NZ_CP1147914260006..4418757

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 158752 bp
Accession: NZ_CP114791        Location: 4260006..4418757         Organism: Sphingomonas sp. NIBR02145       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
O3305_RS19470 (O3305_19470) 4255321..4256448 + 1128 WP_269574004.1 hypothetical protein -
O3305_RS19475 (O3305_19475) 4256445..4258019 + 1575 WP_269574005.1 serine hydrolase -
O3305_RS19480 (O3305_19480) 4258016..4259209 + 1194 WP_269574006.1 dipeptidase -
O3305_RS19490 (O3305_19490) 4260069..4261334 + 1266 WP_269574007.1 Prophage integrase IntA ; Integrase Integrase
O3305_RS19495 (O3305_19495) 4261825..4263897 + 2073 WP_269574008.1 Catalase C VF
O3305_RS19500 (O3305_19500) 4263993..4264502 - 510 WP_269574009.1 hemerythrin domain-containing protein -
O3305_RS19505 (O3305_19505) 4264662..4265924 - 1263 WP_269574010.1 cation:proton antiporter -
O3305_RS19510 (O3305_19510) 4265945..4267036 - 1092 WP_269574011.1 PHB depolymerase family esterase -
O3305_RS19515 (O3305_19515) 4267445..4267573 + 129 WP_269574012.1 hypothetical protein -
O3305_RS19520 (O3305_19520) 4267614..4267886 + 273 WP_269574013.1 hypothetical protein -
O3305_RS19525 (O3305_19525) 4268055..4268261 + 207 WP_269574014.1 cold-shock protein -
O3305_RS19530 (O3305_19530) 4268333..4269238 + 906 WP_269574015.1 transglutaminase family protein -
O3305_RS19535 (O3305_19535) 4269238..4269408 + 171 WP_184000639.1 hypothetical protein -
O3305_RS19540 (O3305_19540) 4269436..4269690 - 255 WP_184000638.1 hypothetical protein -
O3305_RS19545 (O3305_19545) 4270005..4270364 + 360 WP_269574016.1 hypothetical protein -
O3305_RS19550 (O3305_19550) 4270564..4270785 + 222 WP_269574017.1 hypothetical protein -
O3305_RS19555 (O3305_19555) 4270940..4271179 + 240 WP_269574018.1 hypothetical protein -
O3305_RS19560 (O3305_19560) 4271424..4271624 - 201 WP_269574019.1 helix-turn-helix domain-containing protein -
O3305_RS19565 (O3305_19565) 4271621..4271833 - 213 WP_269574020.1 DUF2274 domain-containing protein -
O3305_RS19570 (O3305_19570) 4271835..4273058 - 1224 WP_269574021.1 hypothetical protein VF
O3305_RS19575 (O3305_19575) 4273055..4274005 - 951 WP_269574022.1 P-type conjugative transfer protein TrbG -
O3305_RS19580 (O3305_19580) 4274002..4274808 - 807 WP_269574023.1 conjugal transfer protein TrbF -
O3305_RS19585 (O3305_19585) 4274808..4276112 - 1305 WP_269574024.1 P-type conjugative transfer protein TrbL -
O3305_RS19590 (O3305_19590) 4276227..4276967 - 741 WP_269574025.1 P-type conjugative transfer protein TrbJ -
O3305_RS19595 (O3305_19595) 4276973..4279411 - 2439 WP_269574026.1 conjugal transfer protein TrbE -
O3305_RS19600 (O3305_19600) 4279405..4279677 - 273 WP_269574027.1 VirB3 family type IV secretion system protein -
O3305_RS19605 (O3305_19605) 4279674..4280000 - 327 WP_269574028.1 TrbC/VirB2 family protein -
O3305_RS19610 (O3305_19610) 4280003..4280989 - 987 WP_269574029.1 Type IV secretion system protein VirB11 VF
O3305_RS19615 (O3305_19615) 4280986..4281387 - 402 WP_269574030.1 CopG family transcriptional regulator -
O3305_RS19620 (O3305_19620) 4281389..4283410 - 2022 WP_269574031.1 Conjugal transfer protein TraG VF
O3305_RS19625 (O3305_19625) 4283735..4285399 - 1665 WP_269574032.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein -
O3305_RS19630 (O3305_19630) 4285549..4287633 + 2085 WP_269574033.1 FecR family protein -
O3305_RS19635 (O3305_19635) 4287706..4290018 + 2313 WP_269574034.1 hypothetical protein VF
O3305_RS19640 (O3305_19640) 4290313..4291422 - 1110 WP_269574035.1 hypothetical protein -
O3305_RS19645 (O3305_19645) 4291465..4291803 - 339 WP_269574036.1 hypothetical protein -
O3305_RS19650 (O3305_19650) 4291856..4292788 - 933 WP_269574037.1 tetratricopeptide repeat protein -
O3305_RS19655 (O3305_19655) 4292991..4293254 - 264 WP_269574038.1 hypothetical protein -
O3305_RS19660 (O3305_19660) 4293383..4295293 - 1911 WP_269574039.1 alpha/beta fold hydrolase -
O3305_RS19665 (O3305_19665) 4295668..4295913 - 246 WP_269574040.1 hypothetical protein -
O3305_RS19670 (O3305_19670) 4296018..4297979 - 1962 WP_269574041.1 relaxase/mobilization nuclease RlxS -
O3305_RS19675 (O3305_19675) 4298235..4298591 - 357 WP_269574042.1 hypothetical protein -
O3305_RS19680 (O3305_19680) 4298812..4299408 - 597 WP_269574043.1 lytic transglycosylase domain-containing protein -
O3305_RS19685 (O3305_19685) 4299396..4299974 - 579 WP_269574044.1 S26 family signal peptidase -
O3305_RS19690 (O3305_19690) 4299971..4300198 - 228 WP_269574045.1 helix-turn-helix domain-containing protein -
O3305_RS19695 (O3305_19695) 4300341..4300640 - 300 WP_269574046.1 DUF736 domain-containing protein -
O3305_RS19700 (O3305_19700) 4301023..4301238 + 216 WP_269574047.1 hypothetical protein -
O3305_RS19705 (O3305_19705) 4301225..4301620 + 396 WP_269574048.1 thermonuclease family protein -
O3305_RS19710 (O3305_19710) 4301655..4303424 - 1770 WP_269574049.1 ParB N-terminal domain-containing protein -
O3305_RS19715 (O3305_19715) 4303527..4303926 - 400 Protein_3887 DUF2958 domain-containing protein -
O3305_RS19720 (O3305_19720) 4303923..4304864 - 942 WP_269574050.1 zincin-like metallopeptidase domain-containing protein -
O3305_RS19725 (O3305_19725) 4305585..4306517 + 933 WP_269574051.1 hypothetical protein VF
O3305_RS19730 (O3305_19730) 4306796..4317802 + 11007 WP_269574052.1 hypothetical protein VF
O3305_RS19735 (O3305_19735) 4317983..4318174 - 192 WP_269574053.1 hypothetical protein -
O3305_RS19740 (O3305_19740) 4318351..4318616 - 266 Protein_3892 protein usg -
O3305_RS19745 (O3305_19745) 4318613..4318852 - 240 WP_269574054.1 hypothetical protein -
O3305_RS19750 (O3305_19750) 4319129..4319443 + 315 WP_269574055.1 co-chaperone GroES -
O3305_RS19755 (O3305_19755) 4319496..4321115 + 1620 WP_269574056.1 60 kDa chaperonin 1 VF
O3305_RS19760 (O3305_19760) 4322366..4323016 + 651 WP_269574057.1 GAF domain-containing protein -
O3305_RS19765 (O3305_19765) 4323210..4326143 - 2934 WP_269574058.1 PAS domain-containing protein -
O3305_RS19770 (O3305_19770) 4326349..4328058 - 1710 WP_269574059.1 histidine kinase famiy protein -
O3305_RS19775 (O3305_19775) 4328276..4328518 + 243 WP_269574060.1 hypothetical protein -
O3305_RS19780 (O3305_19780) 4328612..4329439 + 828 WP_269574061.1 TIGR02587 family membrane protein -
O3305_RS19785 (O3305_19785) 4329442..4329834 + 393 WP_269574062.1 hypothetical protein -
O3305_RS19790 (O3305_19790) 4330292..4331011 - 720 WP_269574063.1 hypothetical protein -
O3305_RS19795 (O3305_19795) 4331068..4332492 - 1425 WP_269574064.1 thiol-activated cytolysin family protein -
O3305_RS19800 (O3305_19800) 4332977..4333807 + 831 WP_269574065.1 hypothetical protein -
O3305_RS19805 (O3305_19805) 4333914..4334522 - 609 WP_269574066.1 DUF2285 domain-containing protein -
O3305_RS19810 (O3305_19810) 4334915..4335658 + 744 WP_269574067.1 LuxR family transcriptional regulator -
O3305_RS19815 (O3305_19815) 4335737..4336342 + 606 WP_269574068.1 4-coumaroyl-homoserine lactone synthase VF
O3305_RS19820 (O3305_19820) 4336342..4337232 + 891 WP_269574069.1 phytanoyl-CoA dioxygenase family protein -
O3305_RS19825 (O3305_19825) 4337236..4337850 + 615 WP_269574070.1 GntR family transcriptional regulator -
O3305_RS19830 (O3305_19830) 4338014..4339192 + 1179 WP_269574071.1 aminotransferase class V-fold PLP-dependent enzyme -
O3305_RS19835 (O3305_19835) 4339556..4339783 - 228 Protein_3911 nucleotidyltransferase -
O3305_RS19840 (O3305_19840) 4339862..4340077 - 216 WP_269574072.1 sigma factor-like helix-turn-helix DNA-binding protein -
O3305_RS19845 (O3305_19845) 4340491..4341030 + 540 WP_269574073.1 putative RNA polymerase sigma factor FecI VF
O3305_RS19850 (O3305_19850) 4341027..4342061 + 1035 WP_269574074.1 FecR domain-containing protein -
O3305_RS19855 (O3305_19855) 4342360..4342626 + 267 WP_269574075.1 GlsB/YeaQ/YmgE family stress response membrane protein -
O3305_RS19860 (O3305_19860) 4343032..4344384 + 1353 Protein_3916 deoxyribodipyrimidine photo-lyase -
O3305_RS19865 (O3305_19865) 4344866..4345222 + 357 WP_269574076.1 hypothetical protein -
O3305_RS19870 (O3305_19870) 4345610..4346197 + 588 WP_269574077.1 Light-activated DNA-binding protein EL222 VF
O3305_RS19875 (O3305_19875) 4346321..4348180 + 1860 WP_269574078.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
O3305_RS19880 (O3305_19880) 4348251..4349723 + 1473 WP_269574079.1 phytoene desaturase -
O3305_RS19885 (O3305_19885) 4349720..4349881 + 162 WP_269576569.1 DUF2141 domain-containing protein -
O3305_RS19890 (O3305_19890) 4350152..4351729 + 1578 WP_269574080.1 FAD/NAD(P)-binding protein -
O3305_RS19895 (O3305_19895) 4351726..4352226 + 501 WP_269574081.1 DUF1543 domain-containing protein -
O3305_RS19900 (O3305_19900) 4352289..4352468 - 180 WP_269574082.1 hypothetical protein -
O3305_RS19905 (O3305_19905) 4352734..4353321 - 588 WP_269574083.1 hypothetical protein -
O3305_RS19910 (O3305_19910) 4353437..4353724 + 288 WP_269574084.1 hypothetical protein -
O3305_RS19915 (O3305_19915) 4354033..4354161 + 129 WP_269574085.1 hypothetical protein -
O3305_RS19920 (O3305_19920) 4354226..4354879 + 654 WP_269574086.1 lasso peptide biosynthesis B2 protein -
O3305_RS19925 (O3305_19925) 4354876..4356642 + 1767 WP_269574087.1 asparagine synthetase B family protein -
O3305_RS19930 (O3305_19930) 4356671..4356796 + 126 WP_269574088.1 hypothetical protein -
O3305_RS19935 (O3305_19935) 4356856..4358964 - 2109 WP_269574089.1 Atxe2 family lasso peptide isopeptidase -
O3305_RS19940 (O3305_19940) 4358961..4361549 - 2589 WP_269574090.1 TonB-dependent receptor -
O3305_RS19945 (O3305_19945) 4361811..4362542 + 732 WP_269574091.1 damage-inducible mutagenesis protein -
O3305_RS19950 (O3305_19950) 4362463..4364019 + 1557 WP_269574092.1 DNA polymerase Y family protein -
O3305_RS19955 (O3305_19955) 4364272..4364775 + 504 WP_269574093.1 Hsp20 family protein -
O3305_RS19960 (O3305_19960) 4364840..4365070 + 231 WP_269574094.1 hypothetical protein -
O3305_RS19965 (O3305_19965) 4365072..4365281 + 210 WP_269574095.1 hypothetical protein -
O3305_RS19970 (O3305_19970) 4365370..4365609 - 240 WP_269574096.1 GlsB/YeaQ/YmgE family stress response membrane protein -
O3305_RS19975 (O3305_19975) 4365692..4366102 - 411 WP_269574097.1 low affinity iron permease family protein -
O3305_RS19980 (O3305_19980) 4366194..4366973 - 780 WP_269574098.1 transglutaminase family protein -
O3305_RS19985 (O3305_19985) 4367163..4367405 + 243 WP_269574099.1 hypothetical protein -
O3305_RS19990 (O3305_19990) 4367477..4368232 - 756 WP_269574100.1 Crp/Fnr family transcriptional regulator -
O3305_RS19995 (O3305_19995) 4368404..4368655 + 252 WP_269574101.1 hypothetical protein -
O3305_RS20000 (O3305_20000) 4368652..4369371 + 720 WP_269574102.1 Crp/Fnr family transcriptional regulator -
O3305_RS20005 (O3305_20005) 4369847..4370746 + 900 WP_269576570.1 iron-containing redox enzyme family protein -
O3305_RS20010 (O3305_20010) 4370846..4372990 + 2145 WP_269574103.1 Catalase C VF
O3305_RS20015 (O3305_20015) 4373091..4373318 - 228 WP_269574104.1 hypothetical protein -
O3305_RS20020 (O3305_20020) 4373390..4373785 - 396 WP_269574105.1 DUF3597 family protein -
O3305_RS20025 (O3305_20025) 4373915..4374490 + 576 WP_269574106.1 DUF4142 domain-containing protein -
O3305_RS20030 (O3305_20030) 4374510..4375286 + 777 WP_269574107.1 histidine phosphatase family protein -
O3305_RS20035 (O3305_20035) 4375283..4376167 + 885 WP_269574108.1 NAD(P)H-hydrate dehydratase -
O3305_RS20040 (O3305_20040) 4376255..4376413 + 159 WP_269574109.1 hypothetical protein -
O3305_RS20045 (O3305_20045) 4376556..4377047 - 492 WP_269574110.1 DUF421 domain-containing protein -
O3305_RS20050 (O3305_20050) 4377327..4379549 + 2223 WP_269574111.1 hypothetical protein -
O3305_RS20055 (O3305_20055) 4379551..4379739 - 189 WP_269574112.1 hypothetical protein -
O3305_RS20060 (O3305_20060) 4379747..4380046 - 300 WP_269574113.1 plasmid stabilization protein -
O3305_RS20065 (O3305_20065) 4380177..4380959 + 783 WP_269574114.1 SDR family oxidoreductase -
O3305_RS20070 (O3305_20070) 4380956..4382074 + 1119 WP_269574115.1 glycosidase -
O3305_RS20075 (O3305_20075) 4382102..4382302 - 201 WP_269574116.1 hypothetical protein -
O3305_RS20080 (O3305_20080) 4382536..4383042 + 507 WP_269574117.1 hemerythrin domain-containing protein -
O3305_RS20085 (O3305_20085) 4383181..4383474 + 294 WP_269574118.1 hypothetical protein -
O3305_RS20090 (O3305_20090) 4383594..4384610 + 1017 WP_269574119.1 ATP-dependent DNA ligase -
O3305_RS20095 (O3305_20095) 4384854..4385459 + 606 WP_269574120.1 SRPBCC family protein -
O3305_RS20100 (O3305_20100) 4385494..4386684 + 1191 WP_269574121.1 zinc-dependent alcohol dehydrogenase -
O3305_RS20105 (O3305_20105) 4386690..4387475 + 786 WP_269574122.1 SDR family NAD(P)-dependent oxidoreductase -
O3305_RS20110 (O3305_20110) 4387634..4390837 - 3204 WP_269574123.1 helicase-related protein -
O3305_RS20115 (O3305_20115) 4390969..4391517 - 549 WP_269574124.1 PRC-barrel domain-containing protein -
O3305_RS20120 (O3305_20120) 4391870..4393003 + 1134 WP_269576571.1 DUF2252 family protein -
O3305_RS20125 (O3305_20125) 4393124..4393435 + 312 WP_269574125.1 hypothetical protein -
O3305_RS20130 (O3305_20130) 4393597..4394013 + 417 WP_269574126.1 hypothetical protein -
O3305_RS20135 (O3305_20135) 4394243..4394638 - 396 WP_269574127.1 BLUF domain-containing protein -
O3305_RS20140 (O3305_20140) 4394828..4395031 - 204 WP_269574128.1 hypothetical protein -
O3305_RS20145 (O3305_20145) 4395295..4397199 + 1905 WP_269574129.1 Sensor histidine kinase RcsC VF
O3305_RS20150 (O3305_20150) 4397314..4400625 + 3312 WP_269574130.1 error-prone DNA polymerase -
O3305_RS20155 (O3305_20155) 4400634..4400993 - 360 WP_269574131.1 hypothetical protein -
O3305_RS20160 (O3305_20160) 4401047..4401259 - 213 WP_269574132.1 hypothetical protein -
O3305_RS20165 (O3305_20165) 4401656..4401919 + 264 WP_269574133.1 DksA/TraR family C4-type zinc finger protein -
O3305_RS20170 (O3305_20170) 4401919..4402305 + 387 WP_269574134.1 hypothetical protein -
O3305_RS20175 (O3305_20175) 4402272..4403045 - 774 WP_269574135.1 exodeoxyribonuclease III -
O3305_RS20180 (O3305_20180) 4403026..4403763 - 738 WP_269574136.1 non-homologous end-joining DNA ligase -
O3305_RS20185 (O3305_20185) 4404018..4404551 - 534 Protein_3981 ATP-dependent DNA ligase -
O3305_RS20190 (O3305_20190) 4404903..4404983 + 81 WP_269576572.1 DUF3606 domain-containing protein -
O3305_RS20195 (O3305_20195) 4405011..4405400 - 390 WP_269574137.1 hypothetical protein -
O3305_RS20200 (O3305_20200) 4405434..4405766 - 333 WP_269574138.1 SOS response-associated peptidase family protein -
O3305_RS20205 (O3305_20205) 4406005..4406631 + 627 WP_269574139.1 SOS response-associated peptidase -
O3305_RS20210 (O3305_20210) 4406724..4407149 - 426 WP_269576573.1 DUF5818 domain-containing protein -
O3305_RS20215 (O3305_20215) 4407218..4407664 - 447 WP_269574140.1 hypothetical protein -
O3305_RS20220 (O3305_20220) 4407672..4407875 - 204 WP_269574141.1 hypothetical protein -
O3305_RS20225 (O3305_20225) 4408074..4408601 + 528 WP_269574142.1 hypothetical protein VF
O3305_RS20230 (O3305_20230) 4408638..4408958 + 321 WP_269574143.1 hypothetical protein -
O3305_RS20235 (O3305_20235) 4408998..4409444 + 447 WP_269574144.1 hypothetical protein -
O3305_RS20240 (O3305_20240) 4409450..4410025 + 576 WP_269576574.1 DNA repair protein RadC -
O3305_RS20245 (O3305_20245) 4410175..4410735 - 561 WP_269574145.1 fasciclin domain-containing protein -
O3305_RS20250 (O3305_20250) 4410815..4411510 - 696 WP_269574146.1 anti-sigma factor -
O3305_RS20255 (O3305_20255) 4411503..4412066 - 564 WP_269574147.1 sigma-70 family RNA polymerase sigma factor -
O3305_RS20260 (O3305_20260) 4412147..4412611 - 465 WP_269574148.1 DoxX family protein -
O3305_RS20265 (O3305_20265) 4412672..4412950 - 279 WP_269574149.1 DUF2282 domain-containing protein -
O3305_RS20270 (O3305_20270) 4413162..4413701 + 540 WP_269574150.1 sigma-70 family RNA polymerase sigma factor -
O3305_RS20275 (O3305_20275) 4413698..4414339 + 642 WP_269574151.1 DUF1109 domain-containing protein -
O3305_RS20280 (O3305_20280) 4414423..4414695 + 273 WP_269574152.1 hypothetical protein -
O3305_RS20285 (O3305_20285) 4414760..4415590 + 831 WP_269574153.1 DUF692 domain-containing protein -
O3305_RS20290 (O3305_20290) 4415587..4416378 + 792 WP_269574154.1 DNA-binding domain-containing protein -
O3305_RS20295 (O3305_20295) 4416589..4416786 + 198 WP_269574155.1 hypothetical protein -
O3305_RS20300 (O3305_20300) 4417096..4417380 + 285 WP_269574156.1 DUF1778 domain-containing protein Antitoxin Detail
O3305_RS20305 (O3305_20305) 4417371..4417913 + 543 WP_269574157.1 GNAT family N-acetyltransferase Toxin Detail
O3305_RS20310 (O3305_20310) 4418585..4419025 - 441 WP_269574158.1 hypothetical protein -
O3305_RS20315 (O3305_20315) 4419052..4421424 - 2373 WP_269574159.1 TonB-dependent receptor -
O3305_RS20320 (O3305_20320) 4421429..4422418 - 990 WP_269574160.1 FecR domain-containing protein -
O3305_RS20325 (O3305_20325) 4422458..4422934 - 477 WP_269574161.1 RNA polymerase sigma factor -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance