MGE detailed information
MGE type: Prophage MGE length: 86272 bp
Accession: NZ_CP115707 Location: 1893583..1979854 Organism: Klebsiella pneumoniae strain CPE16 Replicon: chromosome
Accession: NZ_CP115707 Location: 1893583..1979854 Organism: Klebsiella pneumoniae strain CPE16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGD48_RS09215 () | 1889104..1889673 | + | 570 | WP_004180441.1 | VOC family protein | - |
| PGD48_RS09220 () | 1889750..1890493 | + | 744 | WP_004180440.1 | copper homeostasis protein CutC | - |
| PGD48_RS09225 () | 1890575..1891579 | - | 1005 | WP_004151451.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| PGD48_RS09230 () | 1891576..1892319 | - | 744 | WP_002911486.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| PGD48_RS09235 () | 1892359..1892754 | - | 396 | WP_002911484.1 | MAPEG family protein | - |
| PGD48_RS09240 () | 1892807..1893586 | - | 780 | WP_043906717.1 | DUF72 domain-containing protein | - |
| PGD48_RS09245 () | 1893583..1894842 | - | 1260 | WP_043906718.1 | Putative defective protein IntQ ; Integrase | Integrase |
| PGD48_RS09250 () | 1894885..1895130 | - | 246 | WP_023283988.1 | excisionase family protein | - |
| PGD48_RS09255 () | 1895134..1895352 | - | 219 | WP_043906719.1 | TraR/DksA family transcriptional regulator | - |
| PGD48_RS09260 () | 1895349..1896113 | - | 765 | WP_043906720.1 | hypothetical protein | - |
| PGD48_RS09265 () | 1896110..1896382 | - | 273 | WP_020805516.1 | hypothetical protein | - |
| PGD48_RS09270 () | 1896379..1896604 | - | 226 | Protein_1812 | hypothetical protein | - |
| PGD48_RS09275 () | 1896601..1897128 | - | 528 | WP_043906973.1 | phage N-6-adenine-methyltransferase | - |
| PGD48_RS09280 () | 1897157..1897780 | - | 624 | WP_043906721.1 | YqaJ viral recombinase family protein | - |
| PGD48_RS09285 () | 1897777..1898523 | - | 747 | WP_008807812.1 | phage recombination protein Bet | - |
| PGD48_RS09290 () | 1898540..1898824 | - | 285 | WP_043906722.1 | host nuclease inhibitor GamL | - |
| PGD48_RS09295 () | 1898832..1899803 | - | 972 | WP_043906723.1 | hypothetical protein | - |
| PGD48_RS09300 () | 1899891..1900085 | - | 195 | WP_019704100.1 | hypothetical protein | - |
| PGD48_RS09305 () | 1900078..1900188 | - | 111 | WP_043906974.1 | hypothetical protein | - |
| PGD48_RS09310 () | 1900598..1901296 | - | 699 | WP_043906724.1 | DUF1640 domain-containing protein | - |
| PGD48_RS09315 () | 1901296..1901616 | - | 321 | WP_043906725.1 | hypothetical protein | - |
| PGD48_RS09320 () | 1901662..1902045 | - | 384 | WP_230128855.1 | S24 family peptidase | - |
| PGD48_RS09325 () | 1902166..1902300 | - | 135 | Protein_1823 | helix-turn-helix transcriptional regulator | - |
| PGD48_RS09330 () | 1902453..1902680 | + | 228 | WP_004194000.1 | Cro/Cl family transcriptional regulator | - |
| PGD48_RS09335 () | 1902719..1902940 | + | 222 | WP_001548453.1 | CII family transcriptional regulator | - |
| PGD48_RS09340 () | 1903074..1903802 | + | 729 | WP_032453659.1 | helix-turn-helix domain-containing protein | - |
| PGD48_RS09345 () | 1903799..1904575 | + | 777 | WP_043906727.1 | replication protein P | - |
| PGD48_RS09350 () | 1904575..1904877 | + | 303 | WP_043906728.1 | hypothetical protein | - |
| PGD48_RS09355 () | 1904874..1905263 | + | 390 | WP_043906729.1 | hypothetical protein | - |
| PGD48_RS09360 () | 1905260..1906168 | + | 909 | WP_032458656.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PGD48_RS09365 () | 1906165..1906851 | + | 687 | WP_043906730.1 | hypothetical protein | - |
| PGD48_RS09370 () | 1907024..1907311 | + | 288 | WP_032428632.1 | hypothetical protein | - |
| PGD48_RS09375 () | 1907311..1907568 | + | 258 | WP_043906731.1 | DNA polymerase III subunit theta | - |
| PGD48_RS09380 () | 1907664..1908260 | + | 597 | WP_043906732.1 | DUF1367 family protein | - |
| PGD48_RS09385 () | 1908266..1908436 | + | 171 | WP_043906975.1 | NinE family protein | - |
| PGD48_RS09390 () | 1908429..1909067 | + | 639 | WP_043906733.1 | recombination protein NinG | - |
| PGD48_RS09395 () | 1909064..1909705 | + | 642 | WP_043906734.1 | HNH endonuclease signature motif containing protein | - |
| PGD48_RS09400 () | 1909702..1909842 | + | 141 | WP_040218297.1 | YlcG family protein | - |
| PGD48_RS09405 () | 1909839..1910528 | + | 690 | WP_043906735.1 | bacteriophage antitermination protein Q | - |
| PGD48_RS09410 () | 1911272..1911586 | + | 315 | WP_029884058.1 | hypothetical protein | - |
| PGD48_RS09415 () | 1911589..1912092 | + | 504 | WP_043906736.1 | lysozyme | - |
| PGD48_RS09420 () | 1912089..1912466 | + | 378 | WP_043906737.1 | hypothetical protein | - |
| PGD48_RS09425 () | 1912366..1912632 | + | 267 | WP_071887736.1 | Rz1 lytic protein | - |
| PGD48_RS09430 () | 1912998..1913600 | + | 603 | WP_043906738.1 | hypothetical protein | - |
| PGD48_RS09435 () | 1913600..1915072 | + | 1473 | WP_043906739.1 | terminase | - |
| PGD48_RS09440 () | 1915085..1916548 | + | 1464 | WP_043906740.1 | DUF1073 domain-containing protein | - |
| PGD48_RS09445 () | 1916481..1917482 | + | 1002 | WP_061403453.1 | phage minor head protein | - |
| PGD48_RS09450 () | 1917475..1917675 | - | 201 | WP_023339708.1 | hypothetical protein | - |
| PGD48_RS09455 () | 1917753..1919108 | + | 1356 | WP_043906742.1 | DUF2213 domain-containing protein | - |
| PGD48_RS09460 () | 1919108..1919569 | + | 462 | WP_016529582.1 | hypothetical protein | - |
| PGD48_RS09465 () | 1919566..1920621 | + | 1056 | WP_040027496.1 | DUF6260 family protein | - |
| PGD48_RS09470 () | 1920654..1920893 | + | 240 | WP_029884066.1 | hypothetical protein | - |
| PGD48_RS09475 () | 1920896..1921276 | + | 381 | WP_004178849.1 | hypothetical protein | - |
| PGD48_RS09480 () | 1921449..1921811 | + | 363 | WP_043906744.1 | hypothetical protein | - |
| PGD48_RS09485 () | 1921814..1922182 | + | 369 | WP_043906745.1 | hypothetical protein | - |
| PGD48_RS09490 () | 1922179..1922562 | + | 384 | WP_043906746.1 | hypothetical protein | - |
| PGD48_RS09495 () | 1922565..1922786 | + | 222 | WP_043906747.1 | hypothetical protein | - |
| PGD48_RS09500 () | 1922846..1923610 | + | 765 | WP_043906748.1 | immunoglobulin domain-containing protein | - |
| PGD48_RS09505 () | 1923679..1924392 | + | 714 | WP_043906749.1 | DUF6246 family protein | - |
| PGD48_RS09510 () | 1924609..1925160 | + | 552 | WP_043906750.1 | KilA-N domain-containing protein | - |
| PGD48_RS09515 () | 1925519..1925992 | - | 474 | WP_043906751.1 | hypothetical protein | - |
| PGD48_RS09520 () | 1926133..1926822 | + | 690 | WP_223291272.1 | hypothetical protein | - |
| PGD48_RS09525 () | 1926894..1930157 | + | 3264 | WP_043906752.1 | tape measure protein | - |
| PGD48_RS09530 () | 1930200..1930676 | + | 477 | WP_023342746.1 | hypothetical protein | - |
| PGD48_RS09535 () | 1930676..1931146 | + | 471 | WP_043906753.1 | hypothetical protein | - |
| PGD48_RS09540 () | 1931143..1931538 | + | 396 | WP_043906754.1 | NlpC/P60 family protein | - |
| PGD48_RS09545 () | 1931525..1934002 | + | 2478 | WP_043906755.1 | MoaD/ThiS family protein | - |
| PGD48_RS09550 () | 1934089..1936272 | + | 2184 | WP_043906756.1 | hypothetical protein | - |
| PGD48_RS09555 () | 1936285..1937019 | + | 735 | WP_043906757.1 | hypothetical protein | - |
| PGD48_RS09560 () | 1937031..1937360 | - | 330 | WP_071887730.1 | hypothetical protein | - |
| PGD48_RS09565 () | 1937397..1937726 | - | 330 | WP_004194556.1 | hypothetical protein | - |
| PGD48_RS09570 () | 1938428..1939915 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| PGD48_RS09575 () | 1939993..1940232 | + | 240 | WP_043906812.1 | hypothetical protein | - |
| PGD48_RS09580 () | 1940232..1940549 | + | 318 | WP_043906811.1 | hypothetical protein | - |
| PGD48_RS09585 () | 1940854..1940949 | - | 96 | Protein_1875 | hypothetical protein | - |
| PGD48_RS09590 () | 1940946..1941512 | - | 567 | WP_004145564.1 | hydrolase | - |
| PGD48_RS09595 () | 1941780..1943567 | + | 1788 | WP_043906810.1 | aspartate--tRNA ligase | - |
| PGD48_RS09600 () | 1943569..1944012 | + | 444 | WP_004180439.1 | dihydroneopterin triphosphate diphosphatase | - |
| PGD48_RS09605 () | 1944040..1944780 | + | 741 | WP_002911459.1 | putative transcriptional regulatory protein YebC | VF |
| PGD48_RS09610 () | 1944815..1945336 | + | 522 | WP_002911456.1 | crossover junction endodeoxyribonuclease RuvC | - |
| PGD48_RS09615 () | 1945416..1946027 | + | 612 | WP_002911454.1 | Holliday junction branch migration protein RuvA | - |
| PGD48_RS09620 () | 1946036..1947046 | + | 1011 | WP_004148860.1 | Holliday junction branch migration DNA helicase RuvB | - |
| PGD48_RS09625 () | 1947110..1947895 | - | 786 | WP_004180438.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| PGD48_RS09630 () | 1947895..1948614 | - | 720 | WP_004197828.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| PGD48_RS09635 () | 1948726..1949670 | + | 945 | WP_004180437.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| PGD48_RS09640 () | 1949686..1951005 | + | 1320 | WP_002911444.1 | murein DD-endopeptidase MepM | - |
| PGD48_RS09645 () | 1951123..1952097 | + | 975 | WP_004175421.1 | Lipid A biosynthesis myristoyltransferase | VF |
| PGD48_RS09650 () | 1952138..1953580 | - | 1443 | WP_002911440.1 | pyruvate kinase | - |
| PGD48_RS09655 () | 1953706..1954611 | - | 906 | WP_004145555.1 | MurR/RpiR family transcriptional regulator | - |
| PGD48_RS09660 () | 1954771..1954920 | + | 150 | WP_004145554.1 | hypothetical protein | - |
| PGD48_RS09665 () | 1954931..1956406 | + | 1476 | WP_002911427.1 | glucose-6-phosphate dehydrogenase | - |
| PGD48_RS09670 () | 1956629..1958440 | + | 1812 | WP_004180436.1 | phosphogluconate dehydratase | - |
| PGD48_RS09675 () | 1958479..1959120 | + | 642 | WP_002911423.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| PGD48_RS09680 () | 1959178..1960356 | - | 1179 | WP_004180435.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| PGD48_RS09685 () | 1960501..1960848 | + | 348 | WP_004175424.1 | YebG family protein | - |
| PGD48_RS09690 () | 1960988..1961647 | + | 660 | WP_004180434.1 | tellurite resistance TerB family protein | - |
| PGD48_RS09695 () | 1961768..1963828 | + | 2061 | WP_004151449.1 | oligopeptidase B | - |
| PGD48_RS09700 () | 1963832..1964491 | - | 660 | WP_043906809.1 | exodeoxyribonuclease X | - |
| PGD48_RS09705 () | 1964570..1964800 | - | 231 | WP_002911406.1 | DNA polymerase III subunit theta | - |
| PGD48_RS09710 () | 1964913..1965287 | + | 375 | WP_004151448.1 | CopC domain-containing protein YobA | - |
| PGD48_RS09715 () | 1965291..1966160 | + | 870 | WP_004151447.1 | copper homeostasis membrane protein CopD | - |
| PGD48_RS09720 () | 1966177..1966515 | + | 339 | WP_002911404.1 | YebY family protein | - |
| - | 1966638..1966783 | - | 146 | - | - | Antitoxin Detail |
| - | 1966674..1966776 | + | 103 | - | - | Toxin Detail |
| PGD48_RS09725 () | 1967152..1967295 | - | 144 | WP_002911398.1 | Ecr family regulatory small membrane protein | - |
| PGD48_RS09730 () | 1967400..1968368 | - | 969 | WP_004151446.1 | VirK/YbjX family protein | - |
| PGD48_RS09735 () | 1968525..1969178 | + | 654 | WP_004180432.1 | protein-serine/threonine phosphatase | - |
| PGD48_RS09740 () | 1969175..1969366 | - | 192 | WP_002911395.1 | YebW family protein | - |
| PGD48_RS09745 () | 1969464..1969703 | - | 240 | WP_002911393.1 | YebV family protein | - |
| PGD48_RS09750 () | 1969819..1971252 | - | 1434 | WP_004148845.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| PGD48_RS09755 () | 1971376..1974009 | - | 2634 | WP_002911388.1 | Intermembrane transport protein YebT | VF |
| PGD48_RS09760 () | 1973978..1975261 | - | 1284 | WP_002911387.1 | membrane integrity lipid transport subunit YebS | - |
| PGD48_RS09765 () | 1975394..1975907 | + | 514 | Protein_1911 | GAF domain-containing protein | - |
| PGD48_RS09770 () | 1975989..1976666 | + | 678 | WP_002911385.1 | RNA chaperone ProQ | - |
| PGD48_RS09775 () | 1976686..1978734 | + | 2049 | WP_004145536.1 | carboxy terminal-processing peptidase | - |
| PGD48_RS09780 () | 1978970..1979854 | + | 885 | WP_002911381.1 | protease HtpX | - |
| PGD48_RS09785 () | 1979920..1981289 | - | 1370 | Protein_1915 | MFS transporter | - |
| PGD48_RS09790 () | 1981467..1982258 | + | 792 | WP_002911378.1 | DNA-binding transcriptional regulator KdgR | - |
| PGD48_RS09795 () | 1982315..1982554 | - | 240 | WP_004145533.1 | YobH family protein | - |
| PGD48_RS09800 () | 1982714..1982857 | + | 144 | WP_002911375.1 | PhoP/PhoQ regulator MgrB | - |
| PGD48_RS09805 () | 1982932..1983222 | + | 291 | WP_002911374.1 | YebO family protein | - |
| PGD48_RS09810 () | 1983813..1983884 | + | 72 | Protein_1920 | DUF2627 domain-containing protein | - |
| PGD48_RS09815 () | 1983970..1984179 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|