MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 48972 bp
Accession: NZ_CP115689 Location: 1655942..1704913 Organism: Enterobacter hormaechei strain 2020CK-00204 Replicon: chromosome
Accession: NZ_CP115689 Location: 1655942..1704913 Organism: Enterobacter hormaechei strain 2020CK-00204 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PF325_RS07875 (PF325_07875) | 1651597..1653255 | + | 1659 | WP_017693708.1 | ATP-dependent endonuclease | - |
| PF325_RS07880 (PF325_07880) | 1653252..1654208 | - | 957 | WP_032671228.1 | VirK/YbjX family protein | - |
| PF325_RS07885 (PF325_07885) | 1654368..1655483 | + | 1116 | WP_017384842.1 | macrolide transporter subunit MacA | - |
| PF325_RS07890 (PF325_07890) | 1655480..1657420 | + | 1941 | WP_015570984.1 | macrolide ABC transporter ATP-binding protein/permease MacB | - |
| PF325_RS07895 (PF325_07895) | 1657502..1657723 | - | 222 | WP_006809408.1 | cold shock-like protein CspD | - |
| PF325_RS07900 (PF325_07900) | 1657991..1658311 | + | 321 | WP_006174393.1 | ATP-dependent Clp protease adapter ClpS | - |
| PF325_RS07905 (PF325_07905) | 1658339..1660618 | + | 2280 | WP_006809407.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VF |
| PF325_RS07910 (PF325_07910) | 1661031..1661471 | + | 441 | WP_271040651.1 | hypothetical protein | - |
| PF325_RS07915 (PF325_07915) | 1662660..1663133 | + | 474 | Protein_1536 | type I-F CRISPR-associated endonuclease Cas1f | - |
| PF325_RS07920 (PF325_07920) | 1663132..1663578 | + | 447 | Protein_1537 | type I-F CRISPR-associated endoribonuclease Cas6/Csy4 | - |
| PF325_RS07925 (PF325_07925) | 1663601..1664074 | - | 474 | WP_252051936.1 | RES domain-containing protein | Toxin Detail |
| PF325_RS07930 (PF325_07930) | 1664071..1664514 | - | 444 | WP_023296216.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| PF325_RS07940 (PF325_07940) | 1667680..1667898 | - | 219 | WP_002211347.1 | translation initiation factor IF-1 | - |
| PF325_RS07945 (PF325_07945) | 1668183..1668887 | - | 705 | WP_232959876.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| PF325_RS07950 (PF325_07950) | 1668933..1670654 | - | 1722 | WP_252051934.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
| PF325_RS07955 (PF325_07955) | 1670654..1672420 | - | 1767 | WP_015570980.1 | cysteine/glutathione ABC transporter permease/ATP-binding protein CydD | - |
| PF325_RS07960 (PF325_07960) | 1672535..1673503 | - | 969 | WP_003858303.1 | thioredoxin-disulfide reductase | - |
| PF325_RS07965 (PF325_07965) | 1674047..1674541 | + | 495 | WP_000228469.1 | leucine-responsive transcriptional regulator Lrp | - |
| PF325_RS07970 (PF325_07970) | 1674677..1678345 | + | 3669 | WP_271040652.1 | hypothetical protein | VF |
| PF325_RS07975 (PF325_07975) | 1678473..1679087 | + | 615 | WP_003858270.1 | outer membrane lipoprotein chaperone LolA | - |
| PF325_RS07980 (PF325_07980) | 1679097..1680440 | + | 1344 | WP_023296220.1 | replication-associated recombination protein RarA | - |
| PF325_RS07985 (PF325_07985) | 1680533..1681825 | + | 1293 | WP_003858266.1 | serine--tRNA ligase | - |
| PF325_RS07990 (PF325_07990) | 1682037..1684481 | + | 2445 | WP_126499015.1 | dimethylsulfoxide reductase subunit A | - |
| PF325_RS07995 (PF325_07995) | 1684492..1685109 | + | 618 | WP_017384835.1 | dimethylsulfoxide reductase subunit B | - |
| PF325_RS08000 (PF325_08000) | 1685111..1685974 | + | 864 | WP_017693703.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| PF325_RS08005 (PF325_08005) | 1686250..1687398 | + | 1149 | WP_003858254.1 | MFS transporter | - |
| PF325_RS08010 (PF325_08010) | 1687521..1688042 | + | 522 | WP_017384833.1 | anti-virulence regulator CigR family protein | - |
| PF325_RS08015 (PF325_08015) | 1688079..1688819 | - | 741 | WP_003858250.1 | pyruvate formate lyase 1-activating protein | - |
| PF325_RS08020 (PF325_08020) | 1689023..1691305 | - | 2283 | WP_003858247.1 | formate C-acetyltransferase | - |
| PF325_RS08025 (PF325_08025) | 1691357..1692214 | - | 858 | WP_017384832.1 | formate transporter FocA | - |
| PF325_RS08030 (PF325_08030) | 1692620..1694380 | - | 1761 | WP_023303388.1 | 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO | - |
| PF325_RS08035 (PF325_08035) | 1694508..1695200 | + | 693 | WP_017384830.1 | DUF421 domain-containing protein | - |
| PF325_RS08040 (PF325_08040) | 1695363..1696451 | + | 1089 | WP_017384829.1 | 3-phosphoserine/phosphohydroxythreonine transaminase | - |
| PF325_RS08045 (PF325_08045) | 1696520..1697803 | + | 1284 | WP_015570969.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| PF325_RS08050 (PF325_08050) | 1697989..1698672 | + | 684 | WP_015570968.1 | (d)CMP kinase | - |
| PF325_RS08055 (PF325_08055) | 1698784..1700457 | + | 1674 | WP_003858235.1 | 30S ribosomal protein S1 | - |
| PF325_RS08060 (PF325_08060) | 1700628..1700915 | + | 288 | WP_003858233.1 | integration host factor subunit beta | - |
| PF325_RS08065 (PF325_08065) | 1701128..1703392 | + | 2265 | WP_271040653.1 | ComEC family protein | - |
| PF325_RS08070 (PF325_08070) | 1703429..1705177 | + | 1749 | WP_032103950.1 | lipid A ABC transporter ATP-binding protein/permease MsbA | - |
| PF325_RS08075 (PF325_08075) | 1705174..1706151 | + | 978 | WP_015570966.1 | tetraacyldisaccharide 4'-kinase | - |
| PF325_RS08080 (PF325_08080) | 1706195..1707424 | + | 1230 | WP_271040654.1 | winged helix-turn-helix domain-containing protein | - |
| PF325_RS08085 (PF325_08085) | 1707470..1707652 | + | 183 | WP_003858220.1 | protein YcaR | - |
| PF325_RS08090 (PF325_08090) | 1707649..1708395 | + | 747 | WP_015570964.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| PF325_RS08095 (PF325_08095) | 1708538..1709431 | + | 894 | WP_003858216.1 | YcbJ family phosphotransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|