MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 160136 bp
Accession: NZ_CP114788 Location: 1..160136 Organism: Roseibium sp. Sym1 Replicon: plasmid unnamed2
Accession: NZ_CP114788 Location: 1..160136 Organism: Roseibium sp. Sym1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O6760_RS31565 | 525..1547 | + | 1023 | WP_075284020.1 | GSU2403 family nucleotidyltransferase fold protein | - |
| O6760_RS31570 | 1666..2115 | - | 450 | WP_075284021.1 | MucR family transcriptional regulator | - |
| O6760_RS31575 | 3852..5075 | + | 1224 | WP_075284022.1 | Cell division protein PomZ | VF |
| O6760_RS31580 | 5072..6124 | + | 1053 | WP_083660788.1 | plasmid partitioning protein RepB | - |
| O6760_RS31585 | 6343..7599 | + | 1257 | WP_075284023.1 | plasmid replication protein RepC | - |
| O6760_RS31590 | 7727..8650 | - | 924 | WP_075284024.1 | Tn3 family transposase ISPsy42 | Transposase |
| O6760_RS31595 | 8933..10039 | + | 1107 | WP_075284025.1 | RHE_PE00001 family protein | - |
| O6760_RS31600 | 10143..11060 | + | 918 | WP_075284026.1 | hypothetical protein | - |
| O6760_RS31605 | 11050..11538 | + | 489 | WP_075284027.1 | hypothetical protein | - |
| O6760_RS31610 | 11535..13559 | + | 2025 | WP_075284028.1 | hypothetical protein | - |
| O6760_RS31615 | 13625..14254 | - | 630 | WP_228873471.1 | TIGR02391 family protein | - |
| O6760_RS31620 | 14380..14796 | - | 417 | WP_075284029.1 | IS607 family transposase IS607 | Transposase |
| O6760_RS31625 | 14872..15258 | + | 387 | WP_075284030.1 | mercuric transporter MerT family protein | - |
| O6760_RS31630 | 15272..15577 | + | 306 | WP_075284031.1 | hypothetical protein | - |
| O6760_RS31635 | 15587..15841 | + | 255 | WP_075284032.1 | hypothetical protein | - |
| O6760_RS31640 | 15838..16065 | + | 228 | WP_075284033.1 | mercury resistance system transport protein MerF | - |
| O6760_RS31645 | 16043..17482 | + | 1440 | WP_228873469.1 | mercury(II) reductase | - |
| O6760_RS31650 | 17600..17929 | - | 330 | WP_168693850.1 | YnfA family protein | - |
| O6760_RS31655 | 17979..18557 | - | 579 | WP_168693849.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| O6760_RS31660 | 18711..19649 | + | 939 | Protein_19 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| O6760_RS31665 | 19661..22624 | - | 2964 | WP_208984812.1 | Tn3 family transposase TnpA_ISAzs29 | Transposase |
| O6760_RS31670 | 22754..23353 | + | 600 | WP_009452622.1 | Tn3 family transposase ISPsy42 | Transposase |
| O6760_RS31675 | 23496..23900 | - | 405 | WP_055661663.1 | helix-turn-helix domain-containing protein | - |
| O6760_RS31680 | 23971..24630 | - | 660 | WP_028793180.1 | thioredoxin domain-containing protein | - |
| O6760_RS31685 | 24627..25067 | - | 441 | WP_024706423.1 | disulfide bond formation protein B | - |
| O6760_RS31690 | 25289..27421 | + | 2133 | WP_040673348.1 | heavy metal translocating P-type ATPase | - |
| O6760_RS31695 | 27488..28105 | + | 618 | WP_018065776.1 | cation transporter | - |
| O6760_RS31700 | 28098..28601 | + | 504 | WP_009452628.1 | copper chaperone PCu(A)C | - |
| O6760_RS31705 | 28676..29218 | + | 543 | WP_269586471.1 | SCO family protein | - |
| O6760_RS31710 | 29218..29961 | + | 744 | WP_009452630.1 | cytochrome c biogenesis protein CcdA | - |
| O6760_RS31715 | 29987..30451 | + | 465 | WP_009452631.1 | signal peptidase II | - |
| O6760_RS31720 | 30448..31560 | + | 1113 | WP_075282879.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| O6760_RS31725 | 31717..33759 | + | 2043 | Protein_32 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| O6760_RS31730 | 33716..34087 | - | 372 | WP_228873468.1 | hypothetical protein | - |
| O6760_RS31735 | 34183..35505 | - | 1323 | WP_075282899.1 | type II toxin-antitoxin system HipA family toxin | - |
| O6760_RS31740 | 35509..35865 | - | 357 | WP_228873466.1 | helix-turn-helix transcriptional regulator | - |
| O6760_RS31745 | 36296..37189 | - | 894 | WP_075282901.1 | DMT family transporter | - |
| O6760_RS31750 | 37186..38541 | - | 1356 | WP_083660635.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| O6760_RS31755 | 38538..39782 | - | 1245 | WP_139314151.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| O6760_RS31760 | 40605..40913 | - | 309 | WP_139314152.1 | hypothetical protein | - |
| O6760_RS31765 | 40984..41631 | - | 648 | WP_075282904.1 | sigma-70 family RNA polymerase sigma factor | - |
| O6760_RS31770 | 41667..42353 | - | 687 | WP_075282905.1 | hypothetical protein | - |
| O6760_RS31775 | 42352..43017 | + | 666 | WP_208992311.1 | potassium channel family protein | - |
| O6760_RS31780 | 43039..44196 | - | 1158 | WP_075282906.1 | Na+/H+ antiporter NhaA | - |
| O6760_RS31785 | 44193..45455 | - | 1263 | WP_228873486.1 | APC family permease | - |
| O6760_RS31790 | 45855..46682 | - | 828 | WP_139314153.1 | hypothetical protein | - |
| O6760_RS31795 | 46936..47586 | - | 651 | WP_075282909.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| O6760_RS31800 | 47583..47831 | - | 249 | WP_075282946.1 | DUF2933 domain-containing protein | - |
| O6760_RS31805 | 47849..50230 | - | 2382 | WP_269586472.1 | copper-translocating P-type ATPase | - |
| O6760_RS31810 | 50239..50688 | - | 450 | WP_075282911.1 | hypothetical protein | - |
| O6760_RS31815 | 51453..52346 | + | 894 | WP_075282912.1 | DUF3991 and toprim domain-containing protein | - |
| O6760_RS31820 | 52557..53153 | + | 597 | WP_075282913.1 | DUF1419 domain-containing protein | - |
| O6760_RS31825 | 53162..53560 | + | 399 | WP_075282914.1 | DUF3085 domain-containing protein | - |
| O6760_RS31830 | 53649..58757 | + | 5109 | WP_269586473.1 | DEAD/DEAH box helicase family protein | - |
| O6760_RS31835 | 58769..59266 | - | 498 | WP_075282916.1 | RES family NAD+ phosphorylase | - |
| O6760_RS31840 | 59272..59622 | - | 351 | WP_008188369.1 | DUF2384 domain-containing protein | - |
| O6760_RS31845 | 60036..61724 | + | 1689 | WP_269586474.1 | ParB/RepB/Spo0J family partition protein | - |
| O6760_RS31850 | 61815..62288 | + | 474 | WP_075282918.1 | hypothetical protein | - |
| O6760_RS31855 | 62285..63160 | + | 876 | WP_075282919.1 | hypothetical protein | - |
| O6760_RS31860 | 63157..63507 | + | 351 | WP_075282920.1 | hypothetical protein | - |
| O6760_RS31865 | 63865..64452 | + | 588 | WP_075282921.1 | hypothetical protein | - |
| O6760_RS31870 | 64685..68140 | - | 3456 | WP_075282922.1 | class I SAM-dependent DNA methyltransferase | - |
| O6760_RS31875 | 68646..68831 | + | 186 | WP_269586475.1 | hypothetical protein | - |
| O6760_RS31880 | 69102..70031 | + | 930 | WP_269586476.1 | zincin-like metallopeptidase domain-containing protein | - |
| O6760_RS31885 | 70755..71072 | + | 318 | WP_075282947.1 | DUF736 domain-containing protein | - |
| O6760_RS31890 | 71160..71420 | - | 261 | WP_269586477.1 | WGR domain-containing protein | - |
| O6760_RS31895 | 71784..71948 | + | 165 | WP_168693765.1 | hypothetical protein | - |
| O6760_RS31900 | 72194..72442 | + | 249 | WP_075282925.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| O6760_RS31905 | 72439..72732 | + | 294 | WP_075282926.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| O6760_RS31910 | 72766..74685 | - | 1920 | WP_269586478.1 | hypothetical protein | VF |
| O6760_RS31915 | 74675..74881 | - | 207 | Protein_70 | conjugal transfer protein TraD | - |
| O6760_RS31920 | 74910..75161 | - | 252 | WP_168693775.1 | TraC family protein | - |
| O6760_RS31925 | 75770..79147 | + | 3378 | WP_269586479.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| O6760_RS31930 | 79207..79701 | + | 495 | WP_228873492.1 | conjugative transfer signal peptidase TraF | - |
| O6760_RS31935 | 79610..80860 | + | 1251 | WP_267480489.1 | conjugal transfer protein TraB | - |
| O6760_RS31940 | 80865..81491 | + | 627 | WP_269586465.1 | conjugal transfer protein TraH | - |
| O6760_RS31945 | 82019..82306 | - | 288 | Protein_76 | IS110 family transposase ISAzs32 | Transposase |
| O6760_RS31950 | 82307..82576 | - | 270 | Protein_77 | IS110 family transposase ISAzs32 | Transposase |
| O6760_RS31955 | 83055..83912 | + | 858 | WP_075282933.1 | flagellar motor protein MotB | - |
| O6760_RS31960 | 83963..85087 | + | 1125 | Protein_79 | IS21 family transposase ISAzs30 | Transposase |
| O6760_RS31965 | 85131..85925 | + | 795 | WP_075282935.1 | IS21 family transposase ISRel3 | Transposase |
| O6760_RS31970 | 86248..86999 | + | 752 | WP_139314154.1 | IS5 family transposase ISAli9 | Transposase |
| O6760_RS31975 | 87013..87781 | - | 769 | Protein_82 | IS5 family transposase IS869 | Transposase |
| O6760_RS31980 | 88056..88811 | + | 756 | WP_075284825.1 | heparan-alpha-glucosaminide N-acetyltransferase | - |
| O6760_RS31985 | 88848..89852 | - | 1005 | WP_075284826.1 | murein L,D-transpeptidase family protein | - |
| O6760_RS31990 | 90246..90941 | - | 696 | WP_075284827.1 | VTT domain-containing protein | - |
| O6760_RS31995 | 91077..91230 | - | 154 | Protein_86 | transposase | - |
| O6760_RS32005 | 92341..93438 | + | 1098 | WP_075284839.1 | acyltransferase family protein | - |
| O6760_RS32010 | 93548..94240 | - | 693 | WP_075284840.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| O6760_RS32015 | 94302..96626 | - | 2325 | WP_267480492.1 | copper-translocating P-type ATPase | - |
| O6760_RS32020 | 96938..97144 | - | 207 | WP_075284818.1 | heavy-metal-associated domain-containing protein | - |
| O6760_RS32025 | 97299..99809 | + | 2511 | WP_209171661.1 | Copper-transporting P-type ATPase | VF |
| O6760_RS32030 | 99821..100237 | + | 417 | WP_075284727.1 | Cu(I)-responsive transcriptional regulator | - |
| O6760_RS32035 | 100366..100872 | + | 507 | WP_075284726.1 | cytochrome b/b6 domain-containing protein | - |
| O6760_RS32040 | 100951..101757 | - | 807 | WP_075284725.1 | polyphosphate kinase 2 | - |
| O6760_RS32045 | 101863..102564 | - | 702 | WP_075284730.1 | CBS domain-containing protein | - |
| O6760_RS32050 | 102669..103106 | - | 438 | WP_075284724.1 | cytochrome c | - |
| O6760_RS32055 | 103313..105091 | - | 1779 | WP_075284722.1 | DUF3141 domain-containing protein | - |
| O6760_RS32060 | 105091..105411 | - | 321 | WP_075284721.1 | DUF5676 family membrane protein | - |
| O6760_RS32065 | 105404..105745 | - | 342 | WP_269586466.1 | YHS domain-containing protein | - |
| O6760_RS32070 | 105941..106324 | - | 384 | WP_139314320.1 | hypothetical protein | - |
| O6760_RS32075 | 107025..107606 | + | 582 | WP_083660862.1 | cytochrome c | - |
| O6760_RS32080 | 107610..108500 | + | 891 | WP_075284718.1 | cytochrome c | - |
| O6760_RS32085 | 108523..109899 | + | 1377 | WP_228873420.1 | multicopper oxidase family protein | - |
| O6760_RS32090 | 109965..110318 | + | 354 | WP_269586467.1 | hypothetical protein | - |
| O6760_RS32095 | 110385..110951 | + | 567 | WP_083660861.1 | L,D-transpeptidase | - |
| O6760_RS32100 | 111080..111253 | + | 174 | WP_228873488.1 | DUF2933 domain-containing protein | - |
| O6760_RS32105 | 111436..112104 | + | 669 | WP_075284715.1 | L,D-transpeptidase | - |
| O6760_RS32110 | 112101..112589 | + | 489 | WP_075284714.1 | cytochrome c | - |
| O6760_RS32115 | 112586..113329 | + | 744 | WP_075284713.1 | DsbA family protein | - |
| O6760_RS32120 | 114471..115139 | + | 669 | WP_209171659.1 | cytochrome c biogenesis protein CcdA | - |
| O6760_RS32125 | 115136..116383 | + | 1248 | WP_075284783.1 | MFS transporter | - |
| O6760_RS32130 | 116394..116723 | - | 330 | WP_075284782.1 | YnfA family protein | - |
| O6760_RS32135 | 116995..117285 | + | 291 | WP_209171657.1 | hypothetical protein | - |
| O6760_RS32140 | 117336..118901 | - | 1566 | WP_075284780.1 | IS66 family transposase ISRel8 | Transposase |
| O6760_RS32145 | 118956..119309 | - | 354 | WP_075284779.1 | IS66 family transposase ISRel8 | Transposase |
| O6760_RS32150 | 119306..119758 | - | 453 | WP_269586480.1 | IS66 family transposase ISUnCu14 | Transposase |
| O6760_RS32155 | 120077..120736 | - | 660 | WP_075284778.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| O6760_RS32160 | 120836..121684 | + | 849 | WP_075284777.1 | sterol desaturase family protein | - |
| O6760_RS32165 | 121925..122686 | + | 762 | WP_208992489.1 | VTT domain-containing protein | - |
| O6760_RS32170 | 122859..125222 | - | 2364 | WP_228873476.1 | Copper-exporting P-type ATPase | VF |
| O6760_RS32175 | 125219..126169 | - | 951 | WP_075283993.1 | ribose-phosphate diphosphokinase | - |
| O6760_RS32180 | 126166..127674 | - | 1509 | WP_075283994.1 | thymidine phosphorylase family protein | - |
| O6760_RS32185 | 127671..129056 | - | 1386 | WP_075283995.1 | MBL fold metallo-hydrolase | - |
| O6760_RS32190 | 129263..129700 | - | 438 | WP_269586468.1 | EF-hand domain-containing protein | - |
| O6760_RS32195 | 130602..131288 | - | 687 | WP_075283996.1 | hypothetical protein | - |
| O6760_RS32200 | 132354..133865 | + | 1512 | WP_075283998.1 | TolC family protein | - |
| O6760_RS32205 | 133892..135259 | + | 1368 | WP_075284035.1 | copper oxidase | - |
| O6760_RS32210 | 135358..135867 | + | 510 | WP_083660791.1 | cupredoxin family protein | - |
| O6760_RS32215 | 135891..136178 | + | 288 | WP_055661655.1 | copper-binding protein | - |
| O6760_RS32220 | 136277..137539 | + | 1263 | WP_083660785.1 | adenylate/guanylate cyclase domain-containing protein | - |
| O6760_RS32225 | 138068..140230 | + | 2163 | WP_208992418.1 | protein-disulfide reductase DsbD family protein | - |
| O6760_RS32230 | 140497..141399 | + | 903 | WP_075283999.1 | prolipoprotein diacylglyceryl transferase | - |
| O6760_RS32235 | 141562..142626 | + | 1065 | WP_075284000.1 | YncE family protein | - |
| O6760_RS32240 | 142783..143214 | + | 432 | WP_075284001.1 | cytochrome c | - |
| O6760_RS32245 | 143713..144435 | + | 723 | WP_075284003.1 | Transcriptional regulatory protein OmpR | VF |
| O6760_RS32250 | 144432..145877 | + | 1446 | WP_075284004.1 | ATP-binding protein | - |
| O6760_RS32255 | 145879..147876 | + | 1998 | WP_209171644.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| O6760_RS32260 | 147880..148443 | + | 564 | WP_075284006.1 | DsbE family thiol:disulfide interchange protein | - |
| O6760_RS32265 | 148443..148919 | + | 477 | WP_075284007.1 | cytochrome c-type biogenesis protein CcmH | - |
| O6760_RS32270 | 148916..150070 | + | 1155 | WP_075284008.1 | c-type cytochrome biogenesis protein CcmI | - |
| O6760_RS32275 | 150290..151630 | - | 1341 | WP_269586469.1 | IncP-type conjugal transfer protein TrbI | - |
| O6760_RS32280 | 151643..152110 | - | 468 | WP_209171674.1 | conjugal transfer protein TrbH | - |
| O6760_RS32285 | 152113..152910 | - | 798 | WP_269586481.1 | P-type conjugative transfer protein TrbG | - |
| O6760_RS32290 | 152976..153638 | - | 663 | WP_209171676.1 | conjugal transfer protein TrbF | - |
| O6760_RS32295 | 153654..154811 | - | 1158 | WP_209171677.1 | P-type conjugative transfer protein TrbL | - |
| O6760_RS32300 | 154811..155017 | - | 207 | WP_075284014.1 | DUF2749 domain-containing protein | - |
| O6760_RS32305 | 155020..155811 | - | 792 | WP_075284015.1 | P-type conjugative transfer protein TrbJ | - |
| O6760_RS32310 | 155789..158236 | - | 2448 | WP_269586470.1 | conjugal transfer protein TrbE | - |
| O6760_RS32315 | 158239..158535 | - | 297 | WP_075284017.1 | conjugal transfer protein TrbD | - |
| O6760_RS32320 | 158528..158887 | - | 360 | WP_075284018.1 | TrbC/VirB2 family protein | - |
| O6760_RS32325 | 158877..159881 | - | 1005 | WP_075284019.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|