MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89413 bp
Accession: NZ_CP114790 Location: 1..89413 Organism: Roseibium sp. Sym1 Replicon: plasmid unnamed4
Accession: NZ_CP114790 Location: 1..89413 Organism: Roseibium sp. Sym1 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6760_RS32935 | 174..1067 | - | 894 | WP_269586493.1 | DUF3991 and toprim domain-containing protein | - |
| O6760_RS32940 | 1446..2486 | - | 1041 | WP_209171626.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| O6760_RS32945 | 2483..3088 | - | 606 | WP_209171627.1 | DUF6088 family protein | - |
| O6760_RS32950 | 3503..4651 | - | 1149 | WP_209171628.1 | SAVED domain-containing protein | - |
| O6760_RS32955 | 4688..5179 | - | 492 | WP_209171629.1 | Mov34/MPN/PAD-1 family protein | - |
| O6760_RS32960 | 5160..6878 | - | 1719 | WP_209171630.1 | ThiF family adenylyltransferase | - |
| O6760_RS32965 | 6875..8086 | - | 1212 | WP_209171631.1 | nucleotidyltransferase | - |
| O6760_RS32970 | 8508..10379 | - | 1872 | WP_209171632.1 | hypothetical protein | - |
| O6760_RS32975 | 10435..11190 | - | 756 | WP_209171633.1 | hypothetical protein | - |
| O6760_RS32980 | 11212..12591 | - | 1380 | WP_269586494.1 | alkaline phosphatase D family protein | - |
| O6760_RS32985 | 12777..16076 | - | 3300 | WP_269586495.1 | DEAD/DEAH box helicase family protein | - |
| O6760_RS32990 | 16360..17466 | - | 1107 | WP_209171636.1 | RHE_PE00001 family protein | - |
| O6760_RS32995 | 17749..18690 | + | 942 | WP_209171664.1 | Tn3 family transposase ISPsy42 | Transposase |
| O6760_RS33000 | 18778..18987 | + | 210 | WP_209171637.1 | hypothetical protein | - |
| O6760_RS33005 | 19031..20344 | - | 1314 | WP_209171638.1 | plasmid replication protein RepC | - |
| O6760_RS33010 | 20536..21531 | - | 996 | WP_209171639.1 | plasmid partitioning protein RepB | - |
| O6760_RS33015 | 21610..22806 | - | 1197 | WP_269586496.1 | hypothetical protein | VF |
| O6760_RS33020 | 23562..24566 | + | 1005 | WP_075284019.1 | hypothetical protein | VF |
| O6760_RS33025 | 24556..24915 | + | 360 | WP_075284018.1 | TrbC/VirB2 family protein | - |
| O6760_RS33030 | 24908..25204 | + | 297 | WP_075284017.1 | conjugal transfer protein TrbD | - |
| O6760_RS33035 | 25207..27654 | + | 2448 | WP_269586497.1 | conjugal transfer protein TrbE | - |
| O6760_RS33040 | 27632..28423 | + | 792 | WP_168693808.1 | P-type conjugative transfer protein TrbJ | - |
| O6760_RS33045 | 28427..28621 | + | 195 | WP_168693807.1 | hypothetical protein | - |
| O6760_RS33050 | 28618..29775 | + | 1158 | WP_269586498.1 | P-type conjugative transfer protein TrbL | - |
| O6760_RS33055 | 29791..30453 | + | 663 | WP_209171676.1 | conjugal transfer protein TrbF | - |
| O6760_RS33060 | 30519..31316 | + | 798 | WP_269586481.1 | P-type conjugative transfer protein TrbG | - |
| O6760_RS33065 | 31319..31786 | + | 468 | WP_209171674.1 | conjugal transfer protein TrbH | - |
| O6760_RS33070 | 31799..33139 | + | 1341 | WP_209171673.1 | IncP-type conjugal transfer protein TrbI | - |
| O6760_RS33075 | 33251..33592 | - | 342 | Protein_28 | integrase core domain-containing protein | - |
| O6760_RS33080 | 33534..34846 | - | 1313 | Protein_29 | ISNCY family transposase ISRel26 | Transposase |
| O6760_RS33085 | 35130..35603 | - | 474 | WP_168693799.1 | signal peptidase II | - |
| O6760_RS33090 | 35626..36081 | - | 456 | WP_168693798.1 | DUF411 domain-containing protein | - |
| O6760_RS33095 | 36265..36891 | - | 627 | WP_168693797.1 | SCO family protein | - |
| O6760_RS33100 | 36891..37355 | - | 465 | WP_168693796.1 | copper chaperone PCu(A)C | - |
| O6760_RS33105 | 37383..38042 | - | 660 | WP_168693795.1 | thioredoxin domain-containing protein | - |
| O6760_RS33110 | 38039..38461 | - | 423 | WP_168693794.1 | disulfide bond formation protein B | - |
| O6760_RS33115 | 38466..38705 | - | 240 | WP_168693793.1 | hypothetical protein | - |
| O6760_RS33120 | 38948..39376 | + | 429 | WP_168693792.1 | IS607 family transposase ISChh1 | Transposase |
| O6760_RS33125 | 39710..40471 | + | 762 | WP_168693791.1 | transglutaminase family protein | - |
| O6760_RS33130 | 40461..41402 | + | 942 | WP_168693790.1 | cation diffusion facilitator family transporter | - |
| O6760_RS33135 | 41580..42248 | - | 669 | WP_209171670.1 | L,D-transpeptidase | - |
| O6760_RS33140 | 42483..43043 | - | 561 | WP_197923324.1 | L,D-transpeptidase | - |
| O6760_RS33145 | 43650..45833 | + | 2184 | WP_168693789.1 | heavy metal translocating P-type ATPase | - |
| O6760_RS33150 | 46184..46936 | + | 753 | WP_168693788.1 | heparan-alpha-glucosaminide N-acetyltransferase | - |
| O6760_RS33155 | 46976..47956 | - | 981 | WP_209171781.1 | murein L,D-transpeptidase family protein | - |
| O6760_RS33160 | 48764..48946 | + | 183 | WP_228933516.1 | IS1595 family transposase ISSpo8 | Transposase |
| O6760_RS33165 | 49048..49533 | + | 486 | WP_269586499.1 | IS1595 family transposase ISPepr2 | Transposase |
| O6760_RS33170 | 49608..49916 | + | 309 | WP_168693820.1 | YnfA family protein | - |
| O6760_RS33175 | 50668..51285 | + | 618 | WP_168693785.1 | transglutaminase-like cysteine peptidase | - |
| O6760_RS33180 | 51450..52181 | - | 732 | WP_269586489.1 | phosphonate ABC transporter, permease protein PhnE | - |
| O6760_RS33185 | 52193..52963 | - | 771 | WP_168693783.1 | Phosphate-import ATP-binding protein PhnC | VF |
| O6760_RS33190 | 52960..53817 | - | 858 | WP_168693819.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| O6760_RS33195 | 53817..55670 | - | 1854 | WP_168693782.1 | cytochrome c peroxidase | - |
| O6760_RS33200 | 55790..56245 | + | 456 | WP_168693781.1 | Transcriptional regulator MntR | VF |
| O6760_RS33205 | 56739..57176 | + | 438 | WP_209171777.1 | IS66 family transposase IS66 | Transposase |
| O6760_RS33210 | 57173..57520 | + | 348 | WP_209171776.1 | IS66 family transposase IS66 | Transposase |
| O6760_RS33215 | 57617..59203 | + | 1587 | WP_269586500.1 | IS66 family transposase IS66 | Transposase |
| O6760_RS33220 | 59200..59814 | + | 615 | WP_209171774.1 | plasmid pRiA4b ORF-3 family protein | - |
| O6760_RS33225 | 59922..60260 | + | 339 | WP_228931058.1 | IS66 family transposase ISUnCu14 | Transposase |
| O6760_RS33230 | 60257..60610 | + | 354 | WP_023001579.1 | IS66 family transposase ISRel8 | Transposase |
| O6760_RS33235 | 60665..62215 | + | 1551 | WP_228866875.1 | IS66 family transposase ISRel8 | Transposase |
| O6760_RS33240 | 62310..62819 | - | 510 | WP_168693780.1 | copper chaperone PCu(A)C | - |
| O6760_RS33245 | 63127..63240 | + | 114 | Protein_62 | IS481 family transposase | - |
| O6760_RS33250 | 63402..64442 | + | 1041 | WP_168693779.1 | IS481 family transposase ISVvu4 | Transposase |
| O6760_RS33255 | 64593..65219 | - | 627 | WP_168693778.1 | conjugal transfer protein TraH | - |
| O6760_RS33260 | 65224..66474 | - | 1251 | WP_267480489.1 | conjugal transfer protein TraB | - |
| O6760_RS33265 | 66383..66877 | - | 495 | WP_228873492.1 | conjugative transfer signal peptidase TraF | - |
| O6760_RS33270 | 66937..70314 | - | 3378 | WP_269586479.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| O6760_RS33275 | 70923..71174 | + | 252 | WP_168693775.1 | TraC family protein | - |
| O6760_RS33280 | 71203..71409 | + | 207 | Protein_69 | conjugal transfer protein TraD | - |
| O6760_RS33285 | 71399..73318 | + | 1920 | WP_269586478.1 | hypothetical protein | VF |
| O6760_RS33290 | 73352..73645 | - | 294 | WP_075282926.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| O6760_RS33295 | 73642..73890 | - | 249 | WP_075282925.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| O6760_RS33300 | 74136..74300 | - | 165 | WP_168693765.1 | hypothetical protein | - |
| O6760_RS33305 | 74664..74924 | + | 261 | WP_269586477.1 | WGR domain-containing protein | - |
| O6760_RS33310 | 75012..75329 | - | 318 | WP_075282947.1 | DUF736 domain-containing protein | - |
| O6760_RS33315 | 76053..76982 | - | 930 | WP_269586476.1 | zincin-like metallopeptidase domain-containing protein | - |
| O6760_RS33320 | 77253..77438 | - | 186 | WP_269586475.1 | hypothetical protein | - |
| O6760_RS33325 | 77770..78165 | - | 396 | WP_209171702.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| O6760_RS33330 | 78158..78424 | - | 267 | WP_209171699.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| O6760_RS33335 | 78534..79121 | - | 588 | WP_209171698.1 | hypothetical protein | - |
| O6760_RS33340 | 79478..79816 | - | 339 | WP_209171697.1 | hypothetical protein | - |
| O6760_RS33345 | 79813..80688 | - | 876 | WP_209171696.1 | hypothetical protein | - |
| O6760_RS33350 | 80685..81158 | - | 474 | WP_209171695.1 | hypothetical protein | - |
| O6760_RS33355 | 81246..82919 | - | 1674 | WP_209171694.1 | ParB/RepB/Spo0J family partition protein | - |
| O6760_RS33360 | 83177..88285 | - | 5109 | WP_269586490.1 | N-6 DNA methylase | - |
| O6760_RS33365 | 88373..88771 | - | 399 | WP_269586491.1 | DUF3085 domain-containing protein | - |
| O6760_RS33370 | 88780..89376 | - | 597 | WP_269586492.1 | DUF1419 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|