MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 29546 bp
Accession: NZ_CP115771 Location: 1..29546 Organism: Paracoccus sediminicola strain SCSIO 76264 Replicon: plasmid p3
Accession: NZ_CP115771 Location: 1..29546 Organism: Paracoccus sediminicola strain SCSIO 76264 Replicon: plasmid p3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PAF18_RS16970 (PAF18_16970) | 53..1087 | + | 1035 | WP_271118333.1 | replication initiator protein A | - |
| PAF18_RS16975 (PAF18_16975) | 1140..1424 | - | 285 | WP_271118334.1 | hypothetical protein | - |
| PAF18_RS16980 (PAF18_16980) | 1421..2071 | - | 651 | WP_271118335.1 | hypothetical protein | VF |
| PAF18_RS16985 (PAF18_16985) | 2289..2630 | + | 342 | WP_271118336.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PAF18_RS16990 (PAF18_16990) | 2627..2914 | + | 288 | WP_271118337.1 | helix-turn-helix domain-containing protein | - |
| PAF18_RS16995 (PAF18_16995) | 2918..3307 | - | 390 | Protein_5 | class I SAM-dependent DNA methyltransferase | - |
| PAF18_RS17000 (PAF18_17000) | 3370..4289 | + | 920 | Protein_6 | IS3 family transposase ISOba1 | Transposase |
| PAF18_RS17005 (PAF18_17005) | 4547..5566 | - | 1020 | WP_271118338.1 | IS110 family transposase ISCc4 | Transposase |
| PAF18_RS17010 (PAF18_17010) | 5529..5906 | + | 378 | Protein_8 | IS3 family transposase ISOba1 | Transposase |
| PAF18_RS17015 (PAF18_17015) | 5975..6367 | - | 393 | WP_271118339.1 | YbaN family protein | - |
| PAF18_RS17020 (PAF18_17020) | 6364..6837 | - | 474 | WP_271118340.1 | group III truncated hemoglobin | - |
| PAF18_RS17025 (PAF18_17025) | 6917..7351 | + | 435 | WP_271118341.1 | Rrf2 family transcriptional regulator | - |
| PAF18_RS17030 (PAF18_17030) | 7348..7599 | + | 252 | Protein_12 | DUF6522 family protein | - |
| PAF18_RS17035 (PAF18_17035) | 7599..8777 | + | 1179 | WP_271118342.1 | NnrS family protein | - |
| PAF18_RS17040 (PAF18_17040) | 8774..9445 | + | 672 | WP_271118343.1 | NnrU family protein | - |
| PAF18_RS17045 (PAF18_17045) | 9464..10168 | - | 705 | WP_271118344.1 | hypothetical protein | VF |
| PAF18_RS17050 (PAF18_17050) | 10182..11402 | - | 1221 | WP_271118349.1 | copper-containing nitrite reductase | - |
| PAF18_RS17055 (PAF18_17055) | 11500..11940 | - | 441 | WP_271118345.1 | pseudoazurin | - |
| PAF18_RS17060 (PAF18_17060) | 12107..12823 | + | 717 | WP_271118346.1 | Crp/Fnr family transcriptional regulator | - |
| PAF18_RS17065 (PAF18_17065) | 12826..13293 | - | 468 | WP_271118347.1 | hemerythrin domain-containing protein | - |
| PAF18_RS17070 (PAF18_17070) | 13508..15613 | + | 2106 | WP_271118348.1 | putative copper-importing P-type ATPase A | VF |
| PAF18_RS17075 (PAF18_17075) | 15610..15783 | + | 174 | WP_271118318.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
| PAF18_RS17080 (PAF18_17080) | 15780..17432 | + | 1653 | WP_271118319.1 | cytochrome-c oxidase, cbb3-type subunit I | - |
| PAF18_RS17085 (PAF18_17085) | 17437..18213 | + | 777 | WP_271118320.1 | cytochrome-c oxidase, cbb3-type subunit II | - |
| PAF18_RS17090 (PAF18_17090) | 18215..18385 | + | 171 | WP_271118321.1 | cbb3-type cytochrome c oxidase subunit 3 | - |
| PAF18_RS17095 (PAF18_17095) | 18376..19254 | + | 879 | WP_271118322.1 | cytochrome-c oxidase, cbb3-type subunit III | - |
| PAF18_RS17100 (PAF18_17100) | 19415..20296 | + | 882 | WP_271118323.1 | DUF2189 domain-containing protein | - |
| PAF18_RS17105 (PAF18_17105) | 20373..21056 | - | 684 | WP_271118324.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| PAF18_RS17110 (PAF18_17110) | 21370..22566 | - | 1197 | WP_271115968.1 | IS256 family transposase ISPso1 | Transposase |
| PAF18_RS17115 (PAF18_17115) | 23068..23358 | - | 291 | WP_271118325.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| PAF18_RS17120 (PAF18_17120) | 23370..23651 | - | 282 | WP_271118326.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PAF18_RS17125 (PAF18_17125) | 23808..24434 | - | 627 | WP_271118327.1 | hypothetical protein | - |
| PAF18_RS17130 (PAF18_17130) | 24518..24922 | - | 405 | WP_271118328.1 | hypothetical protein | - |
| PAF18_RS17135 (PAF18_17135) | 24915..25181 | - | 267 | WP_271118329.1 | ribbon-helix-helix protein, CopG family | - |
| PAF18_RS17140 (PAF18_17140) | 25174..25788 | - | 615 | WP_271118330.1 | ParA family protein | - |
| PAF18_RS17145 (PAF18_17145) | 26356..27552 | + | 1197 | WP_271115968.1 | IS256 family transposase ISPso1 | Transposase |
| PAF18_RS17150 (PAF18_17150) | 27704..28327 | - | 624 | WP_271118331.1 | hypothetical protein | - |
| PAF18_RS17155 (PAF18_17155) | 28566..29165 | - | 600 | WP_271118332.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|