MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 29750 bp
Accession: NZ_CP114365 Location: 1..29750 Organism: Klebsiella variicola strain 2022CK-00568 Replicon: plasmid unnamed4
Accession: NZ_CP114365 Location: 1..29750 Organism: Klebsiella variicola strain 2022CK-00568 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPU52_RS29570 (OPU52_29565) | 1014..1880 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| OPU52_RS29575 (OPU52_29570) | 1893..2297 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| OPU52_RS29580 (OPU52_29575) | 2432..2959 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| OPU52_RS29585 (OPU52_29580) | 3265..3480 | - | 216 | WP_000806548.1 | hypothetical protein | - |
| OPU52_RS29590 (OPU52_29585) | 3505..3774 | - | 270 | WP_001086090.1 | hypothetical protein | - |
| OPU52_RS29595 (OPU52_29590) | 3849..4496 | - | 648 | WP_000587671.1 | division plane positioning ATPase MipZ | - |
| OPU52_RS29600 (OPU52_29595) | 5117..5581 | - | 465 | WP_059342651.1 | H-NS family nucleoid-associated regulatory protein | - |
| OPU52_RS29605 (OPU52_29600) | 5599..5805 | - | 207 | WP_000850856.1 | hemolysin expression modulator Hha | - |
| OPU52_RS29610 (OPU52_29605) | 5802..7955 | - | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| OPU52_RS29615 (OPU52_29610) | 7960..8535 | - | 576 | WP_001199074.1 | hypothetical protein | - |
| OPU52_RS29620 (OPU52_29615) | 8641..9045 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| OPU52_RS29625 (OPU52_29620) | 9061..9555 | - | 495 | WP_001215680.1 | thermonuclease family protein | - |
| OPU52_RS29630 (OPU52_29625) | 9552..9860 | - | 309 | WP_000647576.1 | hypothetical protein | - |
| OPU52_RS29635 (OPU52_29630) | 9963..10217 | - | 255 | WP_000415096.1 | hypothetical protein | - |
| OPU52_RS29640 (OPU52_29635) | 10223..10528 | - | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OPU52_RS29645 (OPU52_29640) | 10512..10934 | - | 423 | WP_015059903.1 | cag pathogenicity island Cag12 family protein | - |
| OPU52_RS29650 (OPU52_29645) | 10943..12805 | - | 1863 | WP_000847106.1 | relaxosome-coupling protein TaxB | - |
| OPU52_RS29655 (OPU52_29650) | 12792..13820 | - | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| OPU52_RS29660 (OPU52_29655) | 13822..14940 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| OPU52_RS29665 (OPU52_29660) | 14933..15841 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| OPU52_RS29670 (OPU52_29665) | 15838..16524 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| OPU52_RS29675 (OPU52_29670) | 17039..18133 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| OPU52_RS29680 (OPU52_29675) | 18145..18861 | - | 717 | WP_000832283.1 | type IV secretion system protein | - |
| OPU52_RS29685 (OPU52_29680) | 18873..21620 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| OPU52_RS29690 (OPU52_29685) | 21639..21965 | - | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| OPU52_RS29695 (OPU52_29690) | 21979..22599 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| OPU52_RS29700 (OPU52_29695) | 22955..23170 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| OPU52_RS29705 (OPU52_29700) | 23167..23460 | - | 294 | WP_000134733.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| OPU52_RS29710 (OPU52_29705) | 23537..24766 | - | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| OPU52_RS29715 (OPU52_29710) | 24770..25273 | - | 504 | WP_000781813.1 | relaxosome-coupling protein TaxA | - |
| OPU52_RS29720 (OPU52_29715) | 25634..25981 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OPU52_RS29725 (OPU52_29720) | 25978..26226 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OPU52_RS29730 (OPU52_29725) | 26531..26881 | - | 351 | WP_000854259.1 | hypothetical protein | - |
| OPU52_RS29735 (OPU52_29730) | 26972..27271 | - | 300 | WP_000650309.1 | hypothetical protein | - |
| OPU52_RS29740 (OPU52_29735) | 27725..27952 | - | 228 | WP_000801440.1 | hypothetical protein | - |
| OPU52_RS29745 (OPU52_29740) | 27939..28190 | - | 252 | WP_001230707.1 | hypothetical protein | - |
| OPU52_RS29750 (OPU52_29745) | 28187..28729 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| OPU52_RS29755 (OPU52_29750) | 28834..29349 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|