MGE detailed information
MGE type: Genomic_island MGE length: 21234 bp
Accession: NZ_CP114130 Location: 4360347..4381580 Organism: Escherichia coli strain NJS001 Replicon: chromosome
Accession: NZ_CP114130 Location: 4360347..4381580 Organism: Escherichia coli strain NJS001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0F11_RS21830 (4356073) | 4356073..4356615 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| N0F11_RS21835 (4356908) | 4356908..4359058 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| N0F11_RS21840 (4359108) | 4359108..4359311 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| N0F11_RS21845 (4359322) | 4359322..4360278 | + | 957 | WP_001297640.1 | GTPase | - |
| N0F11_RS21850 (4360347) | 4360347..4361705 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| N0F11_RS21855 (4361714) | 4361714..4361998 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| N0F11_RS21860 (4362276) | 4362276..4364708 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| N0F11_RS21865 (4364775) | 4364775..4366244 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| N0F11_RS21870 (4366244) | 4366244..4367998 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - (4368148) | 4368148..4368224 | - | 77 | NuclAT_12 | - | Antitoxin Detail |
| - (4368148) | 4368148..4368224 | - | 77 | NuclAT_12 | - | Antitoxin Detail |
| - (4368148) | 4368148..4368224 | - | 77 | NuclAT_12 | - | Antitoxin Detail |
| - (4368148) | 4368148..4368224 | - | 77 | NuclAT_12 | - | Antitoxin Detail |
| - (4368148) | 4368148..4368224 | - | 77 | NuclAT_13 | - | Antitoxin Detail |
| - (4368148) | 4368148..4368224 | - | 77 | NuclAT_13 | - | Antitoxin Detail |
| - (4368148) | 4368148..4368224 | - | 77 | NuclAT_13 | - | Antitoxin Detail |
| - (4368148) | 4368148..4368224 | - | 77 | NuclAT_13 | - | Antitoxin Detail |
| N0F11_RS21875 (4368219) | 4368219..4368560 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| N0F11_RS21880 (4368607) | 4368607..4369770 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| N0F11_RS21885 (4369818) | 4369818..4370699 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| N0F11_RS21890 (4370842) | 4370842..4370994 | - | 153 | WP_001418365.1 | hypothetical protein | - |
| N0F11_RS21895 (4371137) | 4371137..4372549 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| N0F11_RS21900 (4372909) | 4372909..4373749 | - | 841 | Protein_4295 | ISNCY family transposase ISSen7 | VF |
| N0F11_RS21905 (4374216) | 4374216..4375448 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| N0F11_RS21910 (4375489) | 4375489..4376760 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| N0F11_RS21915 (4376876) | 4376876..4378027 | + | 1152 | WP_001302931.1 | double-cubane-cluster-containing anaerobic reductase | - |
| N0F11_RS21920 (4378037) | 4378037..4378804 | + | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| N0F11_RS21925 (4378801) | 4378801..4379067 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| N0F11_RS21930 (4379379) | 4379379..4381580 | + | 2202 | WP_085562135.1 | hypothetical protein | VF |
| N0F11_RS21935 (4381846) | 4381846..4382688 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| N0F11_RS21940 (4382756) | 4382756..4383934 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |