MGE detailed information
MGE type: Prophage MGE length: 42834 bp
Accession: NZ_CP114549 Location: 2259642..2302475 Organism: Xylella fastidiosa subsp. pauca strain ALM4 Replicon: chromosome
Accession: NZ_CP114549 Location: 2259642..2302475 Organism: Xylella fastidiosa subsp. pauca strain ALM4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O4444_RS10195 (O4444_10195) | 2254760..2255761 | - | 1002 | WP_023908101.1 | phenylalanine--tRNA ligase subunit alpha | - |
| O4444_RS10200 (O4444_10200) | 2256033..2256392 | - | 360 | WP_010893263.1 | 50S ribosomal protein L20 | - |
| O4444_RS10205 (O4444_10205) | 2256403..2256600 | - | 198 | WP_004090402.1 | 50S ribosomal protein L35 | - |
| O4444_RS10210 (O4444_10210) | 2256846..2257331 | - | 486 | WP_031345897.1 | translation initiation factor IF-3 | - |
| O4444_RS10215 (O4444_10215) | 2257441..2259348 | - | 1908 | WP_010893260.1 | threonine--tRNA ligase | - |
| O4444_RS10220 (O4444_10220) | 2259414..2259548 | - | 135 | WP_268233762.1 | hypothetical protein | - |
| O4444_RS10225 (O4444_10225) | 2260437..2261519 | - | 1083 | WP_088372118.1 | phage late control D family protein | - |
| O4444_RS10230 (O4444_10230) | 2261510..2261728 | - | 219 | WP_060872013.1 | tail protein X | - |
| O4444_RS10235 (O4444_10235) | 2261725..2262207 | - | 483 | WP_282459571.1 | phage tail protein | - |
| O4444_RS10240 (O4444_10240) | 2262204..2264459 | - | 2256 | WP_282459572.1 | phage tail tape measure protein | - |
| O4444_RS10245 (O4444_10245) | 2264550..2264837 | - | 288 | WP_023907005.1 | phage tail assembly protein | - |
| O4444_RS10250 (O4444_10250) | 2264840..2265349 | - | 510 | WP_088372112.1 | phage major tail tube protein | - |
| O4444_RS10255 (O4444_10255) | 2265349..2266527 | - | 1179 | WP_023907007.1 | phage tail sheath family protein | - |
| O4444_RS10260 (O4444_10260) | 2266592..2268184 | - | 1593 | WP_282459574.1 | hypothetical protein | - |
| O4444_RS10265 (O4444_10265) | 2268192..2268749 | - | 558 | WP_282459575.1 | phage tail protein I | - |
| O4444_RS10270 (O4444_10270) | 2268742..2269635 | - | 894 | WP_023907762.1 | baseplate J/gp47 family protein | - |
| O4444_RS10275 (O4444_10275) | 2269635..2269997 | - | 363 | WP_233242664.1 | GPW/gp25 family protein | - |
| O4444_RS10280 (O4444_10280) | 2270191..2270493 | + | 303 | WP_010894925.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| O4444_RS10285 (O4444_10285) | 2270496..2270897 | + | 402 | WP_060872143.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| O4444_RS10290 (O4444_10290) | 2270966..2271553 | - | 588 | WP_088372104.1 | phage baseplate assembly protein V | - |
| O4444_RS10295 (O4444_10295) | 2271550..2272092 | - | 543 | WP_023907017.1 | hypothetical protein | - |
| O4444_RS10300 (O4444_10300) | 2272068..2272589 | - | 522 | WP_010893241.1 | hypothetical protein | - |
| O4444_RS10305 (O4444_10305) | 2272586..2272909 | - | 324 | WP_042462902.1 | hypothetical protein | - |
| O4444_RS10310 (O4444_10310) | 2272909..2273169 | - | 261 | WP_010893239.1 | hypothetical protein | - |
| O4444_RS10315 (O4444_10315) | 2273187..2275067 | - | 1881 | WP_088372102.1 | phage major capsid protein | - |
| O4444_RS10320 (O4444_10320) | 2275051..2276649 | - | 1599 | WP_088372100.1 | phage portal protein | - |
| O4444_RS10325 (O4444_10325) | 2276646..2277194 | - | 549 | WP_088372098.1 | hypothetical protein | - |
| O4444_RS10330 (O4444_10330) | 2277198..2279150 | - | 1953 | WP_088372096.1 | phage terminase large subunit family protein | - |
| O4444_RS10335 (O4444_10335) | 2279143..2279688 | - | 546 | WP_088372094.1 | terminase small subunit | - |
| O4444_RS10340 (O4444_10340) | 2279861..2280154 | - | 294 | WP_282454357.1 | hypothetical protein | - |
| O4444_RS10345 (O4444_10345) | 2280087..2280548 | - | 462 | WP_088372092.1 | hypothetical protein | - |
| O4444_RS10350 (O4444_10350) | 2280538..2280807 | - | 270 | WP_282459748.1 | phage holin family protein | - |
| O4444_RS10355 (O4444_10355) | 2280860..2281354 | - | 495 | WP_282459576.1 | lysozyme | - |
| O4444_RS10360 (O4444_10360) | 2281321..2281938 | - | 618 | WP_282459577.1 | hypothetical protein | - |
| O4444_RS10365 (O4444_10365) | 2282071..2282268 | - | 198 | WP_282459578.1 | hypothetical protein | - |
| O4444_RS10370 (O4444_10370) | 2282779..2285310 | - | 2532 | WP_282459579.1 | phage/plasmid primase, P4 family | - |
| O4444_RS10375 (O4444_10375) | 2285450..2286232 | - | 783 | WP_282459580.1 | Bro-N domain-containing protein | - |
| O4444_RS10380 (O4444_10380) | 2286731..2286892 | + | 162 | WP_155115001.1 | hypothetical protein | - |
| O4444_RS10385 (O4444_10385) | 2287020..2287265 | - | 246 | WP_140189808.1 | hypothetical protein | - |
| O4444_RS10390 (O4444_10390) | 2287326..2287541 | - | 216 | WP_282459581.1 | hypothetical protein | - |
| O4444_RS10395 (O4444_10395) | 2287571..2287759 | - | 189 | WP_282459582.1 | hypothetical protein | - |
| O4444_RS10400 (O4444_10400) | 2287813..2288037 | - | 225 | WP_282459583.1 | hypothetical protein | - |
| O4444_RS10405 (O4444_10405) | 2288139..2288444 | + | 306 | WP_023907048.1 | hypothetical protein | - |
| O4444_RS10410 (O4444_10410) | 2288441..2288641 | - | 201 | WP_031338060.1 | Rha family transcriptional regulator | - |
| O4444_RS10415 (O4444_10415) | 2288715..2289485 | + | 771 | WP_010894935.1 | helix-turn-helix transcriptional regulator | - |
| O4444_RS10420 (O4444_10420) | 2289654..2290193 | + | 540 | WP_282459585.1 | hypothetical protein | - |
| O4444_RS10425 (O4444_10425) | 2290230..2290541 | + | 312 | WP_052262873.1 | hypothetical protein | - |
| O4444_RS10430 (O4444_10430) | 2290729..2291184 | + | 456 | WP_010894938.1 | hypothetical protein | - |
| O4444_RS10435 (O4444_10435) | 2291290..2291679 | + | 390 | WP_010894939.1 | hypothetical protein | - |
| O4444_RS10440 (O4444_10440) | 2291676..2292077 | + | 402 | WP_081089775.1 | hypothetical protein | - |
| O4444_RS10445 (O4444_10445) | 2292077..2292478 | + | 402 | WP_282459586.1 | hypothetical protein | - |
| O4444_RS10450 (O4444_10450) | 2292475..2292669 | + | 195 | WP_088372082.1 | hypothetical protein | - |
| O4444_RS10455 (O4444_10455) | 2292701..2292973 | + | 273 | WP_010893213.1 | hypothetical protein | - |
| O4444_RS10460 (O4444_10460) | 2292970..2293161 | + | 192 | WP_010893212.1 | hypothetical protein | - |
| O4444_RS10465 (O4444_10465) | 2293224..2293658 | + | 435 | WP_282459587.1 | hypothetical protein | - |
| O4444_RS10470 (O4444_10470) | 2293655..2294932 | + | 1278 | WP_282459588.1 | DUF2800 domain-containing protein | - |
| O4444_RS10475 (O4444_10475) | 2294932..2295498 | + | 567 | WP_088572637.1 | DUF2815 family protein | - |
| O4444_RS10480 (O4444_10480) | 2295567..2296718 | + | 1152 | WP_282459749.1 | BRO family protein | - |
| O4444_RS10485 (O4444_10485) | 2296786..2298900 | + | 2115 | WP_282459589.1 | DNA polymerase | - |
| O4444_RS10490 (O4444_10490) | 2298900..2299175 | + | 276 | WP_230956781.1 | VRR-NUC domain-containing protein | - |
| O4444_RS10495 (O4444_10495) | 2299177..2299572 | - | 396 | WP_010894949.1 | hypothetical protein | - |
| O4444_RS10500 (O4444_10500) | 2299636..2301054 | + | 1419 | WP_088372074.1 | DEAD/DEAH box helicase | - |
| O4444_RS10505 (O4444_10505) | 2301051..2301215 | + | 165 | WP_010894951.1 | hypothetical protein | - |
| O4444_RS10510 (O4444_10510) | 2301208..2301456 | + | 249 | WP_023907056.1 | DUF4224 domain-containing protein | - |
| O4444_RS10515 (O4444_10515) | 2301456..2302475 | + | 1020 | WP_010894952.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| O4444_RS10520 (O4444_10520) | 2302796..2303074 | + | 279 | WP_010894953.1 | hypothetical protein | - |
| O4444_RS10525 (O4444_10525) | 2304201..2305065 | + | 865 | Protein_2057 | 30S ribosomal protein S6--L-glutamate ligase | - |
| O4444_RS10530 (O4444_10530) | 2305751..2306428 | + | 678 | WP_010894955.1 | response regulator transcription factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|