MGE detailed information
MGE type: Genomic_island MGE length: 27735 bp
Accession: NZ_CP115551 Location: 872311..900045 Organism: Salmonella enterica subsp. enterica serovar Bispebjerg strain 20SAL-1342-3 Replicon: chromosome
Accession: NZ_CP115551 Location: 872311..900045 Organism: Salmonella enterica subsp. enterica serovar Bispebjerg strain 20SAL-1342-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PEE20_RS04260 (867757) | 867757..868855 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| PEE20_RS04265 (868865) | 868865..870382 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| PEE20_RS04270 (870458) | 870458..871003 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PEE20_RS04275 (871268) | 871268..872026 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| PEE20_RS04285 (872311) | 872311..873117 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| PEE20_RS04290 (873392) | 873392..873643 | - | 252 | WP_001540858.1 | hypothetical protein | - |
| PEE20_RS04295 (873852) | 873852..874079 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| PEE20_RS04300 (874079) | 874079..874477 | + | 399 | WP_151117435.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PEE20_RS04305 (875288) | 875288..875824 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| PEE20_RS04310 (875871) | 875871..876503 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| PEE20_RS04315 (877222) | 877222..877809 | + | 588 | WP_270805634.1 | putative fimbrial-like protein YbgD | VF |
| PEE20_RS04320 (877929) | 877929..880418 | + | 2490 | WP_270805635.1 | Outer membrane usher protein PapC | VF |
| PEE20_RS04325 (880459) | 880459..881202 | + | 744 | WP_000798505.1 | Chaperone protein PapD | VF |
| PEE20_RS04330 (881199) | 881199..882269 | + | 1071 | WP_270805636.1 | adhesion protein | - |
| PEE20_RS04335 (882376) | 882376..882882 | + | 507 | WP_000093331.1 | CaiF/GrlA family transcriptional regulator | - |
| PEE20_RS04340 (882869) | 882869..883627 | + | 759 | WP_000134797.1 | transcriptional regulator | - |
| PEE20_RS04345 (883832) | 883832..884680 | - | 849 | WP_270805637.1 | nickel/cobalt efflux protein RcnA | - |
| PEE20_RS04350 (884803) | 884803..885075 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| PEE20_RS04355 (885106) | 885106..886335 | - | 1230 | WP_000036837.1 | amino acid permease | - |
| PEE20_RS04360 (886477) | 886477..886932 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| PEE20_RS04365 (887036) | 887036..887899 | + | 864 | WP_001270779.1 | LysR family transcriptional regulator | - |
| PEE20_RS04370 (888022) | 888022..889200 | + | 1179 | WP_000665983.1 | acetyl-CoA C-acetyltransferase | - |
| PEE20_RS04375 (889629) | 889629..890465 | + | 837 | WP_000383270.1 | 5-dehydro-4-deoxy-D-glucuronate isomerase | - |
| PEE20_RS04380 (890522) | 890522..891283 | + | 762 | WP_000602490.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| PEE20_RS04385 (891373) | 891373..891555 | + | 183 | WP_000431187.1 | hypothetical protein | - |
| PEE20_RS04390 (891512) | 891512..891970 | + | 459 | WP_000502121.1 | IS200-IS605 family transposase IS200F | Transposase |
| PEE20_RS04395 (892348) | 892348..893763 | + | 1416 | WP_000253635.1 | Arabinose-proton symporter | VF |
| PEE20_RS04400 (893876) | 893876..894583 | + | 708 | WP_000848629.1 | aspartate/glutamate racemase | - |
| PEE20_RS04405 (894555) | 894555..895490 | - | 936 | WP_000741798.1 | LysR family transcriptional regulator | - |
| PEE20_RS04410 (895608) | 895608..896870 | + | 1263 | WP_151117421.1 | diaminopimelate decarboxylase | - |
| PEE20_RS04415 (896896) | 896896..897903 | - | 1008 | Protein_865 | LacI family DNA-binding transcriptional regulator | - |
| PEE20_RS04420 (897914) | 897914..898942 | - | 1029 | WP_000201030.1 | HTH-type transcriptional regulator GalR | - |
| PEE20_RS04425 (899150) | 899150..899377 | + | 228 | WP_071525129.1 | hypothetical protein | - |
| PEE20_RS04430 (899448) | 899448..899630 | + | 183 | WP_000431187.1 | hypothetical protein | - |
| PEE20_RS04435 (899587) | 899587..900045 | + | 459 | WP_000502121.1 | IS200-IS605 family transposase IS200F | Transposase |
| PEE20_RS04440 (900245) | 900245..902404 | + | 2160 | WP_000896101.1 | bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase | - |
| PEE20_RS04445 (902397) | 902397..903599 | + | 1203 | WP_151117417.1 | lysophospholipid transporter LplT | - |
| PEE20_RS04450 (903686) | 903686..904726 | - | 1041 | WP_023201367.1 | NADP(H)-dependent aldo-keto reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|