MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 4002 bp
Accession: NZ_CP114550 Location: 1839839..1843840 Organism: Xylella fastidiosa subsp. pauca strain AM2-Angelina Replicon: chromosome
Accession: NZ_CP114550 Location: 1839839..1843840 Organism: Xylella fastidiosa subsp. pauca strain AM2-Angelina Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O4445_RS08620 (O4445_08620) | 1834912..1835223 | + | 312 | WP_088371310.1 | single-stranded DNA-binding protein | - |
| O4445_RS08625 (O4445_08625) | 1835291..1835611 | + | 321 | WP_282454381.1 | hypothetical protein | - |
| O4445_RS08630 (O4445_08630) | 1835611..1835820 | + | 210 | WP_088371308.1 | hypothetical protein | - |
| O4445_RS08635 (O4445_08635) | 1835850..1836053 | + | 204 | WP_229926352.1 | major capsid protein | - |
| O4445_RS08640 (O4445_08640) | 1836084..1837586 | + | 1503 | WP_282454382.1 | virulence factor TspB C-terminal domain-related protein | - |
| O4445_RS08645 (O4445_08645) | 1837590..1837931 | + | 342 | WP_060872048.1 | DUF2523 family protein | - |
| O4445_RS08650 (O4445_08650) | 1837931..1839064 | + | 1134 | WP_088371305.1 | zonular occludens toxin domain-containing protein | - |
| O4445_RS08655 (O4445_08655) | 1839119..1839526 | + | 408 | WP_088371303.1 | DUF4124 domain-containing protein | - |
| O4445_RS08660 (O4445_08660) | 1839552..1839785 | - | 234 | WP_058569894.1 | hypothetical protein | - |
| O4445_RS08665 (O4445_08665) | 1840047..1840877 | + | 831 | WP_282454383.1 | hypothetical protein ; Integrase | Integrase |
| O4445_RS08670 (O4445_08670) | 1840858..1841310 | - | 453 | WP_282454384.1 | DUF3693 domain-containing protein | - |
| O4445_RS08675 (O4445_08675) | 1841441..1842622 | + | 1182 | WP_282454385.1 | replication initiation factor domain-containing protein | - |
| O4445_RS08680 (O4445_08680) | 1842609..1842932 | + | 324 | WP_282454386.1 | hypothetical protein | - |
| O4445_RS08685 (O4445_08685) | 1843205..1843528 | - | 324 | WP_282454387.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| O4445_RS08690 (O4445_08690) | 1843525..1843746 | - | 222 | WP_010894329.1 | antitoxin MazE family protein | Antitoxin Detail |
| O4445_RS08695 (O4445_08695) | 1844406..1845248 | - | 843 | WP_228762888.1 | methylisocitrate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|