MGE detailed information
MGE type: Prophage MGE length: 27929 bp
Accession: NZ_CP114280 Location: 4098668..4126596 Organism: Dickeya lacustris strain LMG30899 Replicon: chromosome
Accession: NZ_CP114280 Location: 4098668..4126596 Organism: Dickeya lacustris strain LMG30899 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1Q98_RS18615 (O1Q98_18620) | 4096791..4097927 | + | 1137 | WP_125258956.1 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| O1Q98_RS18620 (O1Q98_18625) | 4097924..4098577 | + | 654 | WP_125258957.1 | acetyltransferase | - |
| O1Q98_RS18625 (O1Q98_18630) | 4098668..4100086 | + | 1419 | WP_125258958.1 | putative nucleotide-diphospho-sugar transferase | - |
| O1Q98_RS18630 (O1Q98_18635) | 4100207..4101314 | - | 1108 | Protein_3624 | IS3 family transposase ISKpn20 | Transposase |
| O1Q98_RS18635 (O1Q98_18640) | 4101445..4101528 | - | 84 | Protein_3625 | DUF4102 domain-containing protein | - |
| O1Q98_RS18640 (O1Q98_18645) | 4101867..4105256 | - | 3390 | WP_125261324.1 | VPA1262 family protein | - |
| O1Q98_RS18645 (O1Q98_18650) | 4105545..4106270 | - | 726 | WP_125261323.1 | AVAST type 3 anti-phage proein Avs3b | - |
| O1Q98_RS18650 (O1Q98_18655) | 4106212..4112490 | - | 6279 | WP_125261322.1 | AVAST type 3 anti-phage nuclease/ATPase Avs3a | - |
| O1Q98_RS18655 (O1Q98_18660) | 4112721..4113565 | + | 845 | WP_278142462.1 | IS5 family transposase | - |
| O1Q98_RS18660 (O1Q98_18665) | 4113879..4114823 | + | 945 | WP_125260000.1 | zincin-like metallopeptidase domain-containing protein | - |
| O1Q98_RS18665 (O1Q98_18670) | 4115142..4115378 | + | 237 | WP_125260001.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| O1Q98_RS18670 (O1Q98_18675) | 4115381..4115695 | + | 315 | WP_125260002.1 | CcdB family protein | Toxin Detail |
| O1Q98_RS18675 (O1Q98_18680) | 4116106..4116816 | + | 711 | WP_240632785.1 | hypothetical protein | - |
| O1Q98_RS18680 (O1Q98_18685) | 4117009..4117860 | - | 852 | WP_205744273.1 | hypothetical protein | - |
| O1Q98_RS18685 (O1Q98_18690) | 4117854..4119500 | - | 1647 | WP_125260003.1 | AAA family ATPase | - |
| O1Q98_RS18690 (O1Q98_18695) | 4119541..4120648 | + | 1108 | Protein_3636 | IS3 family transposase ISKpn20 | Transposase |
| O1Q98_RS18695 (O1Q98_18700) | 4120664..4120768 | - | 105 | Protein_3637 | AlpA family phage regulatory protein | - |
| O1Q98_RS18700 (O1Q98_18705) | 4120910..4121824 | - | 915 | WP_125259814.1 | hypothetical protein | - |
| O1Q98_RS18705 (O1Q98_18710) | 4122240..4122512 | - | 273 | WP_014699383.1 | helix-turn-helix transcriptional regulator | - |
| O1Q98_RS18710 (O1Q98_18715) | 4122659..4122973 | + | 315 | WP_125259813.1 | helix-turn-helix transcriptional regulator | - |
| O1Q98_RS18715 (O1Q98_18720) | 4123158..4123472 | + | 315 | WP_025918867.1 | helix-turn-helix transcriptional regulator | - |
| O1Q98_RS18720 (O1Q98_18725) | 4123606..4124877 | - | 1272 | WP_125259812.1 | Prophage integrase IntS ; Integrase | Integrase |
| O1Q98_RS18725 (O1Q98_18730) | 4125338..4126201 | + | 864 | WP_125259811.1 | DUF6387 family protein | - |
| O1Q98_RS18730 (O1Q98_18735) | 4126378..4126596 | + | 219 | WP_125259810.1 | AlpA family transcriptional regulator | - |
| O1Q98_RS18735 (O1Q98_18740) | 4126617..4126949 | + | 333 | WP_125259809.1 | hypothetical protein | - |
| O1Q98_RS18740 (O1Q98_18745) | 4127024..4127314 | + | 291 | WP_125259808.1 | hypothetical protein | - |
| O1Q98_RS18745 (O1Q98_18750) | 4127371..4127736 | + | 366 | WP_125259807.1 | hypothetical protein | - |
| O1Q98_RS18750 (O1Q98_18755) | 4127800..4128038 | + | 239 | Protein_3648 | DNA-binding protein | - |
| O1Q98_RS18755 (O1Q98_18760) | 4128314..4129762 | + | 1449 | WP_125259805.1 | ATP-binding protein | - |
| O1Q98_RS18760 (O1Q98_18765) | 4129924..4130412 | - | 489 | WP_125259804.1 | DUF4756 family protein | - |
| O1Q98_RS18765 (O1Q98_18770) | 4130571..4131371 | - | 801 | WP_125259803.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|