NZ_CP1151831684645..1751782

MGE detailed information

MGE type: Prophage        MGE length: 67138 bp
Accession: NZ_CP115183        Location: 1684645..1751782         Organism: Clostridioides difficile R20291       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
O9S30_RS07850 (O9S30_07850) 1679750..1680511 + 762 WP_009889424.1 SprT family zinc-dependent metalloprotease -
O9S30_RS07855 (O9S30_07855) 1681042..1681281 + 240 WP_003429800.1 ACT domain-containing protein -
O9S30_RS07860 (O9S30_07860) 1681500..1682546 + 1047 WP_225532668.1 ketol-acid reductoisomerase -
O9S30_RS07865 (O9S30_07865) 1682599..1684287 + 1689 WP_009888799.1 biosynthetic-type acetolactate synthase large subunit -
O9S30_RS07870 (O9S30_07870) 1684645..1685775 - 1131 WP_003429803.1 site-specific integrase -
O9S30_RS07875 (O9S30_07875) 1685854..1686561 - 708 WP_009888800.1 HIRAN domain-containing protein -
O9S30_RS07880 (O9S30_07880) 1686574..1687443 - 870 WP_009888801.1 HipA domain-containing protein -
O9S30_RS07885 (O9S30_07885) 1688063..1688569 - 507 WP_003429804.1 ImmA/IrrE family metallo-endopeptidase -
O9S30_RS07890 (O9S30_07890) 1688645..1689193 - 549 WP_009893126.1 helix-turn-helix transcriptional regulator -
O9S30_RS07895 (O9S30_07895) 1689205..1689546 - 342 WP_009888806.1 XRE family transcriptional regulator -
O9S30_RS07900 (O9S30_07900) 1689723..1689926 + 204 WP_009893129.1 helix-turn-helix domain-containing protein -
O9S30_RS07905 (O9S30_07905) 1689974..1690783 + 810 WP_009888810.1 phage antirepressor -
O9S30_RS07910 (O9S30_07910) 1690830..1691039 + 210 WP_009888812.1 hypothetical protein -
O9S30_RS07915 (O9S30_07915) 1691049..1691423 - 375 WP_003433505.1 DUF6173 family protein -
O9S30_RS07920 (O9S30_07920) 1691526..1691696 + 171 WP_234704199.1 helix-turn-helix transcriptional regulator -
O9S30_RS07925 (O9S30_07925) 1691727..1692119 + 393 WP_009888815.1 helix-turn-helix domain-containing protein -
O9S30_RS07930 (O9S30_07930) 1692100..1692249 + 150 WP_003429817.1 hypothetical protein -
O9S30_RS07935 (O9S30_07935) 1692320..1692757 + 438 WP_003433513.1 hypothetical protein -
O9S30_RS07940 (O9S30_07940) 1692769..1693935 + 1167 WP_009888818.1 DUF2800 domain-containing protein -
O9S30_RS07945 (O9S30_07945) 1693950..1694285 + 336 WP_009888819.1 hypothetical protein -
O9S30_RS07950 (O9S30_07950) 1694338..1694910 + 573 WP_003429822.1 sigma factor -
O9S30_RS07955 (O9S30_07955) 1694933..1695505 + 573 WP_003433516.1 DUF2815 family protein -
O9S30_RS07960 (O9S30_07960) 1695505..1697463 + 1959 WP_009888821.1 DNA polymerase -
O9S30_RS07965 (O9S30_07965) 1697475..1699892 + 2418 WP_009888822.1 virulence-associated E family protein -
O9S30_RS07970 (O9S30_07970) 1700174..1700500 + 327 WP_003433522.1 VRR-NUC domain-containing protein -
O9S30_RS07975 (O9S30_07975) 1700449..1701819 + 1371 WP_009888823.1 DEAD/DEAH box helicase -
O9S30_RS07980 (O9S30_07980) 1701843..1701980 + 138 WP_009888824.1 hypothetical protein -
O9S30_RS07985 (O9S30_07985) 1701973..1702452 + 480 WP_009888825.1 sigma factor-like helix-turn-helix DNA-binding protein -
O9S30_RS07990 (O9S30_07990) 1702735..1703187 + 453 WP_009888826.1 phage antirepressor -
O9S30_RS07995 (O9S30_07995) 1703479..1704453 + 975 WP_009888827.1 hypothetical protein -
O9S30_RS08000 (O9S30_08000) 1704474..1704983 + 510 WP_003429834.1 hypothetical protein -
O9S30_RS08005 (O9S30_08005) 1705053..1705745 + 693 WP_009888829.1 phage terminase small subunit -
O9S30_RS08010 (O9S30_08010) 1705723..1706976 + 1254 WP_012816148.1 PBSX family phage terminase large subunit -
O9S30_RS08015 (O9S30_08015) 1706982..1708424 + 1443 WP_009888831.1 phage portal protein -
O9S30_RS08020 (O9S30_08020) 1708414..1709949 + 1536 WP_009893134.1 minor capsid protein -
O9S30_RS08025 (O9S30_08025) 1709951..1710199 + 249 WP_009888832.1 hypothetical protein -
O9S30_RS08030 (O9S30_08030) 1710267..1710830 + 564 WP_009888833.1 phage scaffolding protein -
O9S30_RS08035 (O9S30_08035) 1710842..1711732 + 891 WP_009888834.1 hypothetical protein -
O9S30_RS08040 (O9S30_08040) 1711751..1711984 + 234 WP_009888835.1 hypothetical protein -
O9S30_RS08045 (O9S30_08045) 1711994..1712395 + 402 WP_009888836.1 hypothetical protein -
O9S30_RS08050 (O9S30_08050) 1712389..1712736 + 348 WP_003433540.1 hypothetical protein -
O9S30_RS08055 (O9S30_08055) 1712736..1713026 + 291 WP_009893135.1 HK97 gp10 family phage protein -
O9S30_RS08060 (O9S30_08060) 1713136..1713942 + 807 WP_009888838.1 hypothetical protein -
O9S30_RS08065 (O9S30_08065) 1714291..1714728 + 438 WP_009888839.1 hypothetical protein -
O9S30_RS08070 (O9S30_08070) 1714721..1714897 + 177 WP_009888840.1 hypothetical protein -
O9S30_RS08075 (O9S30_08075) 1714898..1716208 + 1311 WP_009893136.1 phage tail sheath family protein -
O9S30_RS08080 (O9S30_08080) 1716225..1716695 + 471 WP_009888842.1 phage tail tube protein -
O9S30_RS08085 (O9S30_08085) 1716754..1717581 + 828 WP_009888843.1 hypothetical protein -
O9S30_RS08090 (O9S30_08090) 1717653..1718093 + 441 WP_003429853.1 phage portal protein -
O9S30_RS08095 (O9S30_08095) 1718434..1718595 + 162 WP_003429855.1 hypothetical protein Toxin Detail
- 1718515..1718654 - 140 - - Antitoxin Detail
O9S30_RS08100 (O9S30_08100) 1719932..1720120 + 189 WP_003429858.1 hypothetical protein -
O9S30_RS08105 (O9S30_08105) 1720239..1721105 + 867 WP_009888845.1 BRO family protein -
O9S30_RS08110 (O9S30_08110) 1721158..1721292 + 135 WP_009888846.1 hypothetical protein -
O9S30_RS08115 (O9S30_08115) 1721970..1722497 + 528 WP_009888847.1 DUF4352 domain-containing protein -
O9S30_RS08120 (O9S30_08120) 1722635..1723402 + 768 WP_009888848.1 DUF4428 domain-containing protein -
O9S30_RS08125 (O9S30_08125) 1723468..1725840 + 2373 WP_009893138.1 tape measure protein -
O9S30_RS08130 (O9S30_08130) 1725857..1726546 + 690 WP_009888849.1 LysM peptidoglycan-binding domain-containing protein -
O9S30_RS08135 (O9S30_08135) 1726539..1728431 + 1893 WP_009893140.1 NlpC/P60 family protein -
O9S30_RS08140 (O9S30_08140) 1728445..1728705 + 261 WP_009893142.1 DUF2577 domain-containing protein -
O9S30_RS08145 (O9S30_08145) 1728710..1729129 + 420 WP_009888851.1 DUF2634 domain-containing protein -
O9S30_RS08150 (O9S30_08150) 1729130..1730179 + 1050 WP_009888852.1 baseplate J/gp47 family protein -
O9S30_RS08155 (O9S30_08155) 1730172..1730789 + 618 WP_003433579.1 YmfQ family protein -
O9S30_RS08160 (O9S30_08160) 1730801..1731826 + 1026 WP_009888853.1 phage tail protein -
O9S30_RS08165 (O9S30_08165) 1731843..1733369 + 1527 WP_009893144.1 hypothetical protein -
O9S30_RS08170 (O9S30_08170) 1733384..1733677 + 294 WP_009889429.1 hypothetical protein -
O9S30_RS08175 (O9S30_08175) 1733677..1733859 + 183 WP_009889431.1 hypothetical protein -
O9S30_RS08180 (O9S30_08180) 1733893..1734459 + 567 WP_009889434.1 hypothetical protein -
O9S30_RS08185 (O9S30_08185) 1734490..1734780 + 291 WP_009889435.1 hypothetical protein -
O9S30_RS08190 (O9S30_08190) 1734784..1735041 + 258 WP_009889440.1 phage holin family protein -
O9S30_RS08195 (O9S30_08195) 1735302..1736165 + 864 WP_003429958.1 Abi family protein -
O9S30_RS08200 (O9S30_08200) 1736244..1737056 + 813 WP_009889444.1 N-acetylmuramoyl-L-alanine amidase -
O9S30_RS08205 (O9S30_08205) 1737150..1739549 + 2400 WP_009893147.1 cell wall-binding repeat-containing protein -
O9S30_RS08210 (O9S30_08210) 1739590..1739775 - 186 WP_003433687.1 hypothetical protein -
O9S30_RS08215 (O9S30_08215) 1740004..1740132 - 129 WP_003433683.1 hypothetical protein -
O9S30_RS08220 (O9S30_08220) 1740470..1741147 + 678 WP_009889448.1 manganese catalase family protein -
O9S30_RS08225 (O9S30_08225) 1741321..1743357 + 2037 WP_009889450.1 thioredoxin domain-containing protein -
O9S30_RS08230 (O9S30_08230) 1743548..1744114 - 567 WP_009889452.1 MarR family transcriptional regulator -
O9S30_RS08235 (O9S30_08235) 1744398..1744934 + 537 WP_009889454.1 alpha/beta fold hydrolase -
O9S30_RS08240 (O9S30_08240) 1745565..1745663 + 99 Protein_1536 transposase -
O9S30_RS08245 (O9S30_08245) 1745665..1746783 + 1119 WP_211652099.1 IS200/IS605 family element RNA-guided endonuclease TnpB -
O9S30_RS08250 (O9S30_08250) 1746902..1747309 + 408 Protein_1538 alpha/beta hydrolase -
O9S30_RS08255 (O9S30_08255) 1747774..1748988 + 1215 WP_009893153.1 helix-turn-helix transcriptional regulator -
O9S30_RS08260 (O9S30_08260) 1749408..1749929 - 522 WP_009889468.1 GNAT family N-acetyltransferase -
O9S30_RS08265 (O9S30_08265) 1750285..1751082 + 798 WP_003436560.1 3D domain-containing protein -
O9S30_RS08270 (O9S30_08270) 1751192..1751782 + 591 WP_009893156.1 SGNH/GDSL hydrolase family protein -
O9S30_RS08275 (O9S30_08275) 1751848..1753545 + 1698 WP_009893157.1 phospho-sugar mutase -
O9S30_RS08280 (O9S30_08280) 1753759..1754598 + 840 WP_003436555.1 YihY/virulence factor BrkB family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance