MGE detailed information
MGE type: Genomic_island MGE length: 51320 bp
Accession: NZ_CP114801 Location: 3801908..3853227 Organism: Citrobacter sp. 21OH12SH02A-Citro Replicon: chromosome
Accession: NZ_CP114801 Location: 3801908..3853227 Organism: Citrobacter sp. 21OH12SH02A-Citro Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6D90_RS18470 (3797282) | 3797282..3797680 | + | 399 | WP_016155780.1 | hydrogenase-1 operon protein HyaE | - |
| O6D90_RS18475 (3797682) | 3797682..3798539 | + | 858 | WP_016155779.1 | hydrogenase expression/formation protein | - |
| O6D90_RS18480 (3798629) | 3798629..3800173 | + | 1545 | WP_016155778.1 | cytochrome bd-II oxidase subunit 1 | - |
| O6D90_RS18485 (3800185) | 3800185..3801321 | + | 1137 | WP_016155777.1 | cytochrome d ubiquinol oxidase subunit II | - |
| O6D90_RS18490 (3801335) | 3801335..3801424 | + | 90 | WP_016151902.1 | cytochrome bd-II oxidase subunit CbdX | - |
| O6D90_RS18495 (3801833) | 3801833..3803227 | + | 1395 | Protein_3624 | Tyrosine recombinase XerC ; Integrase | Integrase |
| O6D90_RS18500 (3804108) | 3804108..3804872 | + | 765 | WP_016246899.1 | hypothetical protein | - |
| O6D90_RS18505 (3805334) | 3805334..3805954 | + | 621 | WP_210761266.1 | inovirus Gp2 family protein | - |
| O6D90_RS18510 (3806028) | 3806028..3806522 | - | 495 | WP_006809979.1 | hypothetical protein | - |
| O6D90_RS18515 (3806557) | 3806557..3809688 | - | 3132 | WP_271143182.1 | type I restriction endonuclease subunit R | - |
| O6D90_RS18520 (3809688) | 3809688..3810863 | - | 1176 | WP_001581473.1 | DUF4268 domain-containing protein | - |
| O6D90_RS18525 (3810856) | 3810856..3812199 | - | 1344 | WP_113372773.1 | restriction endonuclease subunit S | - |
| O6D90_RS18530 (3812189) | 3812189..3813898 | - | 1710 | WP_271143183.1 | class I SAM-dependent DNA methyltransferase | - |
| O6D90_RS18535 (3814116) | 3814116..3814813 | + | 698 | WP_226856257.1 | IS1 family transposase | - |
| O6D90_RS18540 (3815340) | 3815340..3815708 | - | 369 | WP_271143324.1 | hypothetical protein | - |
| O6D90_RS18545 (3815595) | 3815595..3818810 | + | 3216 | Protein_3634 | cadherin-like domain-containing protein | - |
| O6D90_RS18550 (3820070) | 3820070..3820216 | - | 147 | WP_237430826.1 | hypothetical protein | - |
| O6D90_RS18555 (3820473) | 3820473..3828695 | + | 8223 | WP_271143320.1 | Ig-like domain-containing protein | - |
| O6D90_RS18560 (3828772) | 3828772..3830691 | + | 1920 | WP_000989158.1 | TolC family protein | - |
| O6D90_RS18565 (3830706) | 3830706..3831587 | + | 882 | WP_001548177.1 | efflux RND transporter periplasmic adaptor subunit | - |
| O6D90_RS18570 (3831584) | 3831584..3832933 | + | 1350 | WP_001548176.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| O6D90_RS18575 (3832935) | 3832935..3835067 | + | 2133 | WP_001548175.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| O6D90_RS18580 (3835446) | 3835446..3835736 | + | 291 | Protein_3641 | Tn3 family transposase | - |
| O6D90_RS18585 (3835885) | 3835885..3836865 | - | 981 | WP_271143184.1 | IS5 family transposase ISKpn26 | Transposase |
| O6D90_RS18590 (3837195) | 3837195..3837401 | - | 207 | WP_113372764.1 | AlpA family transcriptional regulator | - |
| O6D90_RS18595 (3837523) | 3837523..3838101 | - | 579 | WP_113372765.1 | inovirus-type Gp2 protein | - |
| O6D90_RS18600 (3838389) | 3838389..3839150 | + | 762 | WP_127790460.1 | hypothetical protein | - |
| O6D90_RS18605 (3839272) | 3839272..3840135 | + | 864 | WP_113372766.1 | GTPase family protein | - |
| O6D90_RS18610 (3840224) | 3840224..3841045 | + | 822 | WP_113372767.1 | DUF932 domain-containing protein | - |
| O6D90_RS18615 (3841069) | 3841069..3841308 | + | 240 | WP_007869725.1 | DUF905 domain-containing protein | - |
| O6D90_RS18620 (3841412) | 3841412..3841870 | + | 459 | WP_113372854.1 | antirestriction protein | - |
| O6D90_RS18625 (3841886) | 3841886..3842362 | + | 477 | WP_000811693.1 | RadC family protein | - |
| O6D90_RS18630 (3842371) | 3842371..3842592 | + | 222 | WP_063841895.1 | DUF987 domain-containing protein | - |
| O6D90_RS18635 (3842611) | 3842611..3842928 | + | 318 | WP_113372912.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| O6D90_RS18640 (3842949) | 3842949..3843290 | + | 342 | WP_016246873.1 | TA system toxin CbtA family protein | Toxin Detail |
| O6D90_RS18650 (3843913) | 3843913..3844377 | - | 465 | WP_016155776.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| O6D90_RS18655 (3844571) | 3844571..3846019 | - | 1449 | WP_016155775.1 | hypothetical protein | VF |
| O6D90_RS18660 (3846362) | 3846362..3846835 | - | 474 | WP_016155774.1 | hypothetical protein | - |
| O6D90_RS18665 (3846810) | 3846810..3847541 | - | 732 | WP_016155773.1 | winged helix-turn-helix domain-containing protein | - |
| O6D90_RS18670 (3847686) | 3847686..3848381 | - | 696 | WP_016155772.1 | putative fimbrial chaperone EcpE | VF |
| O6D90_RS18675 (3848378) | 3848378..3849994 | - | 1617 | WP_016155771.1 | Fimbria adhesin EcpD | VF |
| O6D90_RS18680 (3849999) | 3849999..3852491 | - | 2493 | WP_016155770.1 | putative outer membrane usher protein EcpC | VF |
| O6D90_RS18685 (3852550) | 3852550..3853227 | - | 678 | WP_016155769.1 | putative fimbrial chaperone EcpB | VF |
| O6D90_RS18690 (3853281) | 3853281..3853868 | - | 588 | WP_016151870.1 | common pilus major fimbrillin subunit EcpA | - |
| O6D90_RS18695 (3854464) | 3854464..3855183 | - | 720 | WP_016155768.1 | Crp/Fnr family transcriptional regulator | - |
| O6D90_RS18700 (3855464) | 3855464..3856717 | - | 1254 | WP_016151868.1 | glutamate-5-semialdehyde dehydrogenase | - |
| O6D90_RS18705 (3856729) | 3856729..3857832 | - | 1104 | WP_003031373.1 | glutamate 5-kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|