain-containing protein | - |
| PAK23_RS20845 | 29189..29845 | + | 657 | WP_000415714.1 | quinolone resistance pentapeptide repeat protein QnrVC1 | - |
| PAK23_RS20850 | 30118..30339 | + | 222 | WP_017420735.1 | VF530 family protein | - |
| PAK23_RS20855 | 30492..31046 | + | 555 | WP_023622803.1 | aminoglycoside N-acetyltransferase AAC(6')-IIa | - |
| PAK23_RS20860 | 31308..32522 | + | 1215 | WP_084929431.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| PAK23_RS20865 | 32616..32732 | + | 117 | Protein_29 | DUF3363 domain-containing protein | - |
| PAK23_RS20870 | 32729..33355 | - | 627 | WP_000163574.1 | tetracycline resistance transcriptional repressor TetR(G) | - |
| PAK23_RS20875 | 33459..34622 | + | 1164 | WP_276489362.1 | tetracycline efflux MFS transporter Tet(G) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|